Project measure / variable:   CSNA03   reward_time_cc_acq_JAX

ID, description, units MPD:110507   reward_time_cc_acq_JAX   latency to retrieve reward per total correct responses (reversal learning assay), CC   [centiseconds/n]  acquisition  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - latency to retrieve reward per total correct responses (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means191.4   centiseconds/n 200.5   centiseconds/n
Median of the strain means179.3   centiseconds/n 197.2   centiseconds/n
SD of the strain means± 68.45 ± 57.18
Coefficient of variation (CV)0.3576 0.2852
Min–max range of strain means94.12   –   399.4   centiseconds/n 101.7   –   384.8   centiseconds/n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3.1131 3.1131 0.0009 0.9756
strain 34 514884.9541 15143.6751 4.5605 < 0.0001
sex:strain 34 102497.2556 3014.6252 0.9079 0.6182
Residuals 192 637551.7503 3320.582


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 175.6 41.472   3 23.944 0.2362 134.9, 217.8 -0.23
129S1/SvImJ m 173.6 54.79   4 27.393 0.3155 95.22, 213.4 -0.47
A/J f 265.9 81.69   6 33.349 0.3072 160.9, 358.4 1.09
A/J m 244.1 58.25   5 26.049 0.2386 184.6, 323.6 0.76
C57BL/6J f 244.1 63.86   14 17.067 0.2616 149.5, 365.1 0.77
C57BL/6J m 253.7 80.42   11 24.247 0.3169 135.1, 442.6 0.93
CAST/EiJ f 201.1 22.808   10 7.2126 0.1134 160.8, 237.7 0.14
CAST/EiJ m 255.9 54.99   8 19.441 0.2149 158.0, 314.1 0.97
CC001/UncJ f 206.3 7.881   3 4.5501 0.0382 201.7, 215.4 0.22
CC001/UncJ m 126.8 6.4347   2   4.55 0.0507 122.3, 131.4 -1.29
CC002/UncJ f 190.1 41.462   4 20.731 0.2181 165.4, 252.1 -0.02
CC002/UncJ m 154.0 56.46   4 28.228 0.3666 97.62, 230.2 -0.81
CC003/UncJ f 159.6 41.295   2   29.2 0.2587 130.4, 188.8 -0.46
CC003/UncJ m 216.6 15.877   3 9.1664 0.0733 198.8, 229.3 0.28
CC004/TauUncJ f 118.3 0.0   1   0.0 0.0 118.3, 118.3 -1.07
CC004/TauUncJ m 138.8 36.77   2   26.0 0.2649 112.8, 164.8 -1.08
CC005/TauUncJ f 199.3 33.61   3 19.404 0.1687 170.7, 236.3 0.12
CC005/TauUncJ m 171.0 38.467   2   27.2 0.225 143.8, 198.2 -0.52
CC006/TauUncJ f 122.3 33.8   2   23.9 0.2764 98.4, 146.2 -1.01
CC006/TauUncJ m 110.1 43.756   2   30.94 0.3976 79.12, 141.0 -1.58
CC007/UncJ f 94.12 0.0   1   0.0 0.0 94.12, 94.12 -1.42
CC008/GeniUncJ f 132.2 0.0   1   0.0 0.0 132.2, 132.2 -0.86
CC008/GeniUncJ m 353.3 0.0   1   0.0 0.0 353.3, 353.3 2.67
CC009/UncJ f 145.1 17.748   2   12.55 0.1224 132.5, 157.6 -0.68
CC009/UncJ m 126.9 7.4953   2   5.3 0.0591 121.6, 132.2 -1.29
CC011/UncJ f 185.0 19.64   3 11.339 0.1062 166.5, 205.6 -0.09
CC011/UncJ m 193.6 90.46   3 52.22 0.4672 115.9, 292.9 -0.12
CC012/GeniUncJ f 399.4 143.9   3 83.06 0.3601 313.1, 565.5 3.04
CC012/GeniUncJ m 384.8 0.0   1   0.0 0.0 384.8, 384.8 3.22
CC013/GeniUncJ f 145.0 22.486   2   15.9 0.1551 129.1, 160.9 -0.68
CC013/GeniUncJ m 178.7 108.1   2   76.45 0.6052 102.2, 255.1 -0.38
CC015/UncJ f 223.7 0.0   1   0.0 0.0 223.7, 223.7 0.47
CC015/UncJ m 292.9 0.0   1   0.0 0.0 292.9, 292.9 1.62
CC016/GeniUncJ f 304.1 117.3   3 67.72 0.3858 198.1, 430.1 1.65
CC016/GeniUncJ m 224.3 28.76   4 14.38 0.1282 197.6, 257.6 0.42
CC017/UncJ f 137.1 6.2933   2   4.45 0.0459 132.7, 141.6 -0.79
CC017/UncJ m 123.5 12.878   3 7.4354 0.1043 112.0, 137.4 -1.35
CC018/UncJ f 181.8 42.041   3 24.272 0.2312 150.9, 229.7 -0.14
CC018/UncJ m 178.7 6.9296   2   4.9 0.0388 173.8, 183.6 -0.38
CC019/TauUncJ f 195.4 71.79   4 35.896 0.3675 122.8, 282.6 0.06
CC019/TauUncJ m 213.5 101.4   4 50.7 0.475 98.25, 339.3 0.23
CC023/GeniUncJ f 177.2 73.54   2   52.0 0.415 125.2, 229.2 -0.21
CC023/GeniUncJ m 197.2 0.0   1   0.0 0.0 197.2, 197.2 -0.06
CC025/GeniUncJ f 220.0 98.98   3 57.14 0.4498 112.7, 307.7 0.42
CC025/GeniUncJ m 177.5 24.906   3 14.38 0.1403 161.2, 206.2 -0.4
CC026/GeniUncJ f 327.4 0.0   1   0.0 0.0 327.4, 327.4 1.99
CC026/GeniUncJ m 166.7 60.46   2   42.75 0.3628 123.9, 209.4 -0.59
CC027/GeniUncJ f 247.9 70.78   2   50.05 0.2855 197.9, 298.0 0.83
CC027/GeniUncJ m 210.4 26.12   4 13.06 0.1241 174.8, 236.0 0.17
CC028/GeniUncJ f 221.3 46.143   3 26.641 0.2085 193.6, 274.6 0.44
CC028/GeniUncJ m 201.3 7.4   3 4.2724 0.0368 193.9, 208.7 0.01
CC029/UncJ f 130.5 0.0   1   0.0 0.0 130.5, 130.5 -0.89
CC029/UncJ m 202.6 0.0   1   0.0 0.0 202.6, 202.6 0.04
CC030/GeniUncJ f 162.5 47.235   2   33.4 0.2907 129.1, 195.9 -0.42
CC030/GeniUncJ m 212.2 29.981   2   21.2 0.1413 191.0, 233.4 0.2
CC032/GeniUncJ f 187.4 18.455   2   13.05 0.0985 174.4, 200.5 -0.06
CC033/GeniUncJ f 157.6 35.426   2   25.05 0.2247 132.6, 182.7 -0.49
CC033/GeniUncJ m 154.2 17.324   2   12.25 0.1124 141.9, 166.4 -0.81
CC035/UncJ m 178.0 0.0   1   0.0 0.0 178.0, 178.0 -0.39
CC036/UncJ f 136.3 36.989   3 21.355 0.2713 94.65, 165.2 -0.81
CC036/UncJ m 153.2 7.7694   3 4.4857 0.0507 145.1, 160.6 -0.83
CC037/TauUncJ f 227.8 19.021   2   13.45 0.0835 214.3, 241.2 0.53
CC037/TauUncJ m 233.7 35.872   3 20.711 0.1535 206.2, 274.3 0.58
CC040/TauUncJ f 126.6 33.137   3 19.132 0.2617 89.74, 153.9 -0.95
CC040/TauUncJ m 236.5 166.9   3 96.39 0.7058 109.8, 425.7 0.63
CC041/TauUncJ f 338.6 99.89   3 57.67 0.295 278.1, 453.9 2.15
CC041/TauUncJ m 246.4 18.102   2   12.8 0.0735 233.6, 259.2 0.8
CC043/GeniUncJ f 215.2 75.17   2   53.15 0.3494 162.0, 268.3 0.35
CC043/GeniUncJ m 155.8 28.921   2   20.45 0.1857 135.3, 176.2 -0.78
CC044/UncJ f 122.2 0.0   1   0.0 0.0 122.2, 122.2 -1.01
CC051/TauUncJ f 306.5 0.0   1   0.0 0.0 306.5, 306.5 1.68
CC051/TauUncJ m 264.7 0.0   1   0.0 0.0 264.7, 264.7 1.12
CC057/UncJ f 223.6 87.33   2   61.75 0.3906 161.8, 285.3 0.47
CC057/UncJ m 247.1 22.274   2   15.75 0.0902 231.3, 262.8 0.82
CC059/TauUncJ f 284.1 112.3   4 56.17 0.3955 188.9, 446.5 1.35
CC059/TauUncJ m 247.0 26.788   5 11.98 0.1084 215.0, 271.0 0.81
CC060/UncJ f 109.5 0.0   1   0.0 0.0 109.5, 109.5 -1.2
CC060/UncJ m 101.7 0.0   1   0.0 0.0 101.7, 101.7 -1.73
CC061/GeniUncJ f 157.8 33.275   3 19.211 0.2108 121.8, 187.4 -0.49
CC061/GeniUncJ m 210.8 19.87   2   14.05 0.0943 196.7, 224.8 0.18
CC074/UncJ f 96.36 0.0   1   0.0 0.0 96.36, 96.36 -1.39
CC074/UncJ m 177.5 0.0   1   0.0 0.0 177.5, 177.5 -0.4
CC075/UncJ f 168.6 68.59   2   48.5 0.4068 120.1, 217.1 -0.33
CC075/UncJ m 173.9 0.0   1   0.0 0.0 173.9, 173.9 -0.46
CC078/TauUncJ f 179.3 14.121   3 8.1525 0.0788 163.0, 187.8 -0.18
CC078/TauUncJ m 241.3 16.215   3 9.3616 0.0672 229.1, 259.7 0.71
CC079/TauUncJ f 117.3 0.0   1   0.0 0.0 117.3, 117.3 -1.08
CC079/TauUncJ m 169.2 34.436   2   24.35 0.2035 144.9, 193.6 -0.55
CC080/TauUncJ f 135.2 28.001   2   19.8 0.2071 115.4, 155.0 -0.82
CC080/TauUncJ m 202.7 0.0   1   0.0 0.0 202.7, 202.7 0.04
CC084/TauJ f 299.1 108.2   2   76.5 0.3617 222.6, 375.6 1.57
CC084/TauJ m 253.4 60.03   2   42.45 0.237 210.9, 295.8 0.93
NOD/ShiLtJ f 119.9 34.203   8 12.093 0.2853 88.26, 194.7 -1.04
NOD/ShiLtJ m 149.2 64.07   11 19.318 0.4294 86.43, 304.6 -0.9
NZO/HlLtJ f 131.9 23.565   3 13.605 0.1787 108.8, 155.9 -0.87
NZO/HlLtJ m 125.5 45.92   2   32.47 0.3658 93.06, 158.0 -1.31
PWK/PhJ f 238.0 60.04   9 20.013 0.2523 141.2, 330.8 0.68
PWK/PhJ m 241.3 42.209   8 14.923 0.1749 164.2, 319.2 0.71
WSB/EiJ f 170.5 32.812   8 11.601 0.1925 134.9, 224.4 -0.31
WSB/EiJ m 177.8 29.503   6 12.045 0.1659 149.6, 225.7 -0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 175.5666666667 33.2695157411 241.1873427822 109.9459905511
129S1/SvImJ m 173.63 28.8122458034 230.4591725296 116.8008274704
A/J f 265.9166666667 23.5251001873 312.317491734 219.5158415993
A/J m 244.08 25.7704560804 294.9095571525 193.2504428475
C57BL/6J f 244.1285714286 15.4007931914 274.5050418828 213.7521009743
C57BL/6J m 253.7454545455 17.374437945 288.0147349867 219.4761741042
CAST/EiJ f 201.14 18.2224642487 237.0819245472 165.1980754528
CAST/EiJ m 255.9 20.3733343888 296.0842932649 215.7157067351
CC001/UncJ f 206.3 33.2695157411 271.9206761156 140.6793238844
CC001/UncJ m 126.85 40.7466687776 207.2185865298 46.4814134702
CC002/UncJ f 190.15 28.8122458034 246.9791725296 133.3208274704
CC002/UncJ m 154.005 28.8122458034 210.8341725296 97.1758274704
CC003/UncJ f 159.6 40.7466687776 239.9685865298 79.2314134702
CC003/UncJ m 216.6 33.2695157411 282.2206761156 150.9793238844
CC005/TauUncJ f 199.2666666667 33.2695157411 264.8873427822 133.6459905511
CC005/TauUncJ m 171.0 40.7466687776 251.3685865298 90.6314134702
CC006/TauUncJ f 122.3 40.7466687776 202.6685865298 41.9314134702
CC006/TauUncJ m 110.06 40.7466687776 190.4285865298 29.6914134702
CC009/UncJ f 145.05 40.7466687776 225.4185865298 64.6814134702
CC009/UncJ m 126.9 40.7466687776 207.2685865298 46.5314134702
CC011/UncJ f 184.9666666667 33.2695157411 250.5873427822 119.3459905511
CC011/UncJ m 193.6 33.2695157411 259.2206761156 127.9793238844
CC013/GeniUncJ f 145.0 40.7466687776 225.3685865298 64.6314134702
CC013/GeniUncJ m 178.65 40.7466687776 259.0185865298 98.2814134702
CC016/GeniUncJ f 304.0666666667 33.2695157411 369.6873427822 238.4459905511
CC016/GeniUncJ m 224.275 28.8122458034 281.1041725296 167.4458274704
CC017/UncJ f 137.15 40.7466687776 217.5185865298 56.7814134702
CC017/UncJ m 123.4666666667 33.2695157411 189.0873427822 57.8459905511
CC018/UncJ f 181.8333333333 33.2695157411 247.4540094489 116.2126572178
CC018/UncJ m 178.7 40.7466687776 259.0685865298 98.3314134702
CC019/TauUncJ f 195.35 28.8122458034 252.1791725296 138.5208274704
CC019/TauUncJ m 213.4625 28.8122458034 270.2916725296 156.6333274704
CC025/GeniUncJ f 220.0333333333 33.2695157411 285.6540094489 154.4126572178
CC025/GeniUncJ m 177.5333333333 33.2695157411 243.1540094489 111.9126572178
CC027/GeniUncJ f 247.95 40.7466687776 328.3185865298 167.5814134702
CC027/GeniUncJ m 210.45 28.8122458034 267.2791725296 153.6208274704
CC028/GeniUncJ f 221.3333333333 33.2695157411 286.9540094489 155.7126572178
CC028/GeniUncJ m 201.3 33.2695157411 266.9206761156 135.6793238844
CC030/GeniUncJ f 162.5 40.7466687776 242.8685865298 82.1314134702
CC030/GeniUncJ m 212.2 40.7466687776 292.5685865298 131.8314134702
CC033/GeniUncJ f 157.65 40.7466687776 238.0185865298 77.2814134702
CC033/GeniUncJ m 154.15 40.7466687776 234.5185865298 73.7814134702
CC036/UncJ f 136.35 33.2695157411 201.9706761156 70.7293238844
CC036/UncJ m 153.1666666667 33.2695157411 218.7873427822 87.5459905511
CC037/TauUncJ f 227.75 40.7466687776 308.1185865298 147.3814134702
CC037/TauUncJ m 233.7333333333 33.2695157411 299.3540094489 168.1126572178
CC040/TauUncJ f 126.6133333333 33.2695157411 192.2340094489 60.9926572178
CC040/TauUncJ m 236.5333333333 33.2695157411 302.1540094489 170.9126572178
CC041/TauUncJ f 338.6 33.2695157411 404.2206761156 272.9793238844
CC041/TauUncJ m 246.4 40.7466687776 326.7685865298 166.0314134702
CC043/GeniUncJ f 215.15 40.7466687776 295.5185865298 134.7814134702
CC043/GeniUncJ m 155.75 40.7466687776 236.1185865298 75.3814134702
CC057/UncJ f 223.55 40.7466687776 303.9185865298 143.1814134702
CC057/UncJ m 247.05 40.7466687776 327.4185865298 166.6814134702
CC059/TauUncJ f 284.05 28.8122458034 340.8791725296 227.2208274704
CC059/TauUncJ m 247.02 25.7704560804 297.8495571525 196.1904428475
CC061/GeniUncJ f 157.8333333333 33.2695157411 223.4540094489 92.2126572178
CC061/GeniUncJ m 210.75 40.7466687776 291.1185865298 130.3814134702
CC078/TauUncJ f 179.3 33.2695157411 244.9206761156 113.6793238844
CC078/TauUncJ m 241.3 33.2695157411 306.9206761156 175.6793238844
CC084/TauJ f 299.1 40.7466687776 379.4685865298 218.7314134702
CC084/TauJ m 253.35 40.7466687776 333.7185865298 172.9814134702
NOD/ShiLtJ f 119.89125 20.3733343888 160.0755432649 79.7069567351
NOD/ShiLtJ m 149.2181818182 17.374437945 183.4874622595 114.9489013769
NZO/HlLtJ f 131.8666666667 33.2695157411 197.4873427822 66.2459905511
NZO/HlLtJ m 125.53 40.7466687776 205.8985865298 45.1614134702
PWK/PhJ f 238.0111111111 19.2081638689 275.8972261308 200.1249960914
PWK/PhJ m 241.35 20.3733343888 281.5342932649 201.1657067351
WSB/EiJ f 170.45 20.3733343888 210.6342932649 130.2657067351
WSB/EiJ m 177.8333333333 23.5251001873 224.2341584007 131.432508266


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 174.5983333333 22.0057162226 218.0023307998 131.1943358669
A/J both 254.9983333333 17.4466812418 289.4101061998 220.5865604669
C57BL/6J both 248.937012987 11.6087846568 271.8341391125 226.0398868616
CAST/EiJ both 228.52 13.6668481865 255.4764434104 201.5635565896
CC001/UncJ both 166.575 26.3018615982 218.4526995314 114.6973004687
CC002/UncJ both 172.0775 20.3733343888 212.2617932649 131.8932067351
CC003/UncJ both 188.1 26.3018615982 239.9776995313 136.2223004687
CC005/TauUncJ both 185.1333333333 26.3018615982 237.0110328647 133.255633802
CC006/TauUncJ both 116.18 28.8122458034 173.0091725296 59.3508274704
CC009/UncJ both 135.975 28.8122458034 192.8041725296 79.1458274704
CC011/UncJ both 189.2833333333 23.5251001873 235.6841584007 142.882508266
CC013/GeniUncJ both 161.825 28.8122458034 218.6541725296 104.9958274704
CC016/GeniUncJ both 264.1708333333 22.0057162226 307.5748307998 220.7668358669
CC017/UncJ both 130.3083333333 26.3018615982 182.1860328647 78.430633802
CC018/UncJ both 180.2666666667 26.3018615982 232.144366198 128.3889671353
CC019/TauUncJ both 204.40625 20.3733343888 244.5905432649 164.2219567351
CC025/GeniUncJ both 198.7833333333 23.5251001873 245.1841584007 152.382508266
CC027/GeniUncJ both 229.2 24.9521368058 278.4155070867 179.9844929133
CC028/GeniUncJ both 211.3166666667 23.5251001873 257.717491734 164.9158415993
CC030/GeniUncJ both 187.35 28.8122458034 244.1791725296 130.5208274704
CC033/GeniUncJ both 155.9 28.8122458034 212.7291725296 99.0708274704
CC036/UncJ both 144.7583333333 23.5251001873 191.1591584007 98.357508266
CC037/TauUncJ both 230.7416666667 26.3018615982 282.619366198 178.8639671353
CC040/TauUncJ both 181.5733333333 23.5251001873 227.9741584007 135.172508266
CC041/TauUncJ both 292.5 26.3018615982 344.3776995313 240.6223004687
CC043/GeniUncJ both 185.45 28.8122458034 242.2791725296 128.6208274704
CC057/UncJ both 235.3 28.8122458034 292.1291725296 178.4708274704
CC059/TauUncJ both 265.535 19.3278420603 303.6571678644 227.4128321356
CC061/GeniUncJ both 184.2916666667 26.3018615982 236.169366198 132.4139671353
CC078/TauUncJ both 210.3 23.5251001873 256.7008250674 163.8991749326
CC084/TauJ both 276.225 28.8122458034 333.0541725296 219.3958274704
NOD/ShiLtJ both 134.5547159091 13.3879035702 160.9609699371 108.1484618811
NZO/HlLtJ both 128.6983333333 26.3018615982 180.5760328647 76.820633802
PWK/PhJ both 239.6805555556 14.0002349385 267.2945698259 212.0665412852
WSB/EiJ both 174.1416666667 15.5603911659 204.8329276058 143.4504057276




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA