Project measure / variable:   CSNA03   omit_do_rev_JAX

ID, description, units MPD:110524   omit_do_rev_JAX   total number of omissions (successful response in central nose poke hole, but no response in flanking hole within 30 s) (reversal learning assay), DO   [n]  reversal  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means19.186   n 28.222   n
Median of the strain means19.786   n 26.481   n
SD of the strain means± 10.294 ± 12.883
Coefficient of variation (CV)0.5365 0.4565
Min–max range of strain means7.4   –   37.125   n 10.5   –   52.8   n
Mean sample size per strain32.0   mice 23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2689.6826 2689.6826 3.1138 0.0783
strain 8 13845.1452 1730.6431 2.0035 0.0444
sex:strain 8 2343.9323 292.9915 0.3392 0.9505
Residuals 479 413761.7027 863.8031


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 25.0 19.079   3 11.015 0.7632 3.0, 37.0 0.56
129S1/SvImJ m 36.75 30.642   4 15.321 0.8338 8.0, 73.0 0.66
A/J f 29.0 28.362   6 11.579 0.978 9.0, 81.0 0.95
A/J m 52.8 53.31   5 23.84 1.0096 2.0, 132.0 1.91
C57BL/6J f 19.786 20.748   14 5.5452 1.0486 1.0, 72.0 0.06
C57BL/6J m 35.0 31.875   11 9.6106 0.9107 5.0, 96.0 0.53
CAST/EiJ f 7.4 5.2957   10 1.6746 0.7156 1.0, 16.0 -1.14
CAST/EiJ m 17.875 25.38   8 8.973 1.4198 3.0, 74.0 -0.8
J:DO f 22.921 31.439   227 2.0867 1.3716 0.36
J:DO m 26.481 28.932   154 2.3314 1.0926 -0.14
NOD/ShiLtJ f 9.0 7.3872   8 2.6118 0.8208 -0.99
NOD/ShiLtJ m 18.091 13.479   11 4.0642 0.7451 1.0, 40.0 -0.79
NZO/HlLtJ f 13.667 5.0332   3 2.9059 0.3683 9.0, 19.0 -0.54
NZO/HlLtJ m 22.0 21.213   2   15.0 0.9642 7.0, 37.0 -0.48
PWK/PhJ f 8.7778 8.7433   9 2.9144 0.9961 -1.01
PWK/PhJ m 10.5 9.5618   8 3.3806 0.9107 1.0, 30.0 -1.38
WSB/EiJ f 37.125 34.836   8 12.316 0.9383 2.0, 95.0 1.74
WSB/EiJ m 34.5 45.637   6 18.631 1.3228 0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 25.0 16.9686292627 58.3421493359 -8.3421493359
129S1/SvImJ m 36.75 14.6952640089 65.6251483417 7.8748516583
A/J f 29.0 11.9986328191 52.5764598948 5.4235401052
A/J m 52.8 13.1438437085 78.626717821 26.973282179
C57BL/6J f 19.7857142857 7.8549490185 35.2201302981 4.3512982733
C57BL/6J m 35.0 8.8615776205 52.4123696028 17.5876303972
CAST/EiJ f 7.4 9.2941010171 25.662247307 -10.862247307
CAST/EiJ m 17.875 10.391120832 38.2928132002 -2.5428132002
J:DO f 22.9207048458 1.9507178586 26.7537266619 19.0876830298
J:DO m 26.4805194805 2.3683562402 31.1341710052 21.8268679558
NOD/ShiLtJ f 9.0 10.391120832 29.4178132002 -11.4178132002
NOD/ShiLtJ m 18.0909090909 8.8615776205 35.5032786937 0.6785394881
NZO/HlLtJ f 13.6666666667 16.9686292627 47.0088160026 -19.6754826693
NZO/HlLtJ m 22.0 20.782241664 62.8356264003 -18.8356264003
PWK/PhJ f 8.7777777778 9.7968426726 28.0278766722 -10.4723211167
PWK/PhJ m 10.5 10.391120832 30.9178132002 -9.9178132002
WSB/EiJ f 37.125 10.391120832 57.5428132002 16.7071867998
WSB/EiJ m 34.5 11.9986328191 58.0764598948 10.9235401052


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 30.875 11.2236932797 52.9287588298 8.8212411702
A/J both 40.9 8.898424256 58.3847706203 23.4152293797
C57BL/6J both 27.3928571429 5.9208906004 39.0269859545 15.7587283312
CAST/EiJ both 12.6375 6.9705757628 26.3341854802 -1.0591854802
J:DO both 24.7006121632 1.5341456453 27.7150992155 21.6861251108
NOD/ShiLtJ both 13.5454545455 6.8283041465 26.962586421 0.1283226699
NZO/HlLtJ both 17.8333333333 13.4148793103 44.1926168301 -8.5259501634
PWK/PhJ both 9.6388888889 7.1406147932 23.669688967 -4.3919111892
WSB/EiJ both 35.8125 7.936349628 51.4068624192 20.2181375808




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA