Project measure / variable:   CSNA03   days_criteria_do_rev_JAX

ID, description, units MPD:110518   days_criteria_do_rev_JAX   number of days to meet criteria, (reversal learning assay), DO   [n]  reversal  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means4.2226   n 5.2752   n
Median of the strain means4.2143   n 5.5   n
SD of the strain means± 1.4358 ± 1.6559
Coefficient of variation (CV)0.34 0.3139
Min–max range of strain means2.125   –   6.125   n 3.1818   –   8.8   n
Mean sample size per strain32.0   mice 23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 195.4424 195.4424 7.5353 0.0063
strain 8 271.7991 33.9749 1.3099 0.2361
sex:strain 8 21.4232 2.6779 0.1032 0.9991
Residuals 479 12423.7537 25.9369


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 5.3333 3.7859   3 2.1858 0.7099 1.0, 8.0 0.77
129S1/SvImJ m 5.5 4.3589   4 2.1794 0.7925 2.0, 11.0 0.14
A/J f 6.0 5.1769   6 2.1134 0.8628 2.0, 16.0 1.24
A/J m 8.8 8.1056   5 3.6249 0.9211 2.0, 19.0 2.13
C57BL/6J f 4.2143 3.534   14 0.9445 0.8386 1.0, 15.0 -0.01
C57BL/6J m 5.5455 4.0339   11 1.2163 0.7274 2.0, 14.0 0.16
CAST/EiJ f 2.7 1.2517   10 0.39581 0.4636 1.0, 5.0 -1.06
CAST/EiJ m 4.25 4.8624   8 1.7191 1.1441 1.0, 15.0 -0.62
J:DO f 4.6167 4.8617   227 0.32268 1.053 1.0, 38.0 0.27
J:DO m 6.0325 5.9589   154 0.48018 0.9878 1.0, 35.0 0.46
NOD/ShiLtJ f 2.125 0.99103   8 0.35038 0.4664 1.0, 4.0 -1.46
NOD/ShiLtJ m 3.1818 2.3587   11 0.71119 0.7413 1.0, 8.0 -1.26
NZO/HlLtJ f 3.0 1.7321   3 1.0 0.5774 2.0, 5.0 -0.85
NZO/HlLtJ m 3.5 3.5355   2   2.5 1.0102 1.0, 6.0 -1.07
PWK/PhJ f 3.8889 4.1966   9 1.3989 1.0791 2.0, 15.0 -0.23
PWK/PhJ m 5.0 3.0706   8 1.0856 0.6141 1.0, 9.0 -0.17
WSB/EiJ f 6.125 4.5493   8 1.6084 0.7427 2.0, 15.0 1.33
WSB/EiJ m 5.6667 6.7725   6 2.7649 1.1951 1.0, 19.0 0.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 5.3333333333 2.9403432544 11.1108986493 -0.4442319826
129S1/SvImJ m 5.5 2.5464119542 10.5035183357 0.4964816643
A/J f 6.0 2.0791366542 10.0853556137 1.9146443863
A/J m 8.8 2.2775800913 13.2752828501 4.3247171499
C57BL/6J f 4.2142857143 1.3611144426 6.8887787629 1.5397926656
C57BL/6J m 5.5454545455 1.5355441843 8.5626896275 2.5282194635
CAST/EiJ f 2.7 1.6104923273 5.864502851 -0.464502851
CAST/EiJ m 4.25 1.8005851605 7.7880217449 0.7119782551
J:DO f 4.6167400881 0.338022595 5.28093044 3.9525497362
J:DO m 6.0324675325 0.4103914457 6.8388575276 5.2260775373
NOD/ShiLtJ f 2.125 1.8005851605 5.6630217449 -1.4130217449
NOD/ShiLtJ m 3.1818181818 1.5355441843 6.1990532638 0.1645830998
NZO/HlLtJ f 3.0 2.9403432544 8.777565316 -2.777565316
NZO/HlLtJ m 3.5 3.601170321 10.5760434899 -3.5760434899
PWK/PhJ f 3.8888888889 1.6976079694 7.2245677793 0.5532099985
PWK/PhJ m 5.0 1.8005851605 8.5380217449 1.4619782551
WSB/EiJ f 6.125 1.8005851605 9.6630217449 2.5869782551
WSB/EiJ m 5.6666666667 2.0791366542 9.7520222803 1.581311053


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 5.4166666667 1.9448542551 9.238166919 1.5951664143
A/J both 7.4 1.5419290109 10.4297808121 4.3702191879
C57BL/6J both 4.8798701299 1.0259786143 6.8958451178 2.863895142
CAST/EiJ both 3.475 1.2078692454 5.8483771383 1.1016228617
J:DO both 5.3246038103 0.2658384911 5.8469575333 4.8022500873
NOD/ShiLtJ both 2.6534090909 1.183216259 4.9783448646 0.3284733172
NZO/HlLtJ both 3.25 2.3245454467 7.8175664322 -1.3175664322
PWK/PhJ both 4.4444444444 1.2373338008 6.8757173378 2.0131715511
WSB/EiJ both 5.8958333333 1.3752196322 8.5980420761 3.1936245906




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA