Project measure / variable:   CSNA03   antici_correct_cc_acq_JAX

ID, description, units MPD:110513   antici_correct_cc_acq_JAX   mean number of anticipatory nose pokes made in correct flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  acquisition  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - mean number of anticipatory nose pokes made in correct flanking hole without prior successful nose poke in central hole (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains48 strains
Mean of the strain means0.92268   n 1.0494   n
Median of the strain means0.728   n 0.58974   n
SD of the strain means± 0.93971 ± 1.9951
Coefficient of variation (CV)1.0185 1.9012
Min–max range of strain means0.04255   –   5.7191   n 0.04   –   13.842   n
Mean sample size per strain2.9   mice 2.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 28.8329 28.8329 0.5218 0.471
strain 34 669.8988 19.7029 0.3565 0.9997
sex:strain 34 714.4178 21.0123 0.3802 0.9993
Residuals 184 10168.0903 55.2614


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.2186 1.327   3 0.76616 1.089 0.06061, 2.6667 0.31
129S1/SvImJ m 0.83518 0.7107   4 0.35535 0.851 0.05, 1.6273 -0.11
A/J f 2.983 2.7721   6 1.1317 0.9293 0.35, 8.1867 2.19
A/J m 1.6766 1.1709   5 0.52362 0.6984 0.39316, 3.2105 0.31
C57BL/6J f 0.79478 0.45822   13 0.12709 0.5765 0.07407, 1.75 -0.14
C57BL/6J m 0.30735 0.2252   11 0.0679 0.7327 0.02778, 0.79518 -0.37
CAST/EiJ f 0.33096 0.31604   10 0.09994 0.9549 0.0202, 1.0 -0.63
CAST/EiJ m 0.72474 0.57492   7 0.2173 0.7933 0.17073, 1.6364 -0.16
CC001/UncJ f 0.728 0.73888   3 0.42659 1.0149 0.25862, 1.5797 -0.21
CC001/UncJ m 0.39245 0.12685   2   0.08969 0.3232 0.30275, 0.48214 -0.33
CC002/UncJ f 0.16128 0.03913   3 0.02259 0.2426 0.12903, 0.20482 -0.81
CC002/UncJ m 0.22309 0.2028   4 0.1014 0.9091 0.07143, 0.51456 -0.41
CC003/UncJ f 0.45058 0.14061   2   0.09942 0.3121 0.35115, 0.55 -0.5
CC003/UncJ m 0.46054 0.4677   3 0.27003 1.0155 0.16901, 1.0 -0.3
CC004/TauUncJ f 0.68939 0.0   1   0.0 0.0 0.68939, 0.68939 -0.25
CC004/TauUncJ m 1.1453 0.70039   2   0.49525 0.6116 0.65, 1.6405 0.05
CC005/TauUncJ f 0.91508 0.42782   3 0.247 0.4675 0.47826, 1.3333 -0.01
CC005/TauUncJ m 0.32693 0.24477   2   0.17307 0.7487 0.15385, 0.5 -0.36
CC006/TauUncJ f 0.26382 0.05982   2   0.0423 0.2268 0.22152, 0.30612 -0.7
CC006/TauUncJ m 0.20172 0.21457   2   0.15172 1.0637 0.05, 0.35345 -0.42
CC007/UncJ f 0.5 0.0   1   0.0 0.0 0.5, 0.5 -0.45
CC008/GeniUncJ f 0.04255 0.0   1   0.0 0.0 0.04255, 0.04255 -0.94
CC008/GeniUncJ m 0.37778 0.0   1   0.0 0.0 0.37778, 0.37778 -0.34
CC009/UncJ f 0.6427 0.62607   2   0.4427 0.9741 0.2, 1.0854 -0.3
CC009/UncJ m 0.10556 0.00785596   2   0.005555 0.0744 0.1, 0.11111 -0.47
CC011/UncJ f 1.8189 1.0336   3 0.59674 0.5682 0.82857, 2.8909 0.95
CC011/UncJ m 1.0288 0.4666   3 0.26939 0.4535 0.65, 1.55 -0.01
CC012/GeniUncJ f 0.2077 0.20871   3 0.1205 1.0049 0.05714, 0.44595 -0.76
CC012/GeniUncJ m 0.77895 0.0   1   0.0 0.0 0.77895, 0.77895 -0.14
CC013/GeniUncJ f 2.1185 1.3773   2   0.9739 0.6501 1.1446, 3.0924 1.27
CC013/GeniUncJ m 2.3897 1.1494   2   0.81275 0.481 1.5769, 3.2024 0.67
CC015/UncJ f 5.7191 0.0   1   0.0 0.0 5.7191, 5.7191 5.1
CC015/UncJ m 0.08791 0.0   1   0.0 0.0 0.08791, 0.08791 -0.48
CC016/GeniUncJ f 0.17793 0.02698   3 0.01558 0.1516 0.16, 0.20896 -0.79
CC016/GeniUncJ m 0.18005 0.15444   4 0.07722 0.8578 0.06452, 0.40566 -0.44
CC017/UncJ f 0.17355 0.06098   2   0.04312 0.3514 0.13043, 0.21667 -0.8
CC017/UncJ m 0.14881 0.12296   3 0.07099 0.8263 0.06173, 0.28947 -0.45
CC018/UncJ f 1.277 0.97431   3 0.56252 0.763 0.5082, 2.3727 0.38
CC018/UncJ m 0.25 0.21213   2   0.15 0.8485 0.1, 0.4 -0.4
CC019/TauUncJ f 1.0884 0.39574   3 0.22848 0.3636 0.7619, 1.5285 0.18
CC019/TauUncJ m 0.24775 0.15042   4 0.07521 0.6071 0.125, 0.4625 -0.4
CC023/GeniUncJ f 1.324 1.5189   2   1.074 1.1472 0.25, 2.3981 0.43
CC023/GeniUncJ m 1.5325 0.0   1   0.0 0.0 1.5325, 1.5325 0.24
CC025/GeniUncJ f 1.5241 0.93996   3 0.54269 0.6167 0.97101, 2.6094 0.64
CC025/GeniUncJ m 0.59808 0.41326   3 0.23859 0.691 0.2, 1.025 -0.23
CC026/GeniUncJ f 0.8125 0.0   1   0.0 0.0 0.8125, 0.8125 -0.12
CC026/GeniUncJ m 1.1655 1.3339   2   0.94324 1.1446 0.22222, 2.1087 0.06
CC027/GeniUncJ f 0.41667 0.11785   2   0.08334 0.2828 0.33333, 0.5 -0.54
CC027/GeniUncJ m 0.60106 0.51836   4 0.25918 0.8624 0.20312, 1.3626 -0.22
CC028/GeniUncJ f 0.70629 0.33045   3 0.19079 0.4679 0.375, 1.0359 -0.23
CC028/GeniUncJ m 0.40184 0.37259   3 0.21511 0.9272 0.18428, 0.83206 -0.32
CC029/UncJ f 0.66071 0.0   1   0.0 0.0 0.66071, 0.66071 -0.28
CC029/UncJ m 0.45192 0.0   1   0.0 0.0 0.45192, 0.45192 -0.3
CC030/GeniUncJ f 0.14242 0.10436   2   0.07379 0.7327 0.06863, 0.21622 -0.83
CC030/GeniUncJ m 0.35257 0.24904   2   0.17609 0.7064 0.17647, 0.52866 -0.35
CC032/GeniUncJ f 0.38586 0.40427   2   0.28586 1.0477 0.1, 0.67172 -0.57
CC033/GeniUncJ f 0.7814 0.56767   2   0.4014 0.7265 0.38, 1.1828 -0.15
CC033/GeniUncJ m 0.75475 0.58655   2   0.41475 0.7771 0.34, 1.1695 -0.15
CC035/UncJ m 0.41935 0.0   1   0.0 0.0 0.41935, 0.41935 -0.32
CC036/UncJ f 1.1608 0.55896   3 0.32271 0.4815 0.51807, 1.5333 0.25
CC036/UncJ m 2.0024 2.0829   3 1.2026 1.0402 0.15873, 4.2619 0.48
CC037/TauUncJ f 0.60072 0.71358   2   0.50457 1.1879 0.09615, 1.1053 -0.34
CC037/TauUncJ m 0.37531 0.25406   3 0.14668 0.6769 0.2, 0.66667 -0.34
CC040/TauUncJ f 0.14715 0.04748   3 0.02741 0.3227 0.10811, 0.2 -0.83
CC040/TauUncJ m 0.26576 0.10086   2   0.07132 0.3795 0.19444, 0.33708 -0.39
CC041/TauUncJ f 0.86863 0.69295   3 0.40007 0.7977 0.1, 1.4455 -0.06
CC041/TauUncJ m 1.9058 1.4655   2   1.0363 0.769 0.86957, 2.9421 0.43
CC043/GeniUncJ f 0.42458 0.51603   2   0.36489 1.2154 0.0597, 0.78947 -0.53
CC043/GeniUncJ m 0.8662 0.88558   2   0.6262 1.0224 0.24, 1.4924 -0.09
CC044/UncJ f 0.05 0.0   1   0.0 0.0 0.05, 0.05 -0.93
CC051/TauUncJ f 1.24 0.0   1   0.0 0.0 1.24, 1.24 0.34
CC051/TauUncJ m 1.4468 0.0   1   0.0 0.0 1.4468, 1.4468 0.2
CC057/UncJ f 1.1084 0.08902   2   0.06295 0.0803 1.0455, 1.1714 0.2
CC057/UncJ m 2.9699 0.56887   2   0.40225 0.1915 2.5676, 3.3721 0.96
CC059/TauUncJ f 1.6055 1.5939   4 0.79693 0.9928 0.55224, 3.9797 0.73
CC059/TauUncJ m 1.631 1.2125   4 0.60627 0.7435 0.71038, 3.3793 0.29
CC060/UncJ f 0.275 0.0   1   0.0 0.0 0.275, 0.275 -0.69
CC060/UncJ m 0.5814 0.0   1   0.0 0.0 0.5814, 0.5814 -0.23
CC061/GeniUncJ f 1.0217 0.64303   3 0.37126 0.6294 0.34146, 1.6196 0.11
CC061/GeniUncJ m 1.1094 0.55243   2   0.39062 0.498 0.71875, 1.5 0.03
CC074/UncJ f 3.0426 0.0   1   0.0 0.0 3.0426, 3.0426 2.26
CC074/UncJ m 1.7959 0.0   1   0.0 0.0 1.7959, 1.7959 0.37
CC075/UncJ f 0.5625 0.0   1   0.0 0.0 0.5625, 0.5625 -0.38
CC075/UncJ m 0.04 0.0   1   0.0 0.0 0.04, 0.04 -0.51
CC078/TauUncJ f 0.31285 0.20262   3 0.11699 0.6477 0.10345, 0.50794 -0.65
CC078/TauUncJ m 0.50999 0.31718   2   0.22428 0.6219 0.28571, 0.73427 -0.27
CC079/TauUncJ f 0.97778 0.0   1   0.0 0.0 0.97778, 0.97778 0.06
CC079/TauUncJ m 0.60008 0.02033   2   0.01437 0.0339 0.58571, 0.61446 -0.23
CC080/TauUncJ f 0.77246 0.84647   2   0.59854 1.0958 0.17391, 1.371 -0.16
CC084/TauJ f 0.787 1.0423   2   0.737 1.3244 0.05, 1.524 -0.14
CC084/TauJ m 0.62244 0.57171   2   0.40426 0.9185 0.21818, 1.0267 -0.21
NOD/ShiLtJ f 1.006 0.87255   8 0.30849 0.8673 0.06977, 2.625 0.09
NOD/ShiLtJ m 0.76015 0.48722   11 0.1469 0.641 0.25, 1.7784 -0.14
NZO/HlLtJ f 0.59977 0.68067   3 0.39299 1.1349 0.1, 1.375 -0.34
NZO/HlLtJ m 0.49358 0.40875   2   0.28903 0.8281 0.20455, 0.78261 -0.28
PWK/PhJ f 0.39358 0.41058   8 0.14516 1.0432 0.07407, 1.3614 -0.56
PWK/PhJ m 13.842 37.886   8 13.395 2.737 0.04545, 107.6 6.41
WSB/EiJ f 1.0438 1.2716   8 0.44957 1.2182 0.10619, 4.0654 0.13
WSB/EiJ m 0.38537 0.27391   6 0.11182 0.7108 0.125, 0.74627 -0.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.2186266667 4.291905562 9.6863011541 -7.2490478208
129S1/SvImJ m 0.8351775 3.7168992474 8.1683987171 -6.4980437171
A/J f 2.983 3.0348355271 8.970550051 -3.004550051
A/J m 1.676562 3.3244957531 8.2355944542 -4.8824704542
C57BL/6J f 0.7947846154 2.0617647419 4.8625238635 -3.2729546327
C57BL/6J m 0.3073509091 2.2413745795 4.7294496876 -4.1147478694
CAST/EiJ f 0.330959 2.350773491 4.9688953264 -4.3069773264
CAST/EiJ m 0.7247442857 2.8097117305 6.2681384713 -4.8186498999
CC001/UncJ f 0.728 4.291905562 9.1956744875 -7.7396744875
CC001/UncJ m 0.392445 5.2564893256 10.7631859011 -9.9782959011
CC002/UncJ f 0.1612833333 4.291905562 8.6289578208 -8.3063911541
CC002/UncJ m 0.223085 3.7168992474 7.5563062171 -7.1101362171
CC003/UncJ f 0.450575 5.2564893256 10.8213159011 -9.9201659011
CC003/UncJ m 0.4605366667 4.291905562 8.9282111541 -8.0071378208
CC005/TauUncJ f 0.9150766667 4.291905562 9.3827511541 -7.5525978208
CC005/TauUncJ m 0.326925 5.2564893256 10.6976659011 -10.0438159011
CC006/TauUncJ f 0.26382 5.2564893256 10.6345609011 -10.1069209011
CC006/TauUncJ m 0.201725 5.2564893256 10.5724659011 -10.1690159011
CC009/UncJ f 0.6427 5.2564893256 11.0134409011 -9.7280409011
CC009/UncJ m 0.105555 5.2564893256 10.4762959011 -10.2651859011
CC011/UncJ f 1.8189233333 4.291905562 10.2865978208 -6.6487511541
CC011/UncJ m 1.0287866667 4.291905562 9.4964611541 -7.4388878208
CC013/GeniUncJ f 2.1185 5.2564893256 12.4892409011 -8.2522409011
CC013/GeniUncJ m 2.38965 5.2564893256 12.7603909011 -7.9810909011
CC016/GeniUncJ f 0.1779333333 4.291905562 8.6456078208 -8.2897411541
CC016/GeniUncJ m 0.180045 3.7168992474 7.5132662171 -7.1531762171
CC017/UncJ f 0.17355 5.2564893256 10.5442909011 -10.1971909011
CC017/UncJ m 0.1488133333 4.291905562 8.6164878208 -8.3188611541
CC018/UncJ f 1.2769666667 4.291905562 9.7446411541 -7.1907078208
CC018/UncJ m 0.25 5.2564893256 10.6207409011 -10.1207409011
CC019/TauUncJ f 1.08836 4.291905562 9.5560344875 -7.3793144875
CC019/TauUncJ m 0.2477525 3.7168992474 7.5809737171 -7.0854687171
CC025/GeniUncJ f 1.5240933333 4.291905562 9.9917678208 -6.9435811541
CC025/GeniUncJ m 0.5980766667 4.291905562 9.0657511541 -7.8695978208
CC027/GeniUncJ f 0.416665 5.2564893256 10.7874059011 -9.9540759011
CC027/GeniUncJ m 0.60106 3.7168992474 7.9342812171 -6.7321612171
CC028/GeniUncJ f 0.7062866667 4.291905562 9.1739611541 -7.7613878208
CC028/GeniUncJ m 0.4018433333 4.291905562 8.8695178208 -8.0658311541
CC030/GeniUncJ f 0.142425 5.2564893256 10.5131659011 -10.2283159011
CC030/GeniUncJ m 0.352565 5.2564893256 10.7233059011 -10.0181759011
CC033/GeniUncJ f 0.7814 5.2564893256 11.1521409011 -9.5893409011
CC033/GeniUncJ m 0.75475 5.2564893256 11.1254909011 -9.6159909011
CC036/UncJ f 1.16079 4.291905562 9.6284644875 -7.3068844875
CC036/UncJ m 2.0024433333 4.291905562 10.4701178208 -6.4652311541
CC037/TauUncJ f 0.600725 5.2564893256 10.9714659011 -9.7700159011
CC037/TauUncJ m 0.37531 4.291905562 8.8429844875 -8.0923644875
CC040/TauUncJ f 0.1471466667 4.291905562 8.6148211541 -8.3205278208
CC040/TauUncJ m 0.26576 5.2564893256 10.6365009011 -10.1049809011
CC041/TauUncJ f 0.8686333333 4.291905562 9.3363078208 -7.5990411541
CC041/TauUncJ m 1.905835 5.2564893256 12.2765759011 -8.4649059011
CC043/GeniUncJ f 0.424585 5.2564893256 10.7953259011 -9.9461559011
CC043/GeniUncJ m 0.8662 5.2564893256 11.2369409011 -9.5045409011
CC057/UncJ f 1.10845 5.2564893256 11.4791909011 -9.2622909011
CC057/UncJ m 2.96985 5.2564893256 13.3405909011 -7.4008909011
CC059/TauUncJ f 1.605455 3.7168992474 8.9386762171 -5.7277662171
CC059/TauUncJ m 1.6309675 3.7168992474 8.9641887171 -5.7022537171
CC061/GeniUncJ f 1.0216866667 4.291905562 9.4893611541 -7.4459878208
CC061/GeniUncJ m 1.109375 5.2564893256 11.4801159011 -9.2613659011
CC078/TauUncJ f 0.31285 4.291905562 8.7805244875 -8.1548244875
CC078/TauUncJ m 0.50999 5.2564893256 10.8807309011 -9.8607509011
CC084/TauJ f 0.787 5.2564893256 11.1577409011 -9.5837409011
CC084/TauJ m 0.62244 5.2564893256 10.9931809011 -9.7483009011
NOD/ShiLtJ f 1.0060125 2.6282446628 6.1913829506 -4.1793579506
NOD/ShiLtJ m 0.7601518182 2.2413745795 5.1822505967 -3.6619469603
NZO/HlLtJ f 0.5997733333 4.291905562 9.0674478208 -7.8679011541
NZO/HlLtJ m 0.49358 5.2564893256 10.8643209011 -9.8771609011
PWK/PhJ f 0.39358375 2.6282446628 5.5789542006 -4.7917867006
PWK/PhJ m 13.841895 2.6282446628 19.0272654506 8.6565245494
WSB/EiJ f 1.043845 2.6282446628 6.2292154506 -4.1415254506
WSB/EiJ m 0.3853733333 3.0348355271 6.3729233843 -5.6021767176


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.0269020833 2.8388286919 6.6277423026 -4.5739381359
A/J both 2.329781 2.2506942645 6.7702669629 -2.1107049629
C57BL/6J both 0.5510677622 1.5227141768 3.555292296 -2.4531567715
CAST/EiJ both 0.5278516429 1.8317079472 4.1417025136 -3.0859992279
CC001/UncJ both 0.5602225 3.3930492696 7.2545069663 -6.1340619663
CC002/UncJ both 0.1921841667 2.8388286919 5.7930243859 -5.4086560526
CC003/UncJ both 0.4555558333 3.3930492696 7.1498402997 -6.238728633
CC005/TauUncJ both 0.6210008333 3.3930492696 7.3152852997 -6.073283633
CC006/TauUncJ both 0.2327725 3.7168992474 7.5659937171 -7.1004487171
CC009/UncJ both 0.3741275 3.7168992474 7.7073487171 -6.9590937171
CC011/UncJ both 1.423855 3.0348355271 7.411405051 -4.563695051
CC013/GeniUncJ both 2.254075 3.7168992474 9.5872962171 -5.0791462171
CC016/GeniUncJ both 0.1789891667 2.8388286919 5.7798293859 -5.4218510526
CC017/UncJ both 0.1611816667 3.3930492696 6.855466133 -6.5331027997
CC018/UncJ both 0.7634833333 3.3930492696 7.4577677997 -5.930801133
CC019/TauUncJ both 0.66805625 2.8388286919 6.2688964692 -4.9327839692
CC025/GeniUncJ both 1.061085 3.0348355271 7.048635051 -4.926465051
CC027/GeniUncJ both 0.5088625 3.2189291715 6.8596183656 -5.8418933656
CC028/GeniUncJ both 0.554065 3.0348355271 6.541615051 -5.433485051
CC030/GeniUncJ both 0.247495 3.7168992474 7.5807162171 -7.0857262171
CC033/GeniUncJ both 0.768075 3.7168992474 8.1012962171 -6.5651462171
CC036/UncJ both 1.5816166667 3.0348355271 7.5691667176 -4.4059333843
CC037/TauUncJ both 0.4880175 3.3930492696 7.1823019663 -6.2062669663
CC040/TauUncJ both 0.2064533333 3.3930492696 6.9007377997 -6.487831133
CC041/TauUncJ both 1.3872341667 3.3930492696 8.081518633 -5.3070502997
CC043/GeniUncJ both 0.6453925 3.7168992474 7.9786137171 -6.6878287171
CC057/UncJ both 2.03915 3.7168992474 9.3723712171 -5.2940712171
CC059/TauUncJ both 1.61821125 2.6282446628 6.8035817006 -3.5671592006
CC061/GeniUncJ both 1.0655308333 3.3930492696 7.7598152997 -5.628753633
CC078/TauUncJ both 0.41142 3.3930492696 7.1057044663 -6.2828644663
CC084/TauJ both 0.70472 3.7168992474 8.0379412171 -6.6285012171
NOD/ShiLtJ both 0.8830821591 1.7270951055 4.2905381132 -2.524373795
NZO/HlLtJ both 0.5466766667 3.3930492696 7.240961133 -6.1476077997
PWK/PhJ both 7.117739375 1.8584496237 10.7843499836 3.4511287664
WSB/EiJ both 0.7146091667 2.0073550187 4.675001266 -3.2457829327




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA