Project measure / variable:   CSNA03   antici_resp_left_do_acq_JAX

ID, description, units MPD:110539   antici_resp_left_do_acq_JAX   total number of anticipatory responses in left flanking hole without prior successful nose poke in central hole (reversal learning assay), DO   [n]  acquisition  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age:
Procedure operant conditioning chamber
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means77.51   n 206.3   n
Median of the strain means47.429   n 44.5   n
SD of the strain means± 59.72 ± 451.5
Coefficient of variation (CV)0.7704 2.1888
Min–max range of strain means26.333   –   199.8   n 9.5   –   1400.0   n
Mean sample size per strain31.9   mice 23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 290460.2524 290460.2524 1.2736 0.2597
strain 8 6717428.4703 839678.5588 3.6818 0.0003
sex:strain 8 7647367.3854 955920.9232 4.1915 < 0.0001
Residuals 478 109013282.8919 228061.2613


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 138.7 233.3   3 134.7 1.6821 2.0, 408.0 1.02
129S1/SvImJ m 49.5 86.8   4 43.398 1.7535 -0.35
A/J f 199.8 122.9   6 50.19 0.6152 3.0, 303.0 2.05
A/J m 208.6 149.4   5 66.82 0.7163 30.0, 384.0 0.01
C57BL/6J f 47.714 38.321   14 10.242 0.8031 1.0, 134.0 -0.5
C57BL/6J m 23.545 27.721   11 8.3583 1.1774 -0.4
CAST/EiJ f 37.1 41.893   10 13.248 1.1292 5.0, 126.0 -0.68
CAST/EiJ m 44.5 58.42   8 20.655 1.3129 -0.36
J:DO f 47.429 56.12   226 3.7328 1.1831 -0.5
J:DO m 48.922 63.1   154 5.0844 1.2897 -0.35
NOD/ShiLtJ f 46.375 52.39   8 18.523 1.1297 -0.52
NOD/ShiLtJ m 38.818 50.89   11 15.344 1.311 1.0, 166.0 -0.37
NZO/HlLtJ f 26.333 34.79   3 20.086 1.3211 1.0, 66.0 -0.86
NZO/HlLtJ m 9.5 0.70711   2   0.5 0.0744 9.0, 10.0 -0.44
PWK/PhJ f 39.556 88.65   9 29.55 2.2412 -0.64
PWK/PhJ m 1400.0 3908.0   8 1382.0 2.7909 1.0, 11072.0 2.64
WSB/EiJ f 114.6 208.2   8 73.6 1.816 5.0, 622.0 0.62
WSB/EiJ m 33.0 46.708   6 19.068 1.4154 1.0, 116.0 -0.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 138.6666666667 275.7180088907 680.435810238 -403.1024769046
129S1/SvImJ m 49.5 238.7787999803 518.6858413193 -419.6858413193
A/J f 199.8333333333 194.9620737819 582.9219685902 -183.2553019236
A/J m 208.6 213.5702513367 628.2525741081 -211.0525741081
C57BL/6J f 47.7142857143 127.6326372502 298.5046669917 -203.0760955632
C57BL/6J m 23.5454545455 143.9890340774 306.4751622915 -259.3842532006
CAST/EiJ f 37.1 151.0169729799 333.8391808943 -259.6391808943
CAST/EiJ m 44.5 168.8421086696 376.2644900336 -287.2644900336
J:DO f 47.4292035398 31.7666590175 109.8487593725 -14.9903522928
J:DO m 48.9220779221 38.4826880693 124.5382229882 -26.6940671441
NOD/ShiLtJ f 46.375 168.8421086696 378.1394900336 -285.3894900336
NOD/ShiLtJ m 38.8181818182 143.9890340774 321.7478895642 -244.1115259279
NZO/HlLtJ f 26.3333333333 275.7180088907 568.1024769046 -515.435810238
NZO/HlLtJ m 9.5 337.6842173392 673.0289800672 -654.0289800672
PWK/PhJ f 39.5555555556 159.1858666535 352.3461164351 -273.235005324
PWK/PhJ m 1400.25 168.8421086696 1732.0144900336 1068.4855099664
WSB/EiJ f 114.625 168.8421086696 446.3894900336 -217.1394900336
WSB/EiJ m 33.0 194.9620737819 416.0886352569 -350.0886352569


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 94.0833333333 182.3703208767 452.4299388079 -264.2632721412
A/J both 204.2166666667 144.5877436622 488.3228023882 -79.8894690549
C57BL/6J both 35.6298701299 96.2067201733 224.6702327952 -153.4104925355
CAST/EiJ both 40.8 113.2627297349 263.3543856707 -181.7543856707
J:DO both 48.175640731 24.9501398101 97.201150277 -0.8498688151
NOD/ShiLtJ both 42.5965909091 110.9510022426 260.6085724448 -175.4153906266
NZO/HlLtJ both 17.9166666667 217.9742250053 446.2227815877 -410.3894482544
PWK/PhJ both 719.9027777778 116.0256413495 947.8861169841 491.9194385715
WSB/EiJ both 73.8125 128.9552905791 327.2018147462 -179.5768147462




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA