Project measure / variable:   CSNA03   reward_time_do_acq_JAX

ID, description, units MPD:110537   reward_time_do_acq_JAX   latency to retrieve reward per total correct responses (reversal learning assay), DO   [centiseconds/n]  acquisition  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means193.8   centiseconds/n 201.2   centiseconds/n
Median of the strain means197.0   centiseconds/n 189.7   centiseconds/n
SD of the strain means± 49.891 ± 48.827
Coefficient of variation (CV)0.2575 0.2427
Min–max range of strain means119.9   –   265.9   centiseconds/n 125.5   –   255.9   centiseconds/n
Mean sample size per strain31.9   mice 23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1014.5764 1014.5764 0.2466 0.6197
strain 8 255413.1528 31926.6441 7.7585 < 0.0001
sex:strain 8 23798.196 2974.7745 0.7229 0.6714
Residuals 478 1967000.1417 4115.0631


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 175.6 41.472   3 23.944 0.2362 134.9, 217.8 -0.36
129S1/SvImJ m 173.6 54.79   4 27.393 0.3155 95.22, 213.4 -0.57
A/J f 265.9 81.69   6 33.349 0.3072 160.9, 358.4 1.45
A/J m 244.1 58.25   5 26.049 0.2386 184.6, 323.6 0.88
C57BL/6J f 244.1 63.86   14 17.067 0.2616 149.5, 365.1 1.01
C57BL/6J m 253.7 80.42   11 24.247 0.3169 135.1, 442.6 1.08
CAST/EiJ f 201.1 22.808   10 7.2126 0.1134 160.8, 237.7 0.15
CAST/EiJ m 255.9 54.99   8 19.441 0.2149 158.0, 314.1 1.12
J:DO f 197.0 67.36   226 4.4808 0.342 85.43, 584.4 0.06
J:DO m 189.7 64.55   154 5.2015 0.3404 72.5, 455.2 -0.24
NOD/ShiLtJ f 119.9 34.203   8 12.093 0.2853 88.26, 194.7 -1.48
NOD/ShiLtJ m 149.2 64.07   11 19.318 0.4294 86.43, 304.6 -1.06
NZO/HlLtJ f 131.9 23.565   3 13.605 0.1787 108.8, 155.9 -1.24
NZO/HlLtJ m 125.5 45.92   2   32.47 0.3658 93.06, 158.0 -1.55
PWK/PhJ f 238.0 60.04   9 20.013 0.2523 141.2, 330.8 0.89
PWK/PhJ m 241.3 42.209   8 14.923 0.1749 164.2, 319.2 0.82
WSB/EiJ f 170.5 32.812   8 11.601 0.1925 134.9, 224.4 -0.47
WSB/EiJ m 177.8 29.503   6 12.045 0.1659 149.6, 225.7 -0.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 175.5666666667 37.0363022716 248.340751477 102.7925818564
129S1/SvImJ m 173.63 32.0743786295 236.6542061829 110.6057938171
A/J f 265.9166666667 26.1886204863 317.3757155307 214.4576178027
A/J m 244.08 28.6881963806 300.4505637011 187.7094362989
C57BL/6J f 244.1285714286 17.1444765322 277.8164266585 210.4407161986
C57BL/6J m 253.7454545455 19.3415780541 291.7504808397 215.7404282512
CAST/EiJ f 201.14 20.2856182007 241.0000078524 161.2799921476
CAST/EiJ m 255.9 22.6800106312 300.4648435708 211.3351564292
J:DO f 196.9699115044 4.2671118592 205.3545271731 188.5852958358
J:DO m 189.6534415584 5.1692541713 199.8107120848 179.4961710321
NOD/ShiLtJ f 119.89125 22.6800106312 164.4560935708 75.3264064292
NOD/ShiLtJ m 149.2181818182 19.3415780541 187.2232081125 111.2131555239
NZO/HlLtJ f 131.8666666667 37.0363022716 204.640751477 59.0925818564
NZO/HlLtJ m 125.53 45.3600212625 214.6596871416 36.4003128584
PWK/PhJ f 238.0111111111 21.3829190863 280.0272485664 195.9949736559
PWK/PhJ m 241.35 22.6800106312 285.9148435708 196.7851564292
WSB/EiJ f 170.45 22.6800106312 215.0148435708 125.8851564292
WSB/EiJ m 177.8333333333 26.1886204863 229.2923821973 126.3742844693


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 174.5983333333 24.497211323 222.7338659079 126.4628007588
A/J both 254.9983333333 19.422000763 293.1613853666 216.8352813001
C57BL/6J both 248.937012987 12.9231354282 274.3301893028 223.5438366712
CAST/EiJ both 228.52 15.2142136506 258.4150058893 198.6249941107
J:DO both 193.3116765314 3.3514710317 199.8971135795 186.7262394834
NOD/ShiLtJ both 134.5547159091 14.9036868245 163.8395554431 105.2698763751
NZO/HlLtJ both 128.6983333333 29.2797678222 186.231298992 71.1653676746
PWK/PhJ both 239.6805555556 15.5853465705 270.3048150942 209.056296017
WSB/EiJ both 174.1416666667 17.3221442467 208.1786281662 140.1047051672




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA