Project measure / variable:   CSNA03   antici_resp_right_cc_rev_JAX

ID, description, units MPD:110512   antici_resp_right_cc_rev_JAX   total number of anticipatory responses in right flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  reversal  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total number of anticipatory responses in right flanking hole without prior successful nose poke in central hole (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means149.6   n 146.6   n
Median of the strain means116.0   n 107.5   n
SD of the strain means± 102.0 ± 140.6
Coefficient of variation (CV)0.6817 0.9589
Min–max range of strain means11.0   –   491.0   n 14.0   –   776.0   n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 19180.9157 19180.9157 0.6246 0.4303
strain 34 1152685.4896 33902.5144 1.1039 0.33
sex:strain 34 870519.145 25603.5043 0.8337 0.7301
Residuals 191 5865832.6566 30711.1657


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 32.333 24.583   3 14.193 0.7603 9.0, 58.0 -1.15
129S1/SvImJ m 50.0 23.281   4 11.64 0.4656 23.0, 76.0 -0.69
A/J f 251.3 246.6   6 100.7 0.9812 58.0, 692.0 1.0
A/J m 169.4 126.1   5 56.38 0.7443 63.0, 339.0 0.16
C57BL/6J f 204.9 283.3   14 75.72 1.3826 20.0, 1146.0 0.54
C57BL/6J m 180.1 184.6   11 55.65 1.0248 36.0, 597.0 0.24
CAST/EiJ f 110.7 126.3   10 39.924 1.1405 11.0, 429.0 -0.38
CAST/EiJ m 145.9 151.7   8 53.62 1.0397 4.0, 457.0 -0.01
CC001/UncJ f 81.0 28.827   3 16.643 0.3559 50.0, 107.0 -0.67
CC001/UncJ m 103.5 119.5   2   84.5 1.1546 19.0, 188.0 -0.31
CC002/UncJ f 180.0 134.8   4 67.42 0.7491 47.0, 368.0 0.3
CC002/UncJ m 113.5 86.57   4 43.287 0.7628 32.0, 233.0 -0.24
CC003/UncJ f 425.0 415.8   2   294.0 0.9783 131.0, 719.0 2.7
CC003/UncJ m 49.333 13.577   3 7.8387 0.2752 41.0, 65.0 -0.69
CC004/TauUncJ f 217.0 0.0   1   0.0 0.0 217.0, 217.0 0.66
CC004/TauUncJ m 162.5 41.719   2   29.5 0.2567 133.0, 192.0 0.11
CC005/TauUncJ f 69.0 20.809   3 12.014 0.3016 45.0, 82.0 -0.79
CC005/TauUncJ m 56.5 50.2   2   35.5 0.8886 21.0, 92.0 -0.64
CC006/TauUncJ f 80.5 72.83   2   51.5 0.9047 29.0, 132.0 -0.68
CC006/TauUncJ m 197.0 35.355   2   25.0 0.1795 172.0, 222.0 0.36
CC007/UncJ f 112.0 0.0   1   0.0 0.0 112.0, 112.0 -0.37
CC008/GeniUncJ f 11.0 0.0   1   0.0 0.0 11.0, 11.0 -1.36
CC008/GeniUncJ m 105.0 0.0   1   0.0 0.0 105.0, 105.0 -0.3
CC009/UncJ f 134.5 150.6   2   106.5 1.1198 28.0, 241.0 -0.15
CC009/UncJ m 51.5 45.962   2   32.5 0.8925 19.0, 84.0 -0.68
CC011/UncJ f 97.0 63.1   3 36.428 0.6505 36.0, 162.0 -0.52
CC011/UncJ m 235.7 101.9   3 58.85 0.4325 162.0, 352.0 0.63
CC012/GeniUncJ f 115.3 50.05   3 28.898 0.434 64.0, 164.0 -0.34
CC012/GeniUncJ m 119.0 0.0   1   0.0 0.0 119.0, 119.0 -0.2
CC013/GeniUncJ f 211.0 79.2   2   56.0 0.3753 155.0, 267.0 0.6
CC013/GeniUncJ m 339.0 362.0   2   256.0 1.068 83.0, 595.0 1.37
CC015/UncJ f 165.0 0.0   1   0.0 0.0 165.0, 165.0 0.15
CC015/UncJ m 14.0 0.0   1   0.0 0.0 14.0, 14.0 -0.94
CC016/GeniUncJ f 54.33 52.55   3 30.339 0.9671 23.0, 115.0 -0.93
CC016/GeniUncJ m 27.5 45.067   4 22.533 1.6388 2.0, 95.0 -0.85
CC017/UncJ f 51.0 62.23   2   44.0 1.2201 7.0, 95.0 -0.97
CC017/UncJ m 89.33 85.98   3 49.64 0.9624 14.0, 183.0 -0.41
CC018/UncJ f 288.3 184.7   3 106.7 0.6407 88.0, 452.0 1.36
CC018/UncJ m 48.5 3.5355   2   2.5 0.0729 46.0, 51.0 -0.7
CC019/TauUncJ f 185.2 195.6   4 97.81 1.0559 18.0, 453.0 0.35
CC019/TauUncJ m 145.2 112.9   4 56.46 0.7774 26.0, 292.0 -0.01
CC023/GeniUncJ f 65.5 9.1924   2   6.5 0.1403 59.0, 72.0 -0.82
CC023/GeniUncJ m 106.0 0.0   1   0.0 0.0 106.0, 106.0 -0.29
CC025/GeniUncJ f 194.0 147.0   3 84.89 0.7579 32.0, 319.0 0.44
CC025/GeniUncJ m 147.3 86.56   3 49.974 0.5875 91.0, 247.0 0.0
CC026/GeniUncJ f 220.0 0.0   1   0.0 0.0 220.0, 220.0 0.69
CC026/GeniUncJ m 339.5 433.5   2   306.5 1.2767 33.0, 646.0 1.37
CC027/GeniUncJ f 130.5 149.2   2   105.5 1.1433 25.0, 236.0 -0.19
CC027/GeniUncJ m 83.5 29.034   4 14.517 0.3477 57.0, 112.0 -0.45
CC028/GeniUncJ f 105.7 68.62   3 39.62 0.6494 43.0, 179.0 -0.43
CC028/GeniUncJ m 89.33 83.86   3 48.419 0.9388 36.0, 186.0 -0.41
CC029/UncJ f 46.0 0.0   1   0.0 0.0 46.0, 46.0 -1.02
CC029/UncJ m 103.0 0.0   1   0.0 0.0 103.0, 103.0 -0.31
CC030/GeniUncJ f 62.5 0.70711   2   0.5 0.0113 62.0, 63.0 -0.85
CC030/GeniUncJ m 80.0 15.556   2   11.0 0.1945 69.0, 91.0 -0.47
CC032/GeniUncJ f 116.0 33.941   2   24.0 0.2926 92.0, 140.0 -0.33
CC033/GeniUncJ f 141.5 135.1   2   95.5 0.9545 46.0, 237.0 -0.08
CC033/GeniUncJ m 102.5 85.56   2   60.5 0.8347 42.0, 163.0 -0.31
CC035/UncJ m 81.0 0.0   1   0.0 0.0 81.0, 81.0 -0.47
CC036/UncJ f 110.3 55.87   3 32.256 0.5064 61.0, 171.0 -0.39
CC036/UncJ m 183.0 67.29   3 38.85 0.3677 107.0, 235.0 0.26
CC037/TauUncJ f 111.5 50.2   2   35.5 0.4503 76.0, 147.0 -0.37
CC037/TauUncJ m 50.33 50.21   3 28.99 0.9976 3.0, 103.0 -0.68
CC040/TauUncJ f 71.0 63.64   2   45.0 0.8963 26.0, 116.0 -0.77
CC040/TauUncJ m 75.33 18.717   3 10.806 0.2485 54.0, 89.0 -0.51
CC041/TauUncJ f 172.0 141.7   3 81.83 0.824 49.0, 327.0 0.22
CC041/TauUncJ m 122.0 77.78   2   55.0 0.6376 67.0, 177.0 -0.18
CC043/GeniUncJ f 88.5 92.63   2   65.5 1.0467 23.0, 154.0 -0.6
CC043/GeniUncJ m 180.5 106.8   2   75.5 0.5915 105.0, 256.0 0.24
CC044/UncJ f 66.0 0.0   1   0.0 0.0 66.0, 66.0 -0.82
CC051/TauUncJ f 385.0 0.0   1   0.0 0.0 385.0, 385.0 2.31
CC051/TauUncJ m 375.0 0.0   1   0.0 0.0 375.0, 375.0 1.62
CC057/UncJ f 98.0 45.255   2   32.0 0.4618 66.0, 130.0 -0.51
CC057/UncJ m 124.5 54.45   2   38.5 0.4373 86.0, 163.0 -0.16
CC059/TauUncJ f 231.0 127.9   4 63.94 0.5536 109.0, 411.0 0.8
CC059/TauUncJ m 279.0 97.39   5 43.555 0.3491 146.0, 414.0 0.94
CC060/UncJ f 126.0 0.0   1   0.0 0.0 126.0, 126.0 -0.23
CC060/UncJ m 66.0 0.0   1   0.0 0.0 66.0, 66.0 -0.57
CC061/GeniUncJ f 180.0 48.218   3 27.839 0.2679 125.0, 215.0 0.3
CC061/GeniUncJ m 776.0 748.1   2   529.0 0.9641 247.0, 1305.0 4.48
CC074/UncJ f 491.0 0.0   1   0.0 0.0 491.0, 491.0 3.35
CC074/UncJ m 612.0 0.0   1   0.0 0.0 612.0, 612.0 3.31
CC075/UncJ f 37.5 34.648   2   24.5 0.924 13.0, 62.0 -1.1
CC075/UncJ m 23.0 0.0   1   0.0 0.0 23.0, 23.0 -0.88
CC078/TauUncJ f 55.67 36.91   3 21.31 0.6631 26.0, 97.0 -0.92
CC078/TauUncJ m 39.333 20.033   3 11.566 0.5093 20.0, 60.0 -0.76
CC079/TauUncJ f 323.0 0.0   1   0.0 0.0 323.0, 323.0 1.7
CC079/TauUncJ m 35.5 9.1924   2   6.5 0.2589 29.0, 42.0 -0.79
CC080/TauUncJ f 50.0 5.6569   2   4.0 0.1131 46.0, 54.0 -0.98
CC080/TauUncJ m 138.0 0.0   1   0.0 0.0 138.0, 138.0 -0.06
CC084/TauJ f 282.0 308.3   2   218.0 1.0933 64.0, 500.0 1.3
CC084/TauJ m 108.5 0.70711   2   0.5 0.0065 108.0, 109.0 -0.27
NOD/ShiLtJ f 160.0 95.75   8 33.853 0.5984 19.0, 297.0 0.1
NOD/ShiLtJ m 131.5 113.4   11 34.18 0.8618 6.0, 346.0 -0.11
NZO/HlLtJ f 77.67 47.014   3 27.144 0.6053 39.0, 130.0 -0.71
NZO/HlLtJ m 107.5 120.9   2   85.5 1.1248 22.0, 193.0 -0.28
PWK/PhJ f 201.3 423.7   9 141.2 2.1044 11.0, 1323.0 0.51
PWK/PhJ m 150.9 244.7   8 86.51 1.6219 10.0, 744.0 0.03
WSB/EiJ f 152.6 58.61   8 20.723 0.384 51.0, 215.0 0.03
WSB/EiJ m 72.67 56.43   6 23.037 0.7766 8.0, 153.0 -0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 32.3333333333 101.1783338819 231.9037511034 -167.2370844368
129S1/SvImJ m 50.0 87.6230074543 222.8330516328 -122.8330516328
A/J f 251.3333333333 71.5438859971 392.4509290628 110.2157376039
A/J m 169.4 78.3724004243 323.9865808838 14.8134191162
C57BL/6J f 204.9285714286 46.8364675847 297.3117234743 112.5454193828
C57BL/6J m 180.0909090909 52.838661587 284.3131606615 75.8686575204
CAST/EiJ f 110.7 55.4176557979 220.0092196234 1.3907803766
CAST/EiJ m 145.875 61.9588227589 268.0864228227 23.6635771773
CC001/UncJ f 81.0 101.1783338819 280.5704177701 -118.5704177701
CC001/UncJ m 103.5 123.9176455178 347.9228456454 -140.9228456454
CC002/UncJ f 180.0 87.6230074543 352.8330516328 7.1669483672
CC002/UncJ m 113.5 87.6230074543 286.3330516328 -59.3330516328
CC003/UncJ f 425.0 123.9176455178 669.4228456454 180.5771543546
CC003/UncJ m 49.3333333333 101.1783338819 248.9037511034 -150.2370844367
CC005/TauUncJ f 69.0 101.1783338819 268.5704177701 -130.5704177701
CC005/TauUncJ m 56.5 123.9176455178 300.9228456454 -187.9228456454
CC006/TauUncJ f 80.5 123.9176455178 324.9228456454 -163.9228456454
CC006/TauUncJ m 197.0 123.9176455178 441.4228456454 -47.4228456454
CC009/UncJ f 134.5 123.9176455178 378.9228456454 -109.9228456454
CC009/UncJ m 51.5 123.9176455178 295.9228456454 -192.9228456454
CC011/UncJ f 97.0 101.1783338819 296.5704177701 -102.5704177701
CC011/UncJ m 235.6666666667 101.1783338819 435.2370844368 36.0962488966
CC013/GeniUncJ f 211.0 123.9176455178 455.4228456454 -33.4228456454
CC013/GeniUncJ m 339.0 123.9176455178 583.4228456454 94.5771543546
CC016/GeniUncJ f 54.3333333333 101.1783338819 253.9037511034 -145.2370844368
CC016/GeniUncJ m 27.5 87.6230074543 200.3330516328 -145.3330516328
CC017/UncJ f 51.0 123.9176455178 295.4228456454 -193.4228456454
CC017/UncJ m 89.3333333333 101.1783338819 288.9037511034 -110.2370844368
CC018/UncJ f 288.3333333333 101.1783338819 487.9037511034 88.7629155633
CC018/UncJ m 48.5 123.9176455178 292.9228456454 -195.9228456454
CC019/TauUncJ f 185.25 87.6230074543 358.0830516328 12.4169483672
CC019/TauUncJ m 145.25 87.6230074543 318.0830516328 -27.5830516328
CC025/GeniUncJ f 194.0 101.1783338819 393.5704177701 -5.5704177701
CC025/GeniUncJ m 147.3333333333 101.1783338819 346.9037511034 -52.2370844368
CC027/GeniUncJ f 130.5 123.9176455178 374.9228456454 -113.9228456454
CC027/GeniUncJ m 83.5 87.6230074543 256.3330516328 -89.3330516328
CC028/GeniUncJ f 105.6666666667 101.1783338819 305.2370844367 -93.9037511034
CC028/GeniUncJ m 89.3333333333 101.1783338819 288.9037511034 -110.2370844368
CC030/GeniUncJ f 62.5 123.9176455178 306.9228456454 -181.9228456454
CC030/GeniUncJ m 80.0 123.9176455178 324.4228456454 -164.4228456454
CC033/GeniUncJ f 141.5 123.9176455178 385.9228456454 -102.9228456454
CC033/GeniUncJ m 102.5 123.9176455178 346.9228456454 -141.9228456454
CC036/UncJ f 110.3333333333 101.1783338819 309.9037511034 -89.2370844368
CC036/UncJ m 183.0 101.1783338819 382.5704177701 -16.5704177701
CC037/TauUncJ f 111.5 123.9176455178 355.9228456454 -132.9228456454
CC037/TauUncJ m 50.3333333333 101.1783338819 249.9037511034 -149.2370844368
CC040/TauUncJ f 71.0 123.9176455178 315.4228456454 -173.4228456454
CC040/TauUncJ m 75.3333333333 101.1783338819 274.9037511034 -124.2370844367
CC041/TauUncJ f 172.0 101.1783338819 371.5704177701 -27.5704177701
CC041/TauUncJ m 122.0 123.9176455178 366.4228456454 -122.4228456454
CC043/GeniUncJ f 88.5 123.9176455178 332.9228456454 -155.9228456454
CC043/GeniUncJ m 180.5 123.9176455178 424.9228456454 -63.9228456454
CC057/UncJ f 98.0 123.9176455178 342.4228456454 -146.4228456454
CC057/UncJ m 124.5 123.9176455178 368.9228456454 -119.9228456454
CC059/TauUncJ f 231.0 87.6230074543 403.8330516328 58.1669483672
CC059/TauUncJ m 279.0 78.3724004243 433.5865808838 124.4134191162
CC061/GeniUncJ f 180.0 101.1783338819 379.5704177701 -19.5704177701
CC061/GeniUncJ m 776.0 123.9176455178 1020.4228456454 531.5771543546
CC078/TauUncJ f 55.6666666667 101.1783338819 255.2370844368 -143.9037511034
CC078/TauUncJ m 39.3333333333 101.1783338819 238.9037511034 -160.2370844368
CC084/TauJ f 282.0 123.9176455178 526.4228456454 37.5771543546
CC084/TauJ m 108.5 123.9176455178 352.9228456454 -135.9228456454
NOD/ShiLtJ f 160.0 61.9588227589 282.2114228227 37.7885771773
NOD/ShiLtJ m 131.5454545455 52.838661587 235.767706116 27.3232029749
NZO/HlLtJ f 77.6666666667 101.1783338819 277.2370844367 -121.9037511034
NZO/HlLtJ m 107.5 123.9176455178 351.9228456454 -136.9228456454
PWK/PhJ f 201.3333333333 58.4153383029 316.5553677552 86.1112989115
PWK/PhJ m 150.875 61.9588227589 273.0864228227 28.6635771773
WSB/EiJ f 152.625 61.9588227589 274.8364228227 30.4135771773
WSB/EiJ m 72.6666666667 71.5438859971 213.7842623961 -68.4509290628


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 41.1666666667 66.9231773799 173.1700902829 -90.8367569496
A/J both 210.3666666667 53.0583659092 315.0222766618 105.7110566715
C57BL/6J both 192.5097402597 35.3043157918 262.1461612339 122.8733192856
CAST/EiJ both 128.2875 41.5632418484 210.2694147176 46.3055852824
CC001/UncJ both 92.25 79.988496232 250.0242684362 -65.5242684362
CC002/UncJ both 146.75 61.9588227589 268.9614228227 24.5385771773
CC003/UncJ both 237.1666666667 79.988496232 394.9409351029 79.3923982305
CC005/TauUncJ both 62.75 79.988496232 220.5242684362 -95.0242684362
CC006/TauUncJ both 138.75 87.6230074543 311.5830516328 -34.0830516328
CC009/UncJ both 93.0 87.6230074543 265.8330516328 -79.8330516328
CC011/UncJ both 166.3333333333 71.5438859971 307.4509290628 25.2157376039
CC013/GeniUncJ both 275.0 87.6230074543 447.8330516328 102.1669483672
CC016/GeniUncJ both 40.9166666667 66.9231773799 172.9200902829 -91.0867569496
CC017/UncJ both 70.1666666667 79.988496232 227.9409351029 -87.6076017695
CC018/UncJ both 168.4166666667 79.988496232 326.1909351029 10.6423982305
CC019/TauUncJ both 165.25 61.9588227589 287.4614228227 43.0385771773
CC025/GeniUncJ both 170.6666666667 71.5438859971 311.7842623961 29.5490709372
CC027/GeniUncJ both 107.0 75.8837504114 256.6778133276 -42.6778133276
CC028/GeniUncJ both 97.5 71.5438859971 238.6175957295 -43.6175957295
CC030/GeniUncJ both 71.25 87.6230074543 244.0830516328 -101.5830516328
CC033/GeniUncJ both 122.0 87.6230074543 294.8330516328 -50.8330516328
CC036/UncJ both 146.6666666667 71.5438859971 287.7842623961 5.5490709372
CC037/TauUncJ both 80.9166666667 79.988496232 238.6909351029 -76.8576017695
CC040/TauUncJ both 73.1666666667 79.988496232 230.9409351029 -84.6076017695
CC041/TauUncJ both 147.0 79.988496232 304.7742684362 -10.7742684362
CC043/GeniUncJ both 134.5 87.6230074543 307.3330516328 -38.3330516328
CC057/UncJ both 111.25 87.6230074543 284.0830516328 -61.5830516328
CC059/TauUncJ both 255.0 58.7793003183 370.9399356629 139.0600643371
CC061/GeniUncJ both 478.0 79.988496232 635.7742684362 320.2257315638
CC078/TauUncJ both 47.5 71.5438859971 188.6175957295 -93.6175957295
CC084/TauJ both 195.25 87.6230074543 368.0830516328 22.4169483672
NOD/ShiLtJ both 145.7727272727 40.7149231731 226.081365648 65.4640888974
NZO/HlLtJ both 92.5833333333 79.988496232 250.3576017695 -65.1909351029
PWK/PhJ both 176.1041666667 42.5771284457 260.0859341592 92.1223991742
WSB/EiJ both 112.6458333333 47.3218325439 205.9863493122 19.3053173545




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA