Project measure / variable:   CSNA03   trial_init_latency_do_rev_JAX

ID, description, units MPD:110534   trial_init_latency_do_rev_JAX   mean latency across trials between illumination of central hole and initiation of trial (reversal learning assay), DO   [centiseconds/n]  reversal  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means528.7   centiseconds/n 569.5   centiseconds/n
Median of the strain means480.8   centiseconds/n 537.1   centiseconds/n
SD of the strain means± 354.1 ± 205.5
Coefficient of variation (CV)0.6697 0.3608
Min–max range of strain means193.6   –   1365.0   centiseconds/n 316.7   –   915.5   centiseconds/n
Mean sample size per strain32.0   mice 23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 689866.1473 689866.1473 2.8763 0.0905
strain 8 5240055.1803 655006.8975 2.7309 0.0059
sex:strain 8 1303899.9026 162987.4878 0.6795 0.7097
Residuals 479 114887312.5305 239848.2516


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1365.0 1287.0   3 743.3 0.9434 230.2, 2764.0 2.36
129S1/SvImJ m 915.5 643.7   4 321.8 0.7031 222.0, 1692.0 1.68
A/J f 502.3 237.6   6 97.01 0.4731 256.1, 895.3 -0.07
A/J m 852.4 883.9   5 395.3 1.0369 241.6, 2321.0 1.38
C57BL/6J f 439.8 193.8   14 51.8 0.4407 136.0, 771.2 -0.25
C57BL/6J m 443.3 221.5   11 66.8 0.4998 99.91, 703.8 -0.61
CAST/EiJ f 193.6 75.27   10 23.804 0.3888 97.54, 296.8 -0.95
CAST/EiJ m 316.7 211.5   8 74.77 0.6678 95.8, 792.0 -1.23
J:DO f 480.8 471.2   227 31.276 0.9801 32.575, 3146.0 -0.14
J:DO m 558.9 550.2   154 44.338 0.9844 43.237, 2805.0 -0.05
NOD/ShiLtJ f 243.3 178.3   8 63.03 0.7328 49.208, 548.9 -0.81
NOD/ShiLtJ m 347.0 318.1   11 95.92 0.917 57.89, 1179.0 -1.08
NZO/HlLtJ f 533.6 539.6   3 311.6 1.0113 173.2, 1154.0 0.01
NZO/HlLtJ m 516.5 535.1   2   378.4 1.0358 138.2, 894.9 -0.26
PWK/PhJ f 279.5 147.1   9 49.032 0.5264 79.35, 497.6 -0.7
PWK/PhJ m 638.4 504.2   8 178.2 0.7897 63.46, 1388.0 0.34
WSB/EiJ f 720.4 750.7   8 265.4 1.0421 49.806, 2406.0 0.54
WSB/EiJ m 537.1 464.1   6 189.5 0.8642 150.6, 1416.0 -0.16


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1364.7333333333 282.7532797507 1920.3234126921 809.1432539746
129S1/SvImJ m 915.525 244.8715232675 1396.6801228153 434.3698771847
A/J f 502.2666666667 199.9367615145 895.1281793412 109.4051539921
A/J m 852.44 219.019748712 1282.7982249349 422.0817750651
C57BL/6J f 439.7857142857 130.8893348349 696.973945638 182.5974829334
C57BL/6J m 443.2554545455 147.6630844584 733.4029106065 153.1079984844
CAST/EiJ f 193.594 154.870349528 497.9032191909 -110.7152191909
CAST/EiJ m 316.7 173.1503146219 656.9280501453 -23.5280501453
J:DO f 480.7930352423 32.5053876679 544.6638095439 416.9222609406
J:DO m 558.9354350649 39.464619337 636.4806045095 481.3902656203
NOD/ShiLtJ f 243.301 173.1503146219 583.5290501453 -96.9270501453
NOD/ShiLtJ m 346.9509090909 147.6630844584 637.0983651519 56.8034530299
NZO/HlLtJ f 533.6 282.7532797507 1089.1900793588 -21.9900793588
NZO/HlLtJ m 516.55 346.3006292439 1197.0061002907 -163.9061002907
PWK/PhJ f 279.4611111111 163.2476821783 600.231192988 -41.3089707658
PWK/PhJ m 638.3825 173.1503146219 978.6105501453 298.1544498547
WSB/EiJ f 720.40075 173.1503146219 1060.6288001453 380.1726998547
WSB/EiJ m 537.1 199.9367615145 929.9615126745 144.2384873254


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1140.1291666667 187.0237151521 1507.6174618861 772.6408714472
A/J both 677.3533333333 148.2770708259 968.7072289268 385.9994377398
C57BL/6J both 441.5205844156 98.6615483424 635.3835080271 247.6576608041
CAST/EiJ both 255.147 116.152762146 483.3789143932 26.9150856068
J:DO both 519.8642351536 25.5639218766 570.0955229982 469.6329473091
NOD/ShiLtJ both 295.1259545455 113.7820481946 518.699584679 71.5523244119
NZO/HlLtJ both 525.075 223.5360949738 964.3075240418 85.8424759582
PWK/PhJ both 458.9218055556 118.9861727159 692.7211701468 225.1224409644
WSB/EiJ both 628.750375 132.2457372267 888.6038405564 368.8969094436




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA