Project measure / variable:   CSNA03   antici_incorrect_cc_rev_JAX

ID, description, units MPD:110516   antici_incorrect_cc_rev_JAX   mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  reversal  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means1.2602   n 1.3762   n
Median of the strain means1.1048   n 0.99664   n
SD of the strain means± 0.70632 ± 1.7978
Coefficient of variation (CV)0.5605 1.3063
Min–max range of strain means0.32353   –   3.8661   n 0.18421   –   12.697   n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.2386 1.2386 2.2977 0.1312
strain 34 74.8962 2.2028 4.0865 < 0.0001
sex:strain 34 10.5378 0.3099 0.575 0.9715
Residuals 192 103.4977 0.5391


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.65653 0.44716   3 0.25817 0.6811 0.28125, 1.1513 -0.85
129S1/SvImJ m 0.99664 0.64685   4 0.32342 0.649 0.47619, 1.9419 -0.21
A/J f 2.4085 1.4479   6 0.59111 0.6012 0.66667, 4.7075 1.63
A/J m 1.6482 1.189   5 0.53175 0.7214 0.4321, 3.2683 0.15
C57BL/6J f 1.2143 0.47591   14 0.12719 0.3919 0.39216, 2.1959 -0.07
C57BL/6J m 1.1659 0.64052   11 0.19312 0.5494 0.30387, 2.4034 -0.12
CAST/EiJ f 0.55994 0.71955   10 0.22754 1.285 0.1134, 2.4942 -0.99
CAST/EiJ m 0.72468 0.4893   8 0.17299 0.6752 0.16, 1.5068 -0.36
CC001/UncJ f 1.3744 1.3196   3 0.76189 0.9602 0.59444, 2.898 0.16
CC001/UncJ m 0.45534 0.19612   2   0.13868 0.4307 0.31667, 0.59402 -0.51
CC002/UncJ f 1.1398 0.68732   4 0.34366 0.603 0.376, 1.7755 -0.17
CC002/UncJ m 1.2826 0.92554   4 0.46277 0.7216 0.36364, 2.5326 -0.05
CC003/UncJ f 1.1802 0.92497   2   0.65405 0.7838 0.5261, 1.8342 -0.11
CC003/UncJ m 1.2426 0.87337   3 0.50424 0.7028 0.33099, 2.0719 -0.07
CC004/TauUncJ f 1.5956 0.0   1   0.0 0.0 1.5956, 1.5956 0.47
CC004/TauUncJ m 0.66678 0.2692   2   0.19036 0.4037 0.47643, 0.85714 -0.39
CC005/TauUncJ f 0.98846 0.49689   3 0.28688 0.5027 0.43269, 1.3898 -0.38
CC005/TauUncJ m 0.48718 0.56207   2   0.39744 1.1537 0.08974, 0.88462 -0.49
CC006/TauUncJ f 1.2824 1.0149   2   0.71765 0.7914 0.56471, 2.0 0.03
CC006/TauUncJ m 2.0177 1.3139   2   0.9291 0.6512 1.0886, 2.9468 0.36
CC007/UncJ f 1.009 0.0   1   0.0 0.0 1.009, 1.009 -0.36
CC008/GeniUncJ f 0.32353 0.0   1   0.0 0.0 0.32353, 0.32353 -1.33
CC008/GeniUncJ m 1.3659 0.0   1   0.0 0.0 1.3659, 1.3659 -0.01
CC009/UncJ f 0.38958 0.05825   2   0.04119 0.1495 0.34839, 0.43077 -1.23
CC009/UncJ m 0.23252 0.06279   2   0.0444 0.27 0.18812, 0.27692 -0.64
CC011/UncJ f 1.5404 0.48854   3 0.28206 0.3171 1.1014, 2.0667 0.4
CC011/UncJ m 1.7571 1.6007   3 0.92416 0.911 0.71345, 3.6 0.21
CC012/GeniUncJ f 0.70823 0.08303   3 0.04794 0.1172 0.63551, 0.7987 -0.78
CC012/GeniUncJ m 2.7045 0.0   1   0.0 0.0 2.7045, 2.7045 0.74
CC013/GeniUncJ f 3.0745 1.1244   2   0.7951 0.3657 2.2794, 3.8696 2.57
CC013/GeniUncJ m 3.3702 1.118   2   0.79055 0.3317 2.5797, 4.1608 1.11
CC015/UncJ f 1.5714 0.0   1   0.0 0.0 1.5714, 1.5714 0.44
CC015/UncJ m 0.18421 0.0   1   0.0 0.0 0.18421, 0.18421 -0.66
CC016/GeniUncJ f 0.64778 0.60968   3 0.352 0.9412 0.19492, 1.341 -0.87
CC016/GeniUncJ m 0.50118 0.30464   4 0.15232 0.6078 0.21053, 0.87826 -0.49
CC017/UncJ f 0.53946 0.184   2   0.1301 0.3411 0.40936, 0.66957 -1.02
CC017/UncJ m 0.58802 0.58551   3 0.33804 0.9957 0.15152, 1.2534 -0.44
CC018/UncJ f 1.5494 0.83392   3 0.48146 0.5382 0.92829, 2.4972 0.41
CC018/UncJ m 0.67206 0.01123   2   0.00794 0.0167 0.66412, 0.68 -0.39
CC019/TauUncJ f 1.1048 0.55319   4 0.27659 0.5007 0.29032, 1.5259 -0.22
CC019/TauUncJ m 0.85113 0.24168   4 0.12084 0.284 0.61875, 1.0723 -0.29
CC023/GeniUncJ f 1.2791 0.50524   2   0.35726 0.395 0.92188, 1.6364 0.03
CC023/GeniUncJ m 1.4521 0.0   1   0.0 0.0 1.4521, 1.4521 0.04
CC025/GeniUncJ f 1.8004 1.1613   3 0.67047 0.645 0.94118, 3.1216 0.76
CC025/GeniUncJ m 1.2952 0.95774   3 0.55295 0.7395 0.35119, 2.2661 -0.05
CC026/GeniUncJ f 0.92453 0.0   1   0.0 0.0 0.92453, 0.92453 -0.48
CC026/GeniUncJ m 1.7417 1.2964   2   0.9167 0.7443 0.825, 2.6584 0.2
CC027/GeniUncJ f 1.0159 0.07424   2   0.0525 0.0731 0.96341, 1.0684 -0.35
CC027/GeniUncJ m 0.77242 0.39623   4 0.19812 0.513 0.36585, 1.2635 -0.34
CC028/GeniUncJ f 0.97069 0.37632   3 0.21727 0.3877 0.53886, 1.2286 -0.41
CC028/GeniUncJ m 0.60552 0.34001   3 0.19631 0.5615 0.28049, 0.95876 -0.43
CC029/UncJ f 0.47917 0.0   1   0.0 0.0 0.47917, 0.47917 -1.11
CC029/UncJ m 0.5 0.0   1   0.0 0.0 0.5, 0.5 -0.49
CC030/GeniUncJ f 0.87876 0.43833   2   0.30994 0.4988 0.56881, 1.1887 -0.54
CC030/GeniUncJ m 0.71244 0.12   2   0.08486 0.1684 0.62759, 0.7973 -0.37
CC032/GeniUncJ f 0.64298 0.09928   2   0.0702 0.1544 0.57277, 0.71318 -0.87
CC033/GeniUncJ f 1.2638 1.084   2   0.76647 0.8577 0.49735, 2.0303 0.01
CC033/GeniUncJ m 1.6058 0.88684   2   0.62709 0.5523 0.97872, 2.2329 0.13
CC035/UncJ m 0.29889 0.0   1   0.0 0.0 0.29889, 0.29889 -0.6
CC036/UncJ f 2.1749 0.9757   3 0.56332 0.4486 1.1509, 3.0938 1.29
CC036/UncJ m 2.7515 1.3468   3 0.77756 0.4895 1.2299, 3.7903 0.76
CC037/TauUncJ f 0.987 0.05233   2   0.037 0.053 0.95, 1.024 -0.39
CC037/TauUncJ m 0.82111 0.66448   3 0.38363 0.8092 0.25, 1.5504 -0.31
CC040/TauUncJ f 0.60853 0.457   3 0.26385 0.751 0.1, 0.98485 -0.92
CC040/TauUncJ m 0.51921 0.32531   3 0.18782 0.6266 0.18927, 0.83969 -0.48
CC041/TauUncJ f 2.0736 1.3888   3 0.80182 0.6697 0.7, 3.4771 1.15
CC041/TauUncJ m 1.2625 0.51265   2   0.3625 0.4061 0.9, 1.625 -0.06
CC043/GeniUncJ f 1.0608 0.64651   2   0.45715 0.6095 0.6036, 1.5179 -0.28
CC043/GeniUncJ m 1.0356 0.58075   2   0.41065 0.5608 0.625, 1.4463 -0.19
CC044/UncJ f 0.39181 0.0   1   0.0 0.0 0.39181, 0.39181 -1.23
CC051/TauUncJ f 2.1818 0.0   1   0.0 0.0 2.1818, 2.1818 1.3
CC051/TauUncJ m 1.4726 0.0   1   0.0 0.0 1.4726, 1.4726 0.05
CC057/UncJ f 1.9584 0.14863   2   0.1051 0.0759 1.8533, 2.0635 0.99
CC057/UncJ m 2.3777 0.77485   2   0.5479 0.3259 1.8298, 2.9256 0.56
CC059/TauUncJ f 1.4065 0.63284   4 0.31642 0.45 0.68304, 2.2097 0.21
CC059/TauUncJ m 1.448 0.48555   5 0.21715 0.3353 0.98089, 2.1791 0.04
CC060/UncJ f 1.0678 0.0   1   0.0 0.0 1.0678, 1.0678 -0.27
CC060/UncJ m 0.70213 0.0   1   0.0 0.0 0.70213, 0.70213 -0.37
CC061/GeniUncJ f 1.5761 0.70583   3 0.40751 0.4478 1.1173, 2.3889 0.45
CC061/GeniUncJ m 2.3504 2.0254   2   1.4321 0.8617 0.91822, 3.7825 0.54
CC074/UncJ f 3.8661 0.0   1   0.0 0.0 3.8661, 3.8661 3.69
CC074/UncJ m 12.697 0.0   1   0.0 0.0 12.697, 12.697 6.3
CC075/UncJ f 0.83319 0.90794   2   0.64201 1.0897 0.19118, 1.4752 -0.6
CC075/UncJ m 0.37097 0.0   1   0.0 0.0 0.37097, 0.37097 -0.56
CC078/TauUncJ f 0.54369 0.29631   3 0.17108 0.545 0.2377, 0.82927 -1.01
CC078/TauUncJ m 0.3965 0.19676   3 0.1136 0.4962 0.26733, 0.62295 -0.54
CC079/TauUncJ f 2.584 0.0   1   0.0 0.0 2.584, 2.584 1.87
CC079/TauUncJ m 1.6279 0.95223   2   0.67333 0.5849 0.95455, 2.3012 0.14
CC080/TauUncJ f 1.0254 0.86408   2   0.61099 0.8427 0.41441, 1.6364 -0.33
CC080/TauUncJ m 0.48404 0.0   1   0.0 0.0 0.48404, 0.48404 -0.5
CC084/TauJ f 0.74357 0.596   2   0.42144 0.8015 0.32213, 1.165 -0.73
CC084/TauJ m 1.4093 0.01676   2   0.01185 0.0119 1.3974, 1.4211 0.02
NOD/ShiLtJ f 1.6595 0.90221   8 0.31898 0.5437 0.35849, 3.3 0.57
NOD/ShiLtJ m 0.98393 0.59974   11 0.18083 0.6095 0.2459, 1.9753 -0.22
NZO/HlLtJ f 1.5163 0.67815   3 0.39153 0.4472 0.7619, 2.0753 0.36
NZO/HlLtJ m 1.444 0.92467   2   0.65384 0.6404 0.79012, 2.0978 0.04
PWK/PhJ f 0.69945 0.53897   9 0.17966 0.7706 0.10092, 1.7101 -0.79
PWK/PhJ m 0.66832 0.5148   8 0.18201 0.7703 0.21212, 1.6471 -0.39
WSB/EiJ f 1.1997 0.55143   8 0.19496 0.4596 0.48649, 2.0638 -0.09
WSB/EiJ m 0.71489 0.45907   6 0.18741 0.6422 0.13559, 1.5092 -0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.65653 0.4238908835 1.4926108914 -0.1795508914
129S1/SvImJ m 0.99664 0.3671002736 1.7207072916 0.2725727084
A/J f 2.4085283333 0.2997361182 2.9997268013 1.8173298654
A/J m 1.64816 0.3283444665 2.2957854737 1.0005345263
C57BL/6J f 1.2142914286 0.19622335 1.6013216757 0.8272611814
C57BL/6J m 1.1658645455 0.2213697942 1.6024935507 0.7292355402
CAST/EiJ f 0.559944 0.2321745988 1.0178843641 0.1020036359
CAST/EiJ m 0.724675 0.2595790928 1.2366678919 0.2126821081
CC001/UncJ f 1.3743733333 0.4238908835 2.2104542247 0.5382924419
CC001/UncJ m 0.455345 0.5191581856 1.4793307838 -0.5686407838
CC002/UncJ f 1.1398325 0.3671002736 1.8638997916 0.4157652084
CC002/UncJ m 1.28264 0.3671002736 2.0067072916 0.5585727084
CC003/UncJ f 1.18015 0.5191581856 2.2041357838 0.1561642162
CC003/UncJ m 1.24263 0.4238908835 2.0787108914 0.4065491086
CC005/TauUncJ f 0.9884633333 0.4238908835 1.8245442247 0.1523824419
CC005/TauUncJ m 0.48718 0.5191581856 1.5111657838 -0.5368057838
CC006/TauUncJ f 1.282355 0.5191581856 2.3063407838 0.2583692162
CC006/TauUncJ m 2.0177 0.5191581856 3.0416857838 0.9937142162
CC009/UncJ f 0.38958 0.5191581856 1.4135657838 -0.6344057838
CC009/UncJ m 0.23252 0.5191581856 1.2565057838 -0.7914657838
CC011/UncJ f 1.5404 0.4238908835 2.3764808914 0.7043191086
CC011/UncJ m 1.7570666667 0.4238908835 2.5931475581 0.9209857753
CC013/GeniUncJ f 3.0745 0.5191581856 4.0984857838 2.0505142162
CC013/GeniUncJ m 3.37025 0.5191581856 4.3942357838 2.3462642162
CC016/GeniUncJ f 0.6477766667 0.4238908835 1.4838575581 -0.1883042247
CC016/GeniUncJ m 0.50118 0.3671002736 1.2252472916 -0.2228872916
CC017/UncJ f 0.539465 0.5191581856 1.5634507838 -0.4845207838
CC017/UncJ m 0.5880233333 0.4238908835 1.4241042247 -0.2480575581
CC018/UncJ f 1.5493966667 0.4238908835 2.3854775581 0.7133157753
CC018/UncJ m 0.67206 0.5191581856 1.6960457838 -0.3519257838
CC019/TauUncJ f 1.104755 0.3671002736 1.8288222916 0.3806877084
CC019/TauUncJ m 0.85113 0.3671002736 1.5751972916 0.1270627084
CC025/GeniUncJ f 1.8004266667 0.4238908835 2.6365075581 0.9643457753
CC025/GeniUncJ m 1.2951966667 0.4238908835 2.1312775581 0.4591157753
CC027/GeniUncJ f 1.015905 0.5191581856 2.0398907838 -0.0080807838
CC027/GeniUncJ m 0.7724175 0.3671002736 1.4964847916 0.0483502084
CC028/GeniUncJ f 0.9706866667 0.4238908835 1.8067675581 0.1346057753
CC028/GeniUncJ m 0.6055233333 0.4238908835 1.4416042247 -0.2305575581
CC030/GeniUncJ f 0.878755 0.5191581856 1.9027407838 -0.1452307838
CC030/GeniUncJ m 0.712445 0.5191581856 1.7364307838 -0.3115407838
CC033/GeniUncJ f 1.263825 0.5191581856 2.2878107838 0.2398392162
CC033/GeniUncJ m 1.60581 0.5191581856 2.6297957838 0.5818242162
CC036/UncJ f 2.1749 0.4238908835 3.0109808914 1.3388191086
CC036/UncJ m 2.7515333333 0.4238908835 3.5876142247 1.9154524419
CC037/TauUncJ f 0.987 0.5191581856 2.0109857838 -0.0369857838
CC037/TauUncJ m 0.8211066667 0.4238908835 1.6571875581 -0.0149742247
CC040/TauUncJ f 0.60853 0.4238908835 1.4446108914 -0.2275508914
CC040/TauUncJ m 0.5192066667 0.4238908835 1.3552875581 -0.3168742247
CC041/TauUncJ f 2.0736333333 0.4238908835 2.9097142247 1.2375524419
CC041/TauUncJ m 1.2625 0.5191581856 2.2864857838 0.2385142162
CC043/GeniUncJ f 1.06075 0.5191581856 2.0847357838 0.0367642162
CC043/GeniUncJ m 1.03565 0.5191581856 2.0596357838 0.0116642162
CC057/UncJ f 1.9584 0.5191581856 2.9823857838 0.9344142162
CC057/UncJ m 2.3777 0.5191581856 3.4016857838 1.3537142162
CC059/TauUncJ f 1.40646 0.3671002736 2.1305272916 0.6823927084
CC059/TauUncJ m 1.447998 0.3283444665 2.0956234737 0.8003725263
CC061/GeniUncJ f 1.5761333333 0.4238908835 2.4122142247 0.7400524419
CC061/GeniUncJ m 2.35036 0.5191581856 3.3743457838 1.3263742162
CC078/TauUncJ f 0.54369 0.4238908835 1.3797708914 -0.2923908914
CC078/TauUncJ m 0.3964966667 0.4238908835 1.2325775581 -0.4395842247
CC084/TauJ f 0.743565 0.5191581856 1.7675507838 -0.2804207838
CC084/TauJ m 1.40925 0.5191581856 2.4332357838 0.3852642162
NOD/ShiLtJ f 1.6595325 0.2595790928 2.1715253919 1.1475396081
NOD/ShiLtJ m 0.9839327273 0.2213697942 1.4205617326 0.547303722
NZO/HlLtJ f 1.5163 0.4238908835 2.3523808914 0.6802191086
NZO/HlLtJ m 1.44396 0.5191581856 2.4679457838 0.4199742162
PWK/PhJ f 0.6994466667 0.2447335157 1.1821581944 0.216735139
PWK/PhJ m 0.66832 0.2595790928 1.1803128919 0.1563271081
WSB/EiJ f 1.19974625 0.2595790928 1.7117391419 0.6877533581
WSB/EiJ m 0.714885 0.2997361182 1.3060834679 0.1236865321


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.826585 0.2803774652 1.3796005286 0.2735694714
A/J both 2.0283441667 0.2222902547 2.466788685 1.5898996483
C57BL/6J both 1.190077987 0.1479089153 1.4818130125 0.8983429615
CAST/EiJ both 0.6423095 0.1741309491 0.9857647731 0.2988542269
CC001/UncJ both 0.9148591667 0.3351151678 1.5758391479 0.2538791854
CC002/UncJ both 1.21123625 0.2595790928 1.7232291419 0.6992433581
CC003/UncJ both 1.21139 0.3351151678 1.8723699812 0.5504100188
CC005/TauUncJ both 0.7378216667 0.3351151678 1.3988016479 0.0768416854
CC006/TauUncJ both 1.6500275 0.3671002736 2.3740947916 0.9259602084
CC009/UncJ both 0.31105 0.3671002736 1.0351172916 -0.4130172916
CC011/UncJ both 1.6487333333 0.2997361182 2.2399318013 1.0575348654
CC013/GeniUncJ both 3.222375 0.3671002736 3.9464422916 2.4983077084
CC016/GeniUncJ both 0.5744783333 0.2803774652 1.127493862 0.0214628047
CC017/UncJ both 0.5637441667 0.3351151678 1.2247241479 -0.0972358146
CC018/UncJ both 1.1107283333 0.3351151678 1.7717083146 0.4497483521
CC019/TauUncJ both 0.9779425 0.2595790928 1.4899353919 0.4659496081
CC025/GeniUncJ both 1.5478116667 0.2997361182 2.1390101346 0.9566131987
CC027/GeniUncJ both 0.89416125 0.3179181627 1.5212219185 0.2671005815
CC028/GeniUncJ both 0.788105 0.2997361182 1.3793034679 0.1969065321
CC030/GeniUncJ both 0.7956 0.3671002736 1.5196672916 0.0715327084
CC033/GeniUncJ both 1.4348175 0.3671002736 2.1588847916 0.7107502084
CC036/UncJ both 2.4632166667 0.2997361182 3.0544151346 1.8720181987
CC037/TauUncJ both 0.9040533333 0.3351151678 1.5650333146 0.2430733521
CC040/TauUncJ both 0.5638683333 0.2997361182 1.1550668013 -0.0273301346
CC041/TauUncJ both 1.6680666667 0.3351151678 2.3290466479 1.0070866854
CC043/GeniUncJ both 1.0482 0.3671002736 1.7722672916 0.3241327084
CC057/UncJ both 2.16805 0.3671002736 2.8921172916 1.4439827084
CC059/TauUncJ both 1.427229 0.2462583499 1.9129481053 0.9415098947
CC061/GeniUncJ both 1.9632466667 0.3351151678 2.6242266479 1.3022666854
CC078/TauUncJ both 0.4700933333 0.2997361182 1.0612918013 -0.1211051346
CC084/TauJ both 1.0764075 0.3671002736 1.8004747916 0.3523402084
NOD/ShiLtJ both 1.3217326136 0.1705768824 1.6581778579 0.9852873693
NZO/HlLtJ both 1.48013 0.3351151678 2.1411099812 0.8191500188
PWK/PhJ both 0.6838833333 0.1783786697 1.0357167955 0.3320498712
WSB/EiJ both 0.957315625 0.1982568069 1.3483566554 0.5662745946




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA