Project measure / variable:   CSNA03   total_time_do_acq_JAX

ID, description, units MPD:110529   total_time_do_acq_JAX   total time for all trials (reversal learning assay), DO   [min]  acquisition  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means228.1   min 175.4   min
Median of the strain means139.3   min 136.3   min
SD of the strain means± 229.5 ± 147.5
Coefficient of variation (CV)1.0061 0.8408
Min–max range of strain means62.79   –   763.2   min 19.165   –   530.9   min
Mean sample size per strain32.0   mice 23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 43381.0097 43381.0097 1.407 0.2361
strain 8 1921415.5223 240176.9403 7.7896 < 0.0001
sex:strain 8 740307.729 92538.4661 3.0013 0.0027
Residuals 479 14768940.1047 30832.8603


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 763.2 331.8   3 191.5 0.4347 385.6, 1008.0 2.33
129S1/SvImJ m 207.0 250.0   4 125.0 1.2079 24.352, 558.8 0.21
A/J f 442.0 211.8   6 86.46 0.4791 32.177, 596.8 0.93
A/J m 530.9 236.9   5 105.9 0.4462 292.9, 819.9 2.41
C57BL/6J f 150.9 93.61   14 25.017 0.6202 13.457, 325.1 -0.34
C57BL/6J m 85.03 58.29   11 17.575 0.6855 7.768, 219.2 -0.61
CAST/EiJ f 111.4 78.75   10 24.903 0.7066 20.858, 264.3 -0.51
CAST/EiJ m 221.1 209.6   8 74.09 0.9477 18.327, 539.2 0.31
J:DO f 139.3 172.6   227 11.453 1.2391 6.635, 1196.0 -0.39
J:DO m 167.9 195.2   154 15.734 1.163 9.595, 1018.0 -0.05
NOD/ShiLtJ f 93.68 127.1   8 44.946 1.357 13.723, 397.8 -0.59
NOD/ShiLtJ m 124.8 125.0   11 37.7 1.0017 13.477, 412.8 -0.34
NZO/HlLtJ f 109.4 138.5   3 79.98 1.2663 26.16, 269.3 -0.52
NZO/HlLtJ m 19.165 6.5082   2   4.602 0.3396 14.563, 23.767 -1.06
PWK/PhJ f 62.79 49.659   9 16.553 0.7909 15.485, 165.2 -0.72
PWK/PhJ m 136.3 169.4   8 59.88 1.2429 15.848, 524.9 -0.27
WSB/EiJ f 180.2 204.4   8 72.25 1.1341 35.002, 630.2 -0.21
WSB/EiJ m 86.71 61.88   6 25.262 0.7136 32.182, 165.9 -0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 763.2 101.378597912 962.4017327221 563.9982672779
129S1/SvImJ m 206.99975 87.7964411918 379.5135110152 34.4859889848
A/J f 442.0128333333 71.6854940507 582.8697293652 301.1559373014
A/J m 530.88 78.527524275 685.1809986736 376.5790013263
C57BL/6J f 150.9221428571 46.9291718168 243.134626889 58.7096588253
C57BL/6J m 85.0340909091 52.9432460658 189.0638029928 -18.9956211746
CAST/EiJ f 111.4441 55.5273449246 220.551382506 2.336817494
CAST/EiJ m 221.13025 62.0814589308 343.1159002618 99.1445997382
J:DO f 139.2543127753 11.6545089389 162.1545937268 116.3540318238
J:DO m 167.8766298701 14.1496776944 195.6797399174 140.0735198228
NOD/ShiLtJ f 93.6805 62.0814589308 215.6661502618 -28.3051502618
NOD/ShiLtJ m 124.8304545455 52.9432460658 228.8601666292 20.8007424617
NZO/HlLtJ f 109.3943333334 101.378597912 308.5960660554 -89.8073993887
NZO/HlLtJ m 19.165 124.1629178616 263.1363005237 -224.8063005237
PWK/PhJ f 62.7886666667 58.5309607945 177.7978406768 -52.2205073435
PWK/PhJ m 136.270375 62.0814589308 258.2560252618 14.2847247382
WSB/EiJ f 180.1915 62.0814589308 302.1771502618 58.2058497382
WSB/EiJ m 86.7106666667 71.6854940507 227.5675626986 -54.1462293652


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 485.099875 67.0556395849 616.8594363789 353.3403136211
A/J both 486.4464166667 53.1633852526 590.9086865915 381.9841467418
C57BL/6J both 117.9781168831 35.374194236 187.4858920013 48.4703417649
CAST/EiJ both 166.287175 41.6455086935 248.1176368795 84.4567131205
J:DO both 153.5654713227 9.1657099761 171.575439368 135.5555032775
NOD/ShiLtJ both 109.2554772727 40.7955109263 189.4157540094 29.095200536
NZO/HlLtJ both 64.2796666667 80.1468188491 221.7624639801 -93.2031306468
PWK/PhJ both 99.5295208333 42.661402094 183.3561409732 15.7029006935
WSB/EiJ both 133.4510833333 47.4154974673 226.6191626705 40.2830039961




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA