Project measure / variable:   CSNA03   antici_incorrect_cc_rev_JAX

ID, description, units MPD:110516   antici_incorrect_cc_rev_JAX   mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  reversal  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), CC reversal

CC074/UncJCC013/GeniUncJCC036/UncJCC057/UncJCC079/TauUncJA/JCC061/GeniUncJCC051/TauUncJCC012/GeniUncJCC041/TauUncJCC006/TauUncJCC011/UncJCC025/GeniUncJNZO/HlLtJCC033/GeniUncJCC059/TauUncJCC023/GeniUncJCC026/GeniUncJNOD/ShiLtJCC003/UncJCC002/UncJC57BL/6JCC004/TauUncJCC018/UncJCC084/TauJCC043/GeniUncJCC007/UncJCC019/TauUncJWSB/EiJCC001/UncJCC037/TauUncJCC027/GeniUncJCC060/UncJCC015/UncJCC008/GeniUncJ129S1/SvImJCC030/GeniUncJCC028/GeniUncJCC080/TauUncJCC005/TauUncJPWK/PhJCC032/GeniUncJCAST/EiJCC075/UncJCC016/GeniUncJCC040/TauUncJCC017/UncJCC029/UncJCC078/TauUncJCC044/UncJCC009/UncJCC035/UncJ n 024681012femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means1.2602   n 1.3762   n
Median of the strain means1.1048   n 0.99664   n
SD of the strain means± 0.70632 ± 1.7978
Coefficient of variation (CV)0.5605 1.3063
Min–max range of strain means0.32353   –   3.8661   n 0.18421   –   12.697   n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.2386 1.2386 2.2977 0.1312
strain 34 74.8962 2.2028 4.0865 < 0.0001
sex:strain 34 10.5378 0.3099 0.575 0.9715
Residuals 192 103.4977 0.5391


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 100 (100)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 0.65653 0.44716   3 0.25817 0.6811 0.28125, 1.1513 -0.85
129S1/SvImJ m 0.99664 0.64685   4 0.32342 0.649 0.47619, 1.9419 -0.21
A/J f 2.4085 1.4479   6 0.59111 0.6012 0.66667, 4.7075 1.63
A/J m 1.6482 1.189   5 0.53175 0.7214 0.4321, 3.2683 0.15
C57BL/6J f 1.2143 0.47591   14 0.12719 0.3919 0.39216, 2.1959 -0.07
C57BL/6J m 1.1659 0.64052   11 0.19312 0.5494 0.30387, 2.4034 -0.12
CAST/EiJ f 0.55994 0.71955   10 0.22754 1.285 0.1134, 2.4942 -0.99
CAST/EiJ m 0.72468 0.4893   8 0.17299 0.6752 0.16, 1.5068 -0.36
CC001/UncJ f 1.3744 1.3196   3 0.76189 0.9602 0.59444, 2.898 0.16
CC001/UncJ m 0.45534 0.19612   2   0.13868 0.4307 0.31667, 0.59402 -0.51
CC002/UncJ f 1.1398 0.68732   4 0.34366 0.603 0.376, 1.7755 -0.17
CC002/UncJ m 1.2826 0.92554   4 0.46277 0.7216 0.36364, 2.5326 -0.05
CC003/UncJ f 1.1802 0.92497   2   0.65405 0.7838 0.5261, 1.8342 -0.11
CC003/UncJ m 1.2426 0.87337   3 0.50424 0.7028 0.33099, 2.0719 -0.07
CC004/TauUncJ f 1.5956 0.0   1   0.0 0.0 1.5956, 1.5956 0.47
CC004/TauUncJ m 0.66678 0.2692   2   0.19036 0.4037 0.47643, 0.85714 -0.39
CC005/TauUncJ f 0.98846 0.49689   3 0.28688 0.5027 0.43269, 1.3898 -0.38
CC005/TauUncJ m 0.48718 0.56207   2   0.39744 1.1537 0.08974, 0.88462 -0.49
CC006/TauUncJ f 1.2824 1.0149   2   0.71765 0.7914 0.56471, 2.0 0.03
CC006/TauUncJ m 2.0177 1.3139   2   0.9291 0.6512 1.0886, 2.9468 0.36
CC007/UncJ f 1.009 0.0   1   0.0 0.0 1.009, 1.009 -0.36
CC008/GeniUncJ f 0.32353 0.0   1   0.0 0.0 0.32353, 0.32353 -1.33
CC008/GeniUncJ m 1.3659 0.0   1   0.0 0.0 1.3659, 1.3659 -0.01
CC009/UncJ f 0.38958 0.05825   2   0.04119 0.1495 0.34839, 0.43077 -1.23
CC009/UncJ m 0.23252 0.06279   2   0.0444 0.27 0.18812, 0.27692 -0.64
CC011/UncJ f 1.5404 0.48854   3 0.28206 0.3171 1.1014, 2.0667 0.4
CC011/UncJ m 1.7571 1.6007   3 0.92416 0.911 0.71345, 3.6 0.21
CC012/GeniUncJ f 0.70823 0.08303   3 0.04794 0.1172 0.63551, 0.7987 -0.78
CC012/GeniUncJ m 2.7045 0.0   1   0.0 0.0 2.7045, 2.7045 0.74
CC013/GeniUncJ f 3.0745 1.1244   2   0.7951 0.3657 2.2794, 3.8696 2.57
CC013/GeniUncJ m 3.3702 1.118   2   0.79055 0.3317 2.5797, 4.1608 1.11
CC015/UncJ f 1.5714 0.0   1   0.0 0.0 1.5714, 1.5714 0.44
CC015/UncJ m 0.18421 0.0   1   0.0 0.0 0.18421, 0.18421 -0.66
CC016/GeniUncJ f 0.64778 0.60968   3 0.352 0.9412 0.19492, 1.341 -0.87
CC016/GeniUncJ m 0.50118 0.30464   4 0.15232 0.6078 0.21053, 0.87826 -0.49
CC017/UncJ f 0.53946 0.184   2   0.1301 0.3411 0.40936, 0.66957 -1.02
CC017/UncJ m 0.58802 0.58551   3 0.33804 0.9957 0.15152, 1.2534 -0.44
CC018/UncJ f 1.5494 0.83392   3 0.48146 0.5382 0.92829, 2.4972 0.41
CC018/UncJ m 0.67206 0.01123   2   0.00794 0.0167 0.66412, 0.68 -0.39
CC019/TauUncJ f 1.1048 0.55319   4 0.27659 0.5007 0.29032, 1.5259 -0.22
CC019/TauUncJ m 0.85113 0.24168   4 0.12084 0.284 0.61875, 1.0723 -0.29
CC023/GeniUncJ f 1.2791 0.50524   2   0.35726 0.395 0.92188, 1.6364 0.03
CC023/GeniUncJ m 1.4521 0.0   1   0.0 0.0 1.4521, 1.4521 0.04
CC025/GeniUncJ f 1.8004 1.1613   3 0.67047 0.645 0.94118, 3.1216 0.76
CC025/GeniUncJ m 1.2952 0.95774   3 0.55295 0.7395 0.35119, 2.2661 -0.05
CC026/GeniUncJ f 0.92453 0.0   1   0.0 0.0 0.92453, 0.92453 -0.48
CC026/GeniUncJ m 1.7417 1.2964   2   0.9167 0.7443 0.825, 2.6584 0.2
CC027/GeniUncJ f 1.0159 0.07424   2   0.0525 0.0731 0.96341, 1.0684 -0.35
CC027/GeniUncJ m 0.77242 0.39623   4 0.19812 0.513 0.36585, 1.2635 -0.34
CC028/GeniUncJ f 0.97069 0.37632   3 0.21727 0.3877 0.53886, 1.2286 -0.41
CC028/GeniUncJ m 0.60552 0.34001   3 0.19631 0.5615 0.28049, 0.95876 -0.43
CC029/UncJ f 0.47917 0.0   1   0.0 0.0 0.47917, 0.47917 -1.11
CC029/UncJ m 0.5 0.0   1   0.0 0.0 0.5, 0.5 -0.49
CC030/GeniUncJ f 0.87876 0.43833   2   0.30994 0.4988 0.56881, 1.1887 -0.54
CC030/GeniUncJ m 0.71244 0.12   2   0.08486 0.1684 0.62759, 0.7973 -0.37
CC032/GeniUncJ f 0.64298 0.09928   2   0.0702 0.1544 0.57277, 0.71318 -0.87
CC033/GeniUncJ f 1.2638 1.084   2   0.76647 0.8577 0.49735, 2.0303 0.01
CC033/GeniUncJ m 1.6058 0.88684   2   0.62709 0.5523 0.97872, 2.2329 0.13
CC035/UncJ m 0.29889 0.0   1   0.0 0.0 0.29889, 0.29889 -0.6
CC036/UncJ f 2.1749 0.9757   3 0.56332 0.4486 1.1509, 3.0938 1.29
CC036/UncJ m 2.7515 1.3468   3 0.77756 0.4895 1.2299, 3.7903 0.76
CC037/TauUncJ f 0.987 0.05233   2   0.037 0.053 0.95, 1.024 -0.39
CC037/TauUncJ m 0.82111 0.66448   3 0.38363 0.8092 0.25, 1.5504 -0.31
CC040/TauUncJ f 0.60853 0.457   3 0.26385 0.751 0.1, 0.98485 -0.92
CC040/TauUncJ m 0.51921 0.32531   3 0.18782 0.6266 0.18927, 0.83969 -0.48
CC041/TauUncJ f 2.0736 1.3888   3 0.80182 0.6697 0.7, 3.4771 1.15
CC041/TauUncJ m 1.2625 0.51265   2   0.3625 0.4061 0.9, 1.625 -0.06
CC043/GeniUncJ f 1.0608 0.64651   2   0.45715 0.6095 0.6036, 1.5179 -0.28
CC043/GeniUncJ m 1.0356 0.58075   2   0.41065 0.5608 0.625, 1.4463 -0.19
CC044/UncJ f 0.39181 0.0   1   0.0 0.0 0.39181, 0.39181 -1.23
CC051/TauUncJ f 2.1818 0.0   1   0.0 0.0 2.1818, 2.1818 1.3
CC051/TauUncJ m 1.4726 0.0   1   0.0 0.0 1.4726, 1.4726 0.05
CC057/UncJ f 1.9584 0.14863   2   0.1051 0.0759 1.8533, 2.0635 0.99
CC057/UncJ m 2.3777 0.77485   2   0.5479 0.3259 1.8298, 2.9256 0.56
CC059/TauUncJ f 1.4065 0.63284   4 0.31642 0.45 0.68304, 2.2097 0.21
CC059/TauUncJ m 1.448 0.48555   5 0.21715 0.3353 0.98089, 2.1791 0.04
CC060/UncJ f 1.0678 0.0   1   0.0 0.0 1.0678, 1.0678 -0.27
CC060/UncJ m 0.70213 0.0   1   0.0 0.0 0.70213, 0.70213 -0.37
CC061/GeniUncJ f 1.5761 0.70583   3 0.40751 0.4478 1.1173, 2.3889 0.45
CC061/GeniUncJ m 2.3504 2.0254   2   1.4321 0.8617 0.91822, 3.7825 0.54
CC074/UncJ f 3.8661 0.0   1   0.0 0.0 3.8661, 3.8661 3.69
CC074/UncJ m 12.697 0.0   1   0.0 0.0 12.697, 12.697 6.3
CC075/UncJ f 0.83319 0.90794   2   0.64201 1.0897 0.19118, 1.4752 -0.6
CC075/UncJ m 0.37097 0.0   1   0.0 0.0 0.37097, 0.37097 -0.56
CC078/TauUncJ f 0.54369 0.29631   3 0.17108 0.545 0.2377, 0.82927 -1.01
CC078/TauUncJ m 0.3965 0.19676   3 0.1136 0.4962 0.26733, 0.62295 -0.54
CC079/TauUncJ f 2.584 0.0   1   0.0 0.0 2.584, 2.584 1.87
CC079/TauUncJ m 1.6279 0.95223   2   0.67333 0.5849 0.95455, 2.3012 0.14
CC080/TauUncJ f 1.0254 0.86408   2   0.61099 0.8427 0.41441, 1.6364 -0.33
CC080/TauUncJ m 0.48404 0.0   1   0.0 0.0 0.48404, 0.48404 -0.5
CC084/TauJ f 0.74357 0.596   2   0.42144 0.8015 0.32213, 1.165 -0.73
CC084/TauJ m 1.4093 0.01676   2   0.01185 0.0119 1.3974, 1.4211 0.02
NOD/ShiLtJ f 1.6595 0.90221   8 0.31898 0.5437 0.35849, 3.3 0.57
NOD/ShiLtJ m 0.98393 0.59974   11 0.18083 0.6095 0.2459, 1.9753 -0.22
NZO/HlLtJ f 1.5163 0.67815   3 0.39153 0.4472 0.7619, 2.0753 0.36
NZO/HlLtJ m 1.444 0.92467   2   0.65384 0.6404 0.79012, 2.0978 0.04
PWK/PhJ f 0.69945 0.53897   9 0.17966 0.7706 0.10092, 1.7101 -0.79
PWK/PhJ m 0.66832 0.5148   8 0.18201 0.7703 0.21212, 1.6471 -0.39
WSB/EiJ f 1.1997 0.55143   8 0.19496 0.4596 0.48649, 2.0638 -0.09
WSB/EiJ m 0.71489 0.45907   6 0.18741 0.6422 0.13559, 1.5092 -0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.65653 0.4238908835 1.4926108914 -0.1795508914
129S1/SvImJ m 0.99664 0.3671002736 1.7207072916 0.2725727084
A/J f 2.4085283333 0.2997361182 2.9997268013 1.8173298654
A/J m 1.64816 0.3283444665 2.2957854737 1.0005345263
C57BL/6J f 1.2142914286 0.19622335 1.6013216757 0.8272611814
C57BL/6J m 1.1658645455 0.2213697942 1.6024935507 0.7292355402
CAST/EiJ f 0.559944 0.2321745988 1.0178843641 0.1020036359
CAST/EiJ m 0.724675 0.2595790928 1.2366678919 0.2126821081
CC001/UncJ f 1.3743733333 0.4238908835 2.2104542247 0.5382924419
CC001/UncJ m 0.455345 0.5191581856 1.4793307838 -0.5686407838
CC002/UncJ f 1.1398325 0.3671002736 1.8638997916 0.4157652084
CC002/UncJ m 1.28264 0.3671002736 2.0067072916 0.5585727084
CC003/UncJ f 1.18015 0.5191581856 2.2041357838 0.1561642162
CC003/UncJ m 1.24263 0.4238908835 2.0787108914 0.4065491086
CC005/TauUncJ f 0.9884633333 0.4238908835 1.8245442247 0.1523824419
CC005/TauUncJ m 0.48718 0.5191581856 1.5111657838 -0.5368057838
CC006/TauUncJ f 1.282355 0.5191581856 2.3063407838 0.2583692162
CC006/TauUncJ m 2.0177 0.5191581856 3.0416857838 0.9937142162
CC009/UncJ f 0.38958 0.5191581856 1.4135657838 -0.6344057838
CC009/UncJ m 0.23252 0.5191581856 1.2565057838 -0.7914657838
CC011/UncJ f 1.5404 0.4238908835 2.3764808914 0.7043191086
CC011/UncJ m 1.7570666667 0.4238908835 2.5931475581 0.9209857753
CC013/GeniUncJ f 3.0745 0.5191581856 4.0984857838 2.0505142162
CC013/GeniUncJ m 3.37025 0.5191581856 4.3942357838 2.3462642162
CC016/GeniUncJ f 0.6477766667 0.4238908835 1.4838575581 -0.1883042247
CC016/GeniUncJ m 0.50118 0.3671002736 1.2252472916 -0.2228872916
CC017/UncJ f 0.539465 0.5191581856 1.5634507838 -0.4845207838
CC017/UncJ m 0.5880233333 0.4238908835 1.4241042247 -0.2480575581
CC018/UncJ f 1.5493966667 0.4238908835 2.3854775581 0.7133157753
CC018/UncJ m 0.67206 0.5191581856 1.6960457838 -0.3519257838
CC019/TauUncJ f 1.104755 0.3671002736 1.8288222916 0.3806877084
CC019/TauUncJ m 0.85113 0.3671002736 1.5751972916 0.1270627084
CC025/GeniUncJ f 1.8004266667 0.4238908835 2.6365075581 0.9643457753
CC025/GeniUncJ m 1.2951966667 0.4238908835 2.1312775581 0.4591157753
CC027/GeniUncJ f 1.015905 0.5191581856 2.0398907838 -0.0080807838
CC027/GeniUncJ m 0.7724175 0.3671002736 1.4964847916 0.0483502084
CC028/GeniUncJ f 0.9706866667 0.4238908835 1.8067675581 0.1346057753
CC028/GeniUncJ m 0.6055233333 0.4238908835 1.4416042247 -0.2305575581
CC030/GeniUncJ f 0.878755 0.5191581856 1.9027407838 -0.1452307838
CC030/GeniUncJ m 0.712445 0.5191581856 1.7364307838 -0.3115407838
CC033/GeniUncJ f 1.263825 0.5191581856 2.2878107838 0.2398392162
CC033/GeniUncJ m 1.60581 0.5191581856 2.6297957838 0.5818242162
CC036/UncJ f 2.1749 0.4238908835 3.0109808914 1.3388191086
CC036/UncJ m 2.7515333333 0.4238908835 3.5876142247 1.9154524419
CC037/TauUncJ f 0.987 0.5191581856 2.0109857838 -0.0369857838
CC037/TauUncJ m 0.8211066667 0.4238908835 1.6571875581 -0.0149742247
CC040/TauUncJ f 0.60853 0.4238908835 1.4446108914 -0.2275508914
CC040/TauUncJ m 0.5192066667 0.4238908835 1.3552875581 -0.3168742247
CC041/TauUncJ f 2.0736333333 0.4238908835 2.9097142247 1.2375524419
CC041/TauUncJ m 1.2625 0.5191581856 2.2864857838 0.2385142162
CC043/GeniUncJ f 1.06075 0.5191581856 2.0847357838 0.0367642162
CC043/GeniUncJ m 1.03565 0.5191581856 2.0596357838 0.0116642162
CC057/UncJ f 1.9584 0.5191581856 2.9823857838 0.9344142162
CC057/UncJ m 2.3777 0.5191581856 3.4016857838 1.3537142162
CC059/TauUncJ f 1.40646 0.3671002736 2.1305272916 0.6823927084
CC059/TauUncJ m 1.447998 0.3283444665 2.0956234737 0.8003725263
CC061/GeniUncJ f 1.5761333333 0.4238908835 2.4122142247 0.7400524419
CC061/GeniUncJ m 2.35036 0.5191581856 3.3743457838 1.3263742162
CC078/TauUncJ f 0.54369 0.4238908835 1.3797708914 -0.2923908914
CC078/TauUncJ m 0.3964966667 0.4238908835 1.2325775581 -0.4395842247
CC084/TauJ f 0.743565 0.5191581856 1.7675507838 -0.2804207838
CC084/TauJ m 1.40925 0.5191581856 2.4332357838 0.3852642162
NOD/ShiLtJ f 1.6595325 0.2595790928 2.1715253919 1.1475396081
NOD/ShiLtJ m 0.9839327273 0.2213697942 1.4205617326 0.547303722
NZO/HlLtJ f 1.5163 0.4238908835 2.3523808914 0.6802191086
NZO/HlLtJ m 1.44396 0.5191581856 2.4679457838 0.4199742162
PWK/PhJ f 0.6994466667 0.2447335157 1.1821581944 0.216735139
PWK/PhJ m 0.66832 0.2595790928 1.1803128919 0.1563271081
WSB/EiJ f 1.19974625 0.2595790928 1.7117391419 0.6877533581
WSB/EiJ m 0.714885 0.2997361182 1.3060834679 0.1236865321


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.826585 0.2803774652 1.3796005286 0.2735694714
A/J both 2.0283441667 0.2222902547 2.466788685 1.5898996483
C57BL/6J both 1.190077987 0.1479089153 1.4818130125 0.8983429615
CAST/EiJ both 0.6423095 0.1741309491 0.9857647731 0.2988542269
CC001/UncJ both 0.9148591667 0.3351151678 1.5758391479 0.2538791854
CC002/UncJ both 1.21123625 0.2595790928 1.7232291419 0.6992433581
CC003/UncJ both 1.21139 0.3351151678 1.8723699812 0.5504100188
CC005/TauUncJ both 0.7378216667 0.3351151678 1.3988016479 0.0768416854
CC006/TauUncJ both 1.6500275 0.3671002736 2.3740947916 0.9259602084
CC009/UncJ both 0.31105 0.3671002736 1.0351172916 -0.4130172916
CC011/UncJ both 1.6487333333 0.2997361182 2.2399318013 1.0575348654
CC013/GeniUncJ both 3.222375 0.3671002736 3.9464422916 2.4983077084
CC016/GeniUncJ both 0.5744783333 0.2803774652 1.127493862 0.0214628047
CC017/UncJ both 0.5637441667 0.3351151678 1.2247241479 -0.0972358146
CC018/UncJ both 1.1107283333 0.3351151678 1.7717083146 0.4497483521
CC019/TauUncJ both 0.9779425 0.2595790928 1.4899353919 0.4659496081
CC025/GeniUncJ both 1.5478116667 0.2997361182 2.1390101346 0.9566131987
CC027/GeniUncJ both 0.89416125 0.3179181627 1.5212219185 0.2671005815
CC028/GeniUncJ both 0.788105 0.2997361182 1.3793034679 0.1969065321
CC030/GeniUncJ both 0.7956 0.3671002736 1.5196672916 0.0715327084
CC033/GeniUncJ both 1.4348175 0.3671002736 2.1588847916 0.7107502084
CC036/UncJ both 2.4632166667 0.2997361182 3.0544151346 1.8720181987
CC037/TauUncJ both 0.9040533333 0.3351151678 1.5650333146 0.2430733521
CC040/TauUncJ both 0.5638683333 0.2997361182 1.1550668013 -0.0273301346
CC041/TauUncJ both 1.6680666667 0.3351151678 2.3290466479 1.0070866854
CC043/GeniUncJ both 1.0482 0.3671002736 1.7722672916 0.3241327084
CC057/UncJ both 2.16805 0.3671002736 2.8921172916 1.4439827084
CC059/TauUncJ both 1.427229 0.2462583499 1.9129481053 0.9415098947
CC061/GeniUncJ both 1.9632466667 0.3351151678 2.6242266479 1.3022666854
CC078/TauUncJ both 0.4700933333 0.2997361182 1.0612918013 -0.1211051346
CC084/TauJ both 1.0764075 0.3671002736 1.8004747916 0.3523402084
NOD/ShiLtJ both 1.3217326136 0.1705768824 1.6581778579 0.9852873693
NZO/HlLtJ both 1.48013 0.3351151678 2.1411099812 0.8191500188
PWK/PhJ both 0.6838833333 0.1783786697 1.0357167955 0.3320498712
WSB/EiJ both 0.957315625 0.1982568069 1.3483566554 0.5662745946




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA