Project measure / variable:   CSNA03   antici_resp_right_cc_acq_JAX

ID, description, units MPD:110511   antici_resp_right_cc_acq_JAX   total number of anticipatory responses in right flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  acquisition  
Data set, strains CSNA03   CC w/par   51 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total number of anticipatory responses in right flanking hole without prior successful nose poke in central hole (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested50 strains48 strains
Mean of the strain means81.84   n 87.64   n
Median of the strain means53.0   n 38.25   n
SD of the strain means± 94.55 ± 233.2
Coefficient of variation (CV)1.1553 2.6614
Min–max range of strain means2.0   –   509.0   n 1.0   –   1629.0   n
Mean sample size per strain3.0   mice 2.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 225795.3519 225795.3519 0.3862 0.5351
strain 33 8019581.0374 243017.6072 0.4156 0.9981
sex:strain 33 9284716.9849 281355.0601 0.4812 0.9926
Residuals 181 105832558.5134 584710.268


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 53.67 57.42   3 33.153 1.07 5.0, 117.0 -0.3
129S1/SvImJ m 37.25 50.06   4 25.028 1.3438 1.0, 111.0 -0.22
A/J f 210.3 207.7   6 84.78 0.9874 7.0, 614.0 1.36
A/J m 144.6 95.25   5 42.596 0.6587 46.0, 289.0 0.24
C57BL/6J f 73.15 57.29   13 15.889 0.7831 7.0, 208.0 -0.09
C57BL/6J m 15.727 14.276   11 4.3045 0.9078 2.0, 51.0 -0.31
CAST/EiJ f 53.0 47.749   10 15.1 0.9009 2.0, 127.0 -0.3
CAST/EiJ m 77.86 65.04   7 24.583 0.8354 13.0, 160.0 -0.04
CC001/UncJ f 17.667 9.0738   3 5.2387 0.5136 11.0, 28.0 -0.68
CC001/UncJ m 41.0 11.314   2   8.0 0.2759 33.0, 49.0 -0.2
CC002/UncJ f 9.6667 9.2916   3 5.3645 0.9612 2.0, 20.0 -0.76
CC002/UncJ m 13.25 16.029   4 8.0143 1.2097 2.0, 36.0 -0.32
CC003/UncJ f 28.5 24.749   2   17.5 0.8684 11.0, 46.0 -0.56
CC003/UncJ m 24.0 14.0   3 8.0829 0.5833 10.0, 38.0 -0.27
CC004/TauUncJ f 182.0 0.0   1   0.0 0.0 182.0, 182.0 1.06
CC004/TauUncJ m 71.0 82.02   2   58.0 1.1553 13.0, 129.0 -0.07
CC005/TauUncJ f 106.3 92.22   3 53.24 0.8673 4.0, 183.0 0.26
CC005/TauUncJ m 7.0 4.2426   2   3.0 0.6061 4.0, 10.0 -0.35
CC006/TauUncJ f 35.5 28.991   2   20.5 0.8167 15.0, 56.0 -0.49
CC006/TauUncJ m 38.0 52.33   2   37.0 1.377 1.0, 75.0 -0.21
CC007/UncJ f 10.0 0.0   1   0.0 0.0 10.0, 10.0 -0.76
CC008/GeniUncJ f 2.0 0.0   1   0.0 0.0 2.0, 2.0 -0.84
CC008/GeniUncJ m 5.0 0.0   1   0.0 0.0 5.0, 5.0 -0.35
CC009/UncJ f 24.0 25.456   2   18.0 1.0607 6.0, 42.0 -0.61
CC009/UncJ m 3.5 3.5355   2   2.5 1.0102 1.0, 6.0 -0.36
CC011/UncJ f 140.3 56.0   3 32.333 0.3991 108.0, 205.0 0.62
CC011/UncJ m 36.0 7.0711   2   5.0 0.1964 31.0, 41.0 -0.22
CC012/GeniUncJ f 33.667 47.12   3 27.205 1.3996 4.0, 88.0 -0.51
CC012/GeniUncJ m 74.0 0.0   1   0.0 0.0 74.0, 74.0 -0.06
CC013/GeniUncJ f 231.5 193.0   2   136.5 0.8339 95.0, 368.0 1.58
CC013/GeniUncJ m 176.5 130.8   2   92.5 0.7412 84.0, 269.0 0.38
CC015/UncJ f 509.0 0.0   1   0.0 0.0 509.0, 509.0 4.52
CC015/UncJ m 8.0 0.0   1   0.0 0.0 8.0, 8.0 -0.34
CC016/GeniUncJ f 19.333 15.695   3 9.0615 0.8118 7.0, 37.0 -0.66
CC016/GeniUncJ m 13.75 19.704   4 9.852 1.433 2.0, 43.0 -0.32
CC017/UncJ f 5.5 4.9497   2   3.5 0.9 2.0, 9.0 -0.81
CC017/UncJ m 3.6667 2.3094   3 1.3333 0.6298 1.0, 5.0 -0.36
CC018/UncJ f 140.5 170.4   2   120.5 1.2129 20.0, 261.0 0.62
CC018/UncJ m 13.5 17.678   2   12.5 1.3095 1.0, 26.0 -0.32
CC019/TauUncJ f 57.0 40.258   4 20.129 0.7063 3.0, 96.0 -0.26
CC019/TauUncJ m 20.5 19.774   4 9.8869 0.9646 3.0, 45.0 -0.29
CC023/GeniUncJ f 126.0 171.1   2   121.0 1.3581 5.0, 247.0 0.47
CC023/GeniUncJ m 259.0 0.0   1   0.0 0.0 259.0, 259.0 0.73
CC025/GeniUncJ f 127.7 53.3   3 30.775 0.4175 67.0, 167.0 0.49
CC025/GeniUncJ m 36.333 29.006   3 16.746 0.7983 7.0, 65.0 -0.22
CC026/GeniUncJ f 4.0 0.0   1   0.0 0.0 4.0, 4.0 -0.82
CC026/GeniUncJ m 100.0 132.9   2   94.0 1.3294 6.0, 194.0 0.05
CC027/GeniUncJ f 8.0 2.8284   2   2.0 0.3536 6.0, 10.0 -0.78
CC027/GeniUncJ m 38.5 23.868   4 11.934 0.6199 13.0, 67.0 -0.21
CC028/GeniUncJ f 146.7 148.7   3 85.83 1.0136 43.0, 317.0 0.69
CC028/GeniUncJ m 61.0 51.86   3 29.939 0.8501 6.0, 109.0 -0.11
CC029/UncJ f 111.0 0.0   1   0.0 0.0 111.0, 111.0 0.31
CC029/UncJ m 52.0 0.0   1   0.0 0.0 52.0, 52.0 -0.15
CC030/GeniUncJ f 11.5 6.364   2   4.5 0.5534 7.0, 16.0 -0.74
CC030/GeniUncJ m 11.5 7.7782   2   5.5 0.6764 6.0, 17.0 -0.33
CC032/GeniUncJ f 53.0 72.12   2   51.0 1.3608 2.0, 104.0 -0.3
CC033/GeniUncJ f 90.5 67.18   2   47.5 0.7423 43.0, 138.0 0.09
CC033/GeniUncJ m 47.0 31.113   2   22.0 0.662 25.0, 69.0 -0.17
CC035/UncJ m 78.0 0.0   1   0.0 0.0 78.0, 78.0 -0.04
CC036/UncJ f 95.67 60.01   3 34.647 0.6273 43.0, 161.0 0.15
CC036/UncJ m 102.7 85.68   3 49.465 0.8345 10.0, 179.0 0.06
CC037/TauUncJ f 22.0 24.042   2   17.0 1.0928 5.0, 39.0 -0.63
CC037/TauUncJ m 9.6667 14.154   3 8.1718 1.4642 1.0, 26.0 -0.33
CC040/TauUncJ f 6.0 3.4641   3 2.0 0.5774 4.0, 10.0 -0.8
CC040/TauUncJ m 27.0 25.456   2   18.0 0.9428 9.0, 45.0 -0.26
CC041/TauUncJ f 70.67 79.66   3 45.99 1.1272 2.0, 158.0 -0.12
CC041/TauUncJ m 65.0 73.54   2   52.0 1.1314 13.0, 117.0 -0.1
CC043/GeniUncJ f 19.5 2.1213   2   1.5 0.1088 18.0, 21.0 -0.66
CC043/GeniUncJ m 153.0 199.4   2   141.0 1.3033 12.0, 294.0 0.28
CC051/TauUncJ f 40.0 0.0   1   0.0 0.0 40.0, 40.0 -0.44
CC051/TauUncJ m 57.0 0.0   1   0.0 0.0 57.0, 57.0 -0.13
CC057/UncJ f 41.0 0.0   1   0.0 0.0 41.0, 41.0 -0.43
CC057/UncJ m 65.0 42.426   2   30.0 0.6527 35.0, 95.0 -0.1
CC059/TauUncJ f 263.5 347.1   4 173.6 1.3173 79.0, 784.0 1.92
CC059/TauUncJ m 147.6 163.2   5 73.0 1.106 16.0, 430.0 0.26
CC060/UncJ f 11.0 0.0   1   0.0 0.0 11.0, 11.0 -0.75
CC060/UncJ m 50.0 0.0   1   0.0 0.0 50.0, 50.0 -0.16
CC061/GeniUncJ f 313.3 290.8   3 167.9 0.9281 15.0, 596.0 2.45
CC061/GeniUncJ m 111.5 70.0   2   49.5 0.6278 62.0, 161.0 0.1
CC074/UncJ f 143.0 0.0   1   0.0 0.0 143.0, 143.0 0.65
CC074/UncJ m 25.0 0.0   1   0.0 0.0 25.0, 25.0 -0.27
CC075/UncJ f 8.0 0.0   1   0.0 0.0 8.0, 8.0 -0.78
CC075/UncJ m 1.0 0.0   1   0.0 0.0 1.0, 1.0 -0.37
CC078/TauUncJ f 40.333 38.188   3 22.048 0.9468 7.0, 82.0 -0.44
CC078/TauUncJ m 18.0 25.239   3 14.572 1.4022 1.0, 47.0 -0.3
CC079/TauUncJ f 88.0 0.0   1   0.0 0.0 88.0, 88.0 0.07
CC079/TauUncJ m 29.0 16.971   2   12.0 0.5852 17.0, 41.0 -0.25
CC080/TauUncJ f 17.0 12.728   2   9.0 0.7487 8.0, 26.0 -0.69
CC084/TauJ f 84.0 111.7   2   79.0 1.33 5.0, 163.0 0.02
CC084/TauJ m 102.0 127.3   2   90.0 1.2478 12.0, 192.0 0.06
NOD/ShiLtJ f 55.25 51.62   8 18.249 0.9342 3.0, 149.0 -0.28
NOD/ShiLtJ m 69.4 93.52   10 29.573 1.3475 3.0, 297.0 -0.08
NZO/HlLtJ f 23.0 30.512   3 17.616 1.3266 2.0, 58.0 -0.62
NZO/HlLtJ m 17.5 0.70711   2   0.5 0.0404 17.0, 18.0 -0.3
PWK/PhJ f 46.875 90.77   8 32.093 1.9365 2.0, 270.0 -0.37
PWK/PhJ m 1629.0 4170.0   7 1576.0 2.5593 3.0, 11084.0 6.61
WSB/EiJ f 82.75 99.48   8 35.171 1.2022 38.0, 328.0 0.01
WSB/EiJ m 20.0 20.12   6 8.2138 1.006 4.0, 50.0 -0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 53.6666666667 441.4786774881 924.7734281154 -817.4400947821
129S1/SvImJ m 37.25 382.3317499338 791.650584823 -717.150584823
A/J f 210.3333333333 312.1725666011 826.2988314912 -405.6321648245
A/J m 144.6 341.9679131234 819.3563959719 -530.1563959719
C57BL/6J f 73.1538461538 212.0794967114 491.6199985876 -345.3123062799
C57BL/6J m 15.7272727273 230.5547199946 470.6479420877 -439.1933966332
CAST/EiJ f 53.0 241.8078303178 530.1248232407 -424.1248232407
CAST/EiJ m 77.8571428571 289.0156367569 648.1303818181 -492.4160961038
CC001/UncJ f 17.6666666667 441.4786774881 888.7734281154 -853.4400947821
CC001/UncJ m 41.0 540.6987460823 1107.8835385189 -1025.8835385189
CC002/UncJ f 9.6666666667 441.4786774881 880.7734281154 -861.4400947821
CC002/UncJ m 13.25 382.3317499338 767.650584823 -741.150584823
CC003/UncJ f 28.5 540.6987460823 1095.3835385189 -1038.3835385189
CC003/UncJ m 24.0 441.4786774881 895.1067614487 -847.1067614487
CC005/TauUncJ f 106.3333333333 441.4786774881 977.4400947821 -764.7734281154
CC005/TauUncJ m 7.0 540.6987460823 1073.8835385189 -1059.8835385189
CC006/TauUncJ f 35.5 540.6987460823 1102.3835385189 -1031.3835385189
CC006/TauUncJ m 38.0 540.6987460823 1104.8835385189 -1028.8835385189
CC009/UncJ f 24.0 540.6987460823 1090.8835385189 -1042.8835385189
CC009/UncJ m 3.5 540.6987460823 1070.3835385189 -1063.3835385189
CC011/UncJ f 140.3333333333 441.4786774881 1011.4400947821 -730.7734281154
CC011/UncJ m 36.0 540.6987460823 1102.8835385189 -1030.8835385189
CC013/GeniUncJ f 231.5 540.6987460823 1298.3835385189 -835.3835385189
CC013/GeniUncJ m 176.5 540.6987460823 1243.3835385189 -890.3835385189
CC016/GeniUncJ f 19.3333333333 441.4786774881 890.4400947821 -851.7734281154
CC016/GeniUncJ m 13.75 382.3317499338 768.150584823 -740.650584823
CC017/UncJ f 5.5 540.6987460823 1072.3835385189 -1061.3835385189
CC017/UncJ m 3.6666666667 441.4786774881 874.7734281154 -867.4400947821
CC018/UncJ f 140.5 540.6987460823 1207.3835385189 -926.3835385189
CC018/UncJ m 13.5 540.6987460823 1080.3835385189 -1053.3835385189
CC019/TauUncJ f 57.0 382.3317499338 811.400584823 -697.400584823
CC019/TauUncJ m 20.5 382.3317499338 774.900584823 -733.900584823
CC025/GeniUncJ f 127.6666666667 441.4786774881 998.7734281154 -743.4400947821
CC025/GeniUncJ m 36.3333333333 441.4786774881 907.4400947821 -834.7734281154
CC027/GeniUncJ f 8.0 540.6987460823 1074.8835385189 -1058.8835385189
CC027/GeniUncJ m 38.5 382.3317499338 792.900584823 -715.900584823
CC028/GeniUncJ f 146.6666666667 441.4786774881 1017.7734281154 -724.4400947821
CC028/GeniUncJ m 61.0 441.4786774881 932.1067614487 -810.1067614487
CC030/GeniUncJ f 11.5 540.6987460823 1078.3835385189 -1055.3835385189
CC030/GeniUncJ m 11.5 540.6987460823 1078.3835385189 -1055.3835385189
CC033/GeniUncJ f 90.5 540.6987460823 1157.3835385189 -976.3835385189
CC033/GeniUncJ m 47.0 540.6987460823 1113.8835385189 -1019.8835385189
CC036/UncJ f 95.6666666667 441.4786774881 966.7734281154 -775.4400947821
CC036/UncJ m 102.6666666667 441.4786774881 973.7734281154 -768.4400947821
CC037/TauUncJ f 22.0 540.6987460823 1088.8835385189 -1044.8835385189
CC037/TauUncJ m 9.6666666667 441.4786774881 880.7734281154 -861.4400947821
CC040/TauUncJ f 6.0 441.4786774881 877.1067614487 -865.1067614487
CC040/TauUncJ m 27.0 540.6987460823 1093.8835385189 -1039.8835385189
CC041/TauUncJ f 70.6666666667 441.4786774881 941.7734281154 -800.4400947821
CC041/TauUncJ m 65.0 540.6987460823 1131.8835385189 -1001.8835385189
CC043/GeniUncJ f 19.5 540.6987460823 1086.3835385189 -1047.3835385189
CC043/GeniUncJ m 153.0 540.6987460823 1219.8835385189 -913.8835385189
CC059/TauUncJ f 263.5 382.3317499338 1017.900584823 -490.900584823
CC059/TauUncJ m 147.6 341.9679131234 822.3563959719 -527.1563959719
CC061/GeniUncJ f 313.3333333333 441.4786774881 1184.4400947821 -557.7734281154
CC061/GeniUncJ m 111.5 540.6987460823 1178.3835385189 -955.3835385189
CC078/TauUncJ f 40.3333333333 441.4786774881 911.4400947821 -830.7734281154
CC078/TauUncJ m 18.0 441.4786774881 889.1067614487 -853.1067614487
CC084/TauJ f 84.0 540.6987460823 1150.8835385189 -982.8835385189
CC084/TauJ m 102.0 540.6987460823 1168.8835385189 -964.8835385189
NOD/ShiLtJ f 55.25 270.3493730411 588.6917692594 -478.1917692594
NOD/ShiLtJ m 69.4 241.8078303178 546.5248232407 -407.7248232407
NZO/HlLtJ f 23.0 441.4786774881 894.1067614487 -848.1067614487
NZO/HlLtJ m 17.5 540.6987460823 1084.3835385189 -1049.3835385189
PWK/PhJ f 46.875 270.3493730411 580.3167692594 -486.5667692594
PWK/PhJ m 1629.1428571429 289.0156367569 2199.4160961038 1058.8696181819
WSB/EiJ f 82.75 270.3493730411 616.1917692594 -450.6917692594
WSB/EiJ m 20.0 312.1725666011 635.9654981579 -595.9654981579


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 45.4583333333 292.0106974428 621.6412973784 -530.7246307117
A/J both 177.4666666667 231.513371614 634.2789062208 -279.3455728875
C57BL/6J both 44.4405594406 156.6310887381 353.4982952053 -264.6171763242
CAST/EiJ both 65.4285714286 188.4151434287 437.2012385343 -306.3440956771
CC001/UncJ both 29.3333333333 349.0195398153 718.0036961711 -659.3370295044
CC002/UncJ both 11.4583333333 292.0106974428 587.6412973784 -564.7246307117
CC003/UncJ both 26.25 349.0195398153 714.9203628377 -662.4203628377
CC005/TauUncJ both 56.6666666667 349.0195398153 745.3370295044 -632.0036961711
CC006/TauUncJ both 36.75 382.3317499338 791.150584823 -717.650584823
CC009/UncJ both 13.75 382.3317499338 768.150584823 -740.650584823
CC011/UncJ both 88.1666666667 349.0195398153 776.8370295044 -600.5036961711
CC013/GeniUncJ both 204.0 382.3317499338 958.400584823 -550.400584823
CC016/GeniUncJ both 16.5416666667 292.0106974428 592.7246307117 -559.6412973784
CC017/UncJ both 4.5833333333 349.0195398153 693.2536961711 -684.0870295044
CC018/UncJ both 77.0 382.3317499338 831.400584823 -677.400584823
CC019/TauUncJ both 38.75 270.3493730411 572.1917692594 -494.6917692594
CC025/GeniUncJ both 82.0 312.1725666011 697.9654981579 -533.9654981579
CC027/GeniUncJ both 23.25 331.1090081161 676.5800710866 -630.0800710865
CC028/GeniUncJ both 103.8333333333 312.1725666011 719.7988314912 -512.1321648245
CC030/GeniUncJ both 11.5 382.3317499338 765.900584823 -742.900584823
CC033/GeniUncJ both 68.75 382.3317499338 823.150584823 -685.650584823
CC036/UncJ both 99.1666666667 312.1725666011 715.1321648245 -516.7988314912
CC037/TauUncJ both 15.8333333333 349.0195398153 704.5036961711 -672.8370295044
CC040/TauUncJ both 16.5 349.0195398153 705.1703628377 -672.1703628377
CC041/TauUncJ both 67.8333333333 349.0195398153 756.5036961711 -620.8370295044
CC043/GeniUncJ both 86.25 382.3317499338 840.650584823 -668.150584823
CC059/TauUncJ both 205.55 256.4759348426 711.6172969789 -300.5172969789
CC061/GeniUncJ both 212.4166666667 349.0195398153 901.0870295044 -476.2536961711
CC078/TauUncJ both 29.1666666667 312.1725666011 645.1321648245 -586.7988314912
CC084/TauJ both 93.0 382.3317499338 847.400584823 -661.400584823
NOD/ShiLtJ both 62.325 181.3558727383 420.1686174306 -295.5186174306
NZO/HlLtJ both 20.25 349.0195398153 708.9203628377 -668.4203628377
PWK/PhJ both 838.0089285714 197.8754796543 1228.448324722 447.5695324209
WSB/EiJ both 51.375 206.4827443408 458.7978810804 -356.0478810804




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA