Project measure / variable:   CSNA03   total_time_do_rev_JAX

ID, description, units MPD:110530   total_time_do_rev_JAX   total time for all trials (reversal learning assay), DO   [min]  reversal  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means229.9   min 293.5   min
Median of the strain means230.5   min 293.8   min
SD of the strain means± 88.69 ± 100.5
Coefficient of variation (CV)0.3858 0.3425
Min–max range of strain means100.6   –   343.6   min 169.7   –   514.2   min
Mean sample size per strain32.0   mice 23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 719423.2833 719423.2833 7.5768 0.0061
strain 8 997425.5622 124678.1953 1.3131 0.2345
sex:strain 8 92346.7302 11543.3413 0.1216 0.9984
Residuals 479 45481458.7168 94950.8533


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 302.8 239.7   3 138.4 0.7918 28.168, 470.4 0.82
129S1/SvImJ m 309.5 265.2   4 132.6 0.8567 81.27, 636.4 0.16
A/J f 340.2 316.1   6 129.0 0.929 111.0, 949.7 1.24
A/J m 514.2 489.8   5 219.0 0.9524 94.58, 1140.0 2.2
C57BL/6J f 230.5 219.0   14 58.53 0.9502 41.678, 897.7 0.01
C57BL/6J m 293.8 258.0   11 77.8 0.8782 60.0, 812.8 0.0
CAST/EiJ f 133.9 69.93   10 22.113 0.5222 29.03, 258.8 -1.08
CAST/EiJ m 238.0 291.9   8 103.2 1.2264 46.995, 876.0 -0.55
J:DO f 253.4 294.6   227 19.551 1.1623 14.415, 2265.0 0.27
J:DO m 339.6 359.1   154 28.934 1.0572 19.003, 2084.0 0.46
NOD/ShiLtJ f 100.6 61.19   8 21.633 0.6079 23.578, 211.2 -1.46
NOD/ShiLtJ m 169.7 143.4   11 43.229 0.845 30.97, 467.4 -1.23
NZO/HlLtJ f 155.3 120.4   3 69.54 0.7758 77.36, 294.0 -0.84
NZO/HlLtJ m 188.2 186.8   2   132.1 0.9927 56.1, 320.3 -1.05
PWK/PhJ f 208.4 250.7   9 83.57 1.2032 75.78, 870.9 -0.24
PWK/PhJ m 283.4 182.1   8 64.39 0.6427 33.307, 515.0 -0.1
WSB/EiJ f 343.6 280.3   8 99.09 0.8158 78.44, 897.8 1.28
WSB/EiJ m 305.1 412.2   6 168.3 1.3513 31.798, 1125.0 0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 302.756 177.9052681166 652.3271954902 -46.8151954902
129S1/SvImJ m 309.4925 154.0704816561 612.2300357258 6.7549642742
A/J f 340.2166666667 125.7980214941 587.4008295053 93.032503828
A/J m 514.236 137.8048281236 785.0126836895 243.4593163105
C57BL/6J f 230.4655714286 82.3541365389 392.2855909718 68.6455518854
C57BL/6J m 293.82 92.9079961677 476.3776029017 111.2623970983
CAST/EiJ f 133.921 97.4427284465 325.389029224 -57.547029224
CAST/EiJ m 238.001875 108.9442823597 452.0696394314 23.9341105686
J:DO f 253.4310352423 20.4520340609 293.6178271938 213.2442432908
J:DO m 339.629038961 24.8307064394 388.4196106331 290.838467289
NOD/ShiLtJ f 100.6475 108.9442823597 314.7152644314 -113.4202644314
NOD/ShiLtJ m 169.6734545455 92.9079961677 352.2310574472 -12.8841483563
NZO/HlLtJ f 155.2666666667 177.9052681166 504.8378621569 -194.3045288236
NZO/HlLtJ m 188.2 217.8885647194 616.3355288629 -239.9355288629
PWK/PhJ f 208.3755555556 102.7136544374 410.2005793728 6.5505317383
PWK/PhJ m 283.375875 108.9442823597 497.4436394314 69.3081105686
WSB/EiJ f 343.5675 108.9442823597 557.6352644314 129.4997355686
WSB/EiJ m 305.068 125.7980214941 552.2521628386 57.8838371614


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 306.12425 117.6732740912 537.3438621947 74.9046378053
A/J both 427.2263333333 93.2943096684 610.5430147811 243.9096518855
C57BL/6J both 262.1427857143 62.0767660985 384.1192148945 140.1663565341
CAST/EiJ both 185.9614375 73.0820463349 329.562459418 42.360415582
J:DO both 296.5300371017 16.0845397782 328.1350134956 264.9250607077
NOD/ShiLtJ both 135.1604772727 71.5904190705 275.8305577322 -5.5096031867
NZO/HlLtJ both 171.7333333333 140.6464637479 448.0936288676 -104.6269622009
PWK/PhJ both 245.8757152778 74.864797246 392.9797159096 98.771714646
WSB/EiJ both 324.31775 83.2075700743 487.8147057262 160.8207942738




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA