Project measure / variable:   CSNA03   latency_do_acq_JAX

ID, description, units MPD:110531   latency_do_acq_JAX   latency (reversal learning assay), DO    acquisition   informational
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means80435.0   None 53446.0   None
Median of the strain means43167.0   None 39288.0   None
SD of the strain means± 99564.0 ± 49246.0
Coefficient of variation (CV)1.2378 0.9214
Min–max range of strain means14936.0   –   324832.0   None 2474.0   –   170429.0   None
Mean sample size per strain31.9   mice 23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2877514360.5006 2877514360.5006 0.6615 0.4164
strain 8 280920430143.9393 35115053767.9924 8.0723 < 0.0001
sex:strain 8 132215823502.5723 16526977937.8215 3.7992 0.0002
Residuals 478 2079337117920.5925 4350077652.5535


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 324832.0 129939.0   3 75021.0 0.4 174793.0, 400532.0 2.45
129S1/SvImJ m 76060.0 96447.0   4 48223.0 1.268 6291.0, 212026.0 0.46
A/J f 147092.0 74430.0   6 30386.0 0.506 4199.0, 203725.0 0.67
A/J m 170429.0 69324.0   5 31003.0 0.4068 82853.0, 239051.0 2.38
C57BL/6J f 47138.0 34984.0   14 9350.0 0.7422 2097.0, 122687.0 -0.33
C57BL/6J m 19802.0 17395.0   11 5245.0 0.8785 628.0, 65383.0 -0.68
CAST/EiJ f 24792.0 20647.0   10 6529.0 0.8328 5120.0, 71206.0 -0.56
CAST/EiJ m 62037.0 67270.0   8 23783.0 1.0843 2068.0, 172775.0 0.17
J:DO f 43167.0 67300.0   226 4477.0 1.5591 438.0, 496495.0 -0.37
J:DO m 52500.0 72507.0   154 5843.0 1.3811 891.0, 400377.0 -0.02
NOD/ShiLtJ f 23838.0 37901.0   8 13400.0 1.59 2799.0, 114609.0 -0.57
NOD/ShiLtJ m 32787.0 37744.0   11 11380.0 1.1512 1973.0, 114619.0 -0.42
NZO/HlLtJ f 42939.0 63657.0   3 36753.0 1.4825 4747.0, 116425.0 -0.38
NZO/HlLtJ m 2474.0 958.8   2   678.0 0.3876 1796.0, 3152.0 -1.04
PWK/PhJ f 14936.0 14308.0   9 4769.0 0.9579 2340.0, 49489.0 -0.66
PWK/PhJ m 39288.0 51170.0   8 18091.0 1.3024 1896.0, 153359.0 -0.29
WSB/EiJ f 55182.0 73848.0   8 26109.0 1.3383 4095.0, 198877.0 -0.25
WSB/EiJ m 25641.0 21314.0   6 8701.0 0.8312 6081.0, 54991.0 -0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 324831.999999996 38079.2054037959 399655.3261312413 250008.6738687507
129S1/SvImJ m 76059.4999999958 32977.5592356139 140858.4012253042 11260.5987746874
A/J f 147092.3333333355 26926.0643632202 200000.4146316731 94184.2520349979
A/J m 170429.1999999992 29496.0256731426 228387.099202831 112471.3007971674
C57BL/6J f 47137.642857143 17627.2468731011 81774.1124892153 12501.1732250708
C57BL/6J m 19802.0000000009 19886.2164520452 58877.207671209 -19273.2076712071
CAST/EiJ f 24791.799999998 20856.8397715314 65774.2235496464 -16190.6235496504
CAST/EiJ m 62037.3749999971 23318.6557624833 107857.1174698492 16217.6325301449
J:DO f 43166.7345132743 4387.2692196843 51787.4520983447 34546.0169282039
J:DO m 52500.3246753248 5314.8149059128 62943.6132055176 42057.036145132
NOD/ShiLtJ f 23837.7500000001 23318.6557624832 69657.492469852 -21981.9924698518
NOD/ShiLtJ m 32787.3636363638 19886.2164520452 71862.5713075719 -6287.8440348443
NZO/HlLtJ f 42938.9999999996 38079.2054037961 117762.3261312453 -31884.3261312462
NZO/HlLtJ m 2474.0000000013 46637.3115249664 94113.4849397052 -89165.4849397025
PWK/PhJ f 14936.2222222225 21985.0394904089 58135.4897057607 -28263.0452613157
PWK/PhJ m 39287.5000000008 23318.6557624832 85107.2424698528 -6532.2424698512
WSB/EiJ f 55181.5000000001 23318.6557624832 101001.2424698521 9361.7575301481
WSB/EiJ m 25640.6666666669 26926.0643632199 78548.7479650038 -27267.4146316699


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 200445.7499999959 25187.0269053479 249936.7283024851 150954.7716975066
A/J both 158760.7666666674 19968.9037793952 197998.4499146534 119523.0834186813
C57BL/6J both 33469.821428572 13287.0372647823 59578.0427540545 7361.6001030895
CAST/EiJ both 43414.5874999975 15642.6298286487 74151.405162234 12677.7698377611
J:DO both 47833.5295942995 3445.844914172 54604.4055901806 41062.6535984185
NOD/ShiLtJ both 28312.556818182 15323.3588953824 58422.0264853464 -1796.9128489825
NZO/HlLtJ both 22706.5000000004 30104.255141347 81859.5331710834 -36446.5331710825
PWK/PhJ both 27111.8611111116 16024.213459356 58598.4674347449 -4374.7452125216
WSB/EiJ both 40411.0833333335 17809.9175226996 75406.4896985802 5415.6769680869




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA