Project measure / variable:   CSNA03   retrieval_cc_rev_JAX

ID, description, units MPD:110506   retrieval_cc_rev_JAX   retrieval (reversal learning assay), CC    reversal   informational
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - retrieval (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means11940.0   None 12912.0   None
Median of the strain means10922.0   None 11126.0   None
SD of the strain means± 5768.0 ± 6459.0
Coefficient of variation (CV)0.4831 0.5003
Min–max range of strain means2215.0   –   30178.0   None 5030.0   –   30679.0   None
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 24108910.7801 24108910.7801 0.2785 0.5983
strain 34 5191534361.8499 152692187.1132 1.764 0.0093
sex:strain 34 2489504405.5459 73220717.8102 0.8459 0.7124
Residuals 192 16620028103.1257 86562646.3704


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4468.0 1985.0   3 1146.0 0.4441 2843.0, 6680.0 -1.3
129S1/SvImJ m 6477.0 2000.0   4 999.9 0.3087 3716.0, 8041.0 -1.0
A/J f 15031.0 5630.0   6 2299.0 0.3746 9352.0, 24229.0 0.54
A/J m 13091.0 6242.0   5 2792.0 0.4768 7201.0, 20944.0 0.03
C57BL/6J f 15932.0 14334.0   14 3831.0 0.8997 6310.0, 63226.0 0.69
C57BL/6J m 16762.0 14006.0   11 4223.0 0.8356 3012.0, 48311.0 0.6
CAST/EiJ f 16539.0 6802.0   10 2151.0 0.4113 5147.0, 25185.0 0.8
CAST/EiJ m 20652.0 12225.0   8 4322.0 0.5919 6219.0, 42316.0 1.2
CC001/UncJ f 14686.0 8001.0   3 4619.0 0.5448 6415.0, 22387.0 0.48
CC001/UncJ m 8566.0 6423.0   2   4542.0 0.7497 4025.0, 13108.0 -0.67
CC002/UncJ f 10938.0 2545.0   4 1272.0 0.2326 8171.0, 13535.0 -0.17
CC002/UncJ m 10588.0 3257.0   4 1628.0 0.3076 5993.0, 13516.0 -0.36
CC003/UncJ f 30178.0 22956.0   2   16232.0 0.7607 13945.0, 46410.0 3.16
CC003/UncJ m 16711.0 11821.0   3 6825.0 0.7074 7937.0, 30153.0 0.59
CC004/TauUncJ f 7628.0 0.0   1   0.0 0.0 7628.0, 7628.0 -0.75
CC004/TauUncJ m 13750.0 8543.0   2   6040.0 0.6213 7710.0, 19791.0 0.13
CC005/TauUncJ f 10922.0 4209.0   3 2430.0 0.3854 6338.0, 14614.0 -0.18
CC005/TauUncJ m 7400.0 2474.0   2   1749.0 0.3344 5650.0, 9149.0 -0.85
CC006/TauUncJ f 3924.0 1087.0   2   768.5 0.277 3155.0, 4692.0 -1.39
CC006/TauUncJ m 7542.0 1844.0   2   1304.0 0.2445 6238.0, 8846.0 -0.83
CC007/UncJ f 6095.0 0.0   1   0.0 0.0 6095.0, 6095.0 -1.01
CC008/GeniUncJ f 2215.0 0.0   1   0.0 0.0 2215.0, 2215.0 -1.69
CC008/GeniUncJ m 14907.0 0.0   1   0.0 0.0 14907.0, 14907.0 0.31
CC009/UncJ f 9866.0 6290.0   2   4447.0 0.6375 5418.0, 14313.0 -0.36
CC009/UncJ m 5998.0 2525.0   2   1785.0 0.421 4213.0, 7784.0 -1.07
CC011/UncJ f 7572.0 7038.0   3 4064.0 0.9296 1015.0, 15009.0 -0.76
CC011/UncJ m 11451.0 2194.0   3 1267.0 0.1916 9749.0, 13928.0 -0.23
CC012/GeniUncJ f 21623.0 6931.0   3 4001.0 0.3205 14178.0, 27888.0 1.68
CC012/GeniUncJ m 12652.0 0.0   1   0.0 0.0 12652.0, 12652.0 -0.04
CC013/GeniUncJ f 5634.0 2.8284   2   2.0 0.0005 5632.0, 5636.0 -1.09
CC013/GeniUncJ m 7412.0 2171.0   2   1535.0 0.2929 5877.0, 8947.0 -0.85
CC015/UncJ f 9917.0 0.0   1   0.0 0.0 9917.0, 9917.0 -0.35
CC015/UncJ m 12235.0 0.0   1   0.0 0.0 12235.0, 12235.0 -0.1
CC016/GeniUncJ f 18616.0 5476.0   3 3161.0 0.2941 12819.0, 23701.0 1.16
CC016/GeniUncJ m 10208.0 6621.0   4 3311.0 0.6486 5629.0, 19995.0 -0.42
CC017/UncJ f 6943.0 929.1   2   657.0 0.1338 6286.0, 7600.0 -0.87
CC017/UncJ m 7427.0 3048.0   3 1760.0 0.4104 4290.0, 10378.0 -0.85
CC018/UncJ f 13737.0 4164.0   3 2404.0 0.3031 9953.0, 18198.0 0.31
CC018/UncJ m 7568.0 265.2   2   187.5 0.035 7380.0, 7755.0 -0.83
CC019/TauUncJ f 19226.0 22448.0   4 11224.0 1.1676 5708.0, 52596.0 1.26
CC019/TauUncJ m 15765.0 9593.0   4 4797.0 0.6085 5707.0, 28166.0 0.44
CC023/GeniUncJ f 8066.0 846.4   2   598.5 0.1049 7467.0, 8664.0 -0.67
CC023/GeniUncJ m 8619.0 0.0   1   0.0 0.0 8619.0, 8619.0 -0.66
CC025/GeniUncJ f 12806.0 12263.0   3 7080.0 0.9576 3787.0, 26770.0 0.15
CC025/GeniUncJ m 10960.0 1679.0   3 969.4 0.1532 9554.0, 12819.0 -0.3
CC026/GeniUncJ f 16935.0 0.0   1   0.0 0.0 16935.0, 16935.0 0.87
CC026/GeniUncJ m 14966.0 15162.0   2   10721.0 1.0132 4244.0, 25687.0 0.32
CC027/GeniUncJ f 9828.0 5312.0   2   3756.0 0.5405 6072.0, 13584.0 -0.37
CC027/GeniUncJ m 16412.0 8638.0   4 4319.0 0.5263 6634.0, 27587.0 0.54
CC028/GeniUncJ f 13055.0 8430.0   3 4867.0 0.6457 5162.0, 21935.0 0.19
CC028/GeniUncJ m 14478.0 7329.0   3 4231.0 0.5062 6071.0, 19518.0 0.24
CC029/UncJ f 8068.0 0.0   1   0.0 0.0 8068.0, 8068.0 -0.67
CC029/UncJ m 5030.0 0.0   1   0.0 0.0 5030.0, 5030.0 -1.22
CC030/GeniUncJ f 9349.0 5026.0   2   3554.0 0.5376 5795.0, 12903.0 -0.45
CC030/GeniUncJ m 15680.0 6227.0   2   4404.0 0.3972 11276.0, 20083.0 0.43
CC032/GeniUncJ f 16572.0 10589.0   2   7487.0 0.639 9084.0, 24059.0 0.8
CC033/GeniUncJ f 17004.0 10276.0   2   7266.0 0.6043 9738.0, 24270.0 0.88
CC033/GeniUncJ m 6043.0 76.37   2   54.0 0.0126 5989.0, 6097.0 -1.06
CC035/UncJ m 24847.0 0.0   1   0.0 0.0 24847.0, 24847.0 1.85
CC036/UncJ f 5386.0 1901.0   3 1097.0 0.3529 3754.0, 7473.0 -1.14
CC036/UncJ m 7252.0 932.8   3 538.6 0.1286 6610.0, 8322.0 -0.88
CC037/TauUncJ f 11579.0 5368.0   2   3796.0 0.4636 7783.0, 15375.0 -0.06
CC037/TauUncJ m 7457.0 4265.0   3 2462.0 0.5719 2625.0, 10696.0 -0.84
CC040/TauUncJ f 3536.0 1784.0   3 1030.0 0.5044 1560.0, 5027.0 -1.46
CC040/TauUncJ m 30679.0 28268.0   3 16321.0 0.9214 10480.0, 62984.0 2.75
CC041/TauUncJ f 19330.0 10053.0   3 5804.0 0.5201 11328.0, 30614.0 1.28
CC041/TauUncJ m 9772.0 3010.0   2   2128.0 0.308 7644.0, 11901.0 -0.49
CC043/GeniUncJ f 15771.0 17761.0   2   12559.0 1.1262 3212.0, 28330.0 0.66
CC043/GeniUncJ m 19904.0 668.2   2   472.5 0.0336 19432.0, 20377.0 1.08
CC044/UncJ f 7522.0 0.0   1   0.0 0.0 7522.0, 7522.0 -0.77
CC051/TauUncJ f 22737.0 0.0   1   0.0 0.0 22737.0, 22737.0 1.87
CC051/TauUncJ m 30592.0 0.0   1   0.0 0.0 30592.0, 30592.0 2.74
CC057/UncJ f 7592.0 2429.0   2   1717.0 0.32 5874.0, 9309.0 -0.75
CC057/UncJ m 11126.0 1924.0   2   1360.0 0.1729 9766.0, 12487.0 -0.28
CC059/TauUncJ f 19205.0 6212.0   4 3106.0 0.3235 10647.0, 24016.0 1.26
CC059/TauUncJ m 23195.0 7487.0   5 3348.0 0.3228 9988.0, 28640.0 1.59
CC060/UncJ f 14622.0 0.0   1   0.0 0.0 14622.0, 14622.0 0.47
CC060/UncJ m 7466.0 0.0   1   0.0 0.0 7466.0, 7466.0 -0.84
CC061/GeniUncJ f 12372.0 5585.0   3 3224.0 0.4514 7367.0, 18396.0 0.07
CC061/GeniUncJ m 26148.0 12587.0   2   8900.0 0.4814 17248.0, 35048.0 2.05
CC074/UncJ f 8195.0 0.0   1   0.0 0.0 8195.0, 8195.0 -0.65
CC074/UncJ m 6828.0 0.0   1   0.0 0.0 6828.0, 6828.0 -0.94
CC075/UncJ f 9310.0 647.7   2   458.0 0.0696 8852.0, 9768.0 -0.46
CC075/UncJ m 8922.0 0.0   1   0.0 0.0 8922.0, 8922.0 -0.62
CC078/TauUncJ f 10801.0 3804.0   3 2196.0 0.3522 6502.0, 13731.0 -0.2
CC078/TauUncJ m 15117.0 2954.0   3 1706.0 0.1954 12104.0, 18009.0 0.34
CC079/TauUncJ f 9239.0 0.0   1   0.0 0.0 9239.0, 9239.0 -0.47
CC079/TauUncJ m 6086.0 1582.0   2   1118.0 0.2599 4968.0, 7205.0 -1.06
CC080/TauUncJ f 7446.0 2660.0   2   1881.0 0.3573 5565.0, 9327.0 -0.78
CC080/TauUncJ m 20929.0 0.0   1   0.0 0.0 20929.0, 20929.0 1.24
CC084/TauJ f 20090.0 4948.0   2   3499.0 0.2463 16591.0, 23589.0 1.41
CC084/TauJ m 12736.0 3696.0   2   2614.0 0.2902 10122.0, 15349.0 -0.03
NOD/ShiLtJ f 5854.0 3094.0   8 1094.0 0.5286 3070.0, 12693.0 -1.05
NOD/ShiLtJ m 9398.0 7180.0   11 2165.0 0.764 2931.0, 28680.0 -0.54
NZO/HlLtJ f 6468.0 763.3   3 440.7 0.118 5643.0, 7149.0 -0.95
NZO/HlLtJ m 5948.0 876.8   2   620.0 0.1474 5328.0, 6568.0 -1.08
PWK/PhJ f 16844.0 12361.0   9 4120.0 0.7338 8827.0, 49213.0 0.85
PWK/PhJ m 18430.0 12597.0   8 4454.0 0.6835 7164.0, 39678.0 0.85
WSB/EiJ f 11645.0 3355.0   8 1186.0 0.2881 6332.0, 17327.0 -0.05
WSB/EiJ m 10490.0 4234.0   6 1729.0 0.4036 2980.0, 15817.0 -0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4468.3333333334 5371.6119979775 15063.2819908528 -6126.615324186
129S1/SvImJ m 6477.2500000001 4651.9524495218 15652.7446892037 -2698.2446892036
A/J f 15030.6666666666 3798.3032696729 22522.4267087219 7538.9066246113
A/J m 13090.9999999999 4160.8327620909 21297.811940899 4884.1880591008
C57BL/6J f 15931.8571428571 2486.5731779535 20836.3653544519 11027.3489312623
C57BL/6J m 16761.5454545455 2805.2328759342 22294.5769363613 11228.5139727296
CAST/EiJ f 16539.3 2942.1530614576 22342.3923753324 10736.2076246675
CAST/EiJ m 20652.375 3289.4271228142 27140.429515477 14164.320484523
CC001/UncJ f 14685.6666666667 5371.6119979775 25280.6153241862 4090.7180091473
CC001/UncJ m 8566.5000000001 6578.8542456284 21542.6090309542 -4409.609030954
CC002/UncJ f 10938.25 4651.9524495217 20113.7446892035 1762.7553107965
CC002/UncJ m 10587.7499999999 4651.9524495218 19763.2446892037 1412.2553107962
CC003/UncJ f 30177.4999999999 6578.8542456284 43153.6090309539 17201.3909690458
CC003/UncJ m 16710.6666666665 5371.6119979775 27305.6153241859 6115.7180091471
CC005/TauUncJ f 10921.6666666667 5371.6119979775 21516.6153241861 326.7180091473
CC005/TauUncJ m 7399.5 6578.8542456284 20375.6090309541 -5576.6090309541
CC006/TauUncJ f 3923.5 6578.8542456284 16899.609030954 -9052.6090309541
CC006/TauUncJ m 7542.0 6578.8542456284 20518.1090309541 -5434.1090309541
CC009/UncJ f 9865.5 6578.8542456284 22841.6090309542 -3110.6090309541
CC009/UncJ m 5998.5 6578.8542456284 18974.6090309541 -6977.609030954
CC011/UncJ f 7571.6666666667 5371.6119979774 18166.6153241861 -3023.2819908526
CC011/UncJ m 11451.3333333333 5371.6119979775 22046.2819908528 856.3846758139
CC013/GeniUncJ f 5634.0 6578.8542456284 18610.1090309541 -7342.1090309541
CC013/GeniUncJ m 7412.0 6578.8542456284 20388.1090309541 -5564.1090309541
CC016/GeniUncJ f 18616.0000000001 5371.6119979775 29210.9486575195 8021.0513424806
CC016/GeniUncJ m 10208.0000000001 4651.9524495218 19383.4946892037 1032.5053107964
CC017/UncJ f 6943.0 6578.8542456284 19919.1090309541 -6033.1090309541
CC017/UncJ m 7426.6666666667 5371.6119979775 18021.6153241861 -3168.2819908527
CC018/UncJ f 13737.0 5371.6119979775 24331.9486575194 3142.0513424806
CC018/UncJ m 7567.5 6578.8542456284 20543.6090309541 -5408.6090309541
CC019/TauUncJ f 19225.7500000001 4651.9524495218 28401.2446892038 10050.2553107964
CC019/TauUncJ m 15764.7500000001 4651.9524495218 24940.2446892037 6589.2553107965
CC025/GeniUncJ f 12806.3333333333 5371.6119979774 23401.2819908527 2211.3846758139
CC025/GeniUncJ m 10959.6666666666 5371.6119979775 21554.6153241861 364.7180091472
CC027/GeniUncJ f 9828.0 6578.8542456284 22804.1090309542 -3148.1090309541
CC027/GeniUncJ m 16411.75 4651.9524495218 25587.2446892037 7236.2553107964
CC028/GeniUncJ f 13055.0 5371.6119979775 23649.9486575194 2460.0513424806
CC028/GeniUncJ m 14478.3333333333 5371.6119979774 25073.2819908527 3883.384675814
CC030/GeniUncJ f 9349.0 6578.8542456284 22325.1090309541 -3627.1090309541
CC030/GeniUncJ m 15679.5 6578.8542456284 28655.6090309541 2703.3909690459
CC033/GeniUncJ f 17004.0 6578.8542456284 29980.1090309541 4027.8909690459
CC033/GeniUncJ m 6043.0 6578.8542456284 19019.1090309541 -6933.1090309541
CC036/UncJ f 5386.0 5371.6119979774 15980.9486575194 -5208.9486575193
CC036/UncJ m 7252.0 5371.6119979775 17846.9486575195 -3342.9486575194
CC037/TauUncJ f 11579.0 6578.8542456284 24555.1090309541 -1397.1090309541
CC037/TauUncJ m 7456.6666666667 5371.6119979775 18051.6153241861 -3138.2819908528
CC040/TauUncJ f 3535.6666666668 5371.6119979775 14130.6153241862 -7059.2819908526
CC040/TauUncJ m 30679.0 5371.6119979775 41273.9486575194 20084.0513424806
CC041/TauUncJ f 19330.0 5371.6119979775 29924.9486575194 8735.0513424806
CC041/TauUncJ m 9772.5 6578.8542456284 22748.6090309541 -3203.6090309541
CC043/GeniUncJ f 15771.0000000001 6578.8542456284 28747.1090309542 2794.8909690459
CC043/GeniUncJ m 19904.5000000001 6578.8542456284 32880.6090309542 6928.390969046
CC057/UncJ f 7591.5 6578.8542456285 20567.6090309541 -5384.6090309542
CC057/UncJ m 11126.5 6578.8542456284 24102.6090309541 -1849.609030954
CC059/TauUncJ f 19204.75 4651.9524495218 28380.2446892036 10029.2553107963
CC059/TauUncJ m 23194.8 4160.8327620909 31401.611940899 14987.9880591009
CC061/GeniUncJ f 12372.0 5371.6119979775 22966.9486575194 1777.0513424806
CC061/GeniUncJ m 26148.0 6578.8542456284 39124.1090309541 13171.8909690459
CC078/TauUncJ f 10800.6666666667 5371.6119979775 21395.6153241861 205.7180091473
CC078/TauUncJ m 15116.6666666667 5371.6119979775 25711.6153241861 4521.7180091473
CC084/TauJ f 20090.0000000001 6578.8542456284 33066.1090309542 7113.8909690459
CC084/TauJ m 12735.5000000001 6578.8542456284 25711.6090309541 -240.609030954
NOD/ShiLtJ f 5853.625 3289.4271228142 12341.6795154771 -634.429515477
NOD/ShiLtJ m 9398.0909090909 2805.2328759343 14931.1223909067 3865.0594272751
NZO/HlLtJ f 6467.9999999999 5371.6119979774 17062.9486575193 -4126.9486575194
NZO/HlLtJ m 5948.0 6578.8542456284 18924.1090309541 -7028.1090309541
PWK/PhJ f 16844.0 3101.3016330145 22960.9964594691 10727.0035405309
PWK/PhJ m 18430.375 3289.4271228142 24918.4295154771 11942.3204845229
WSB/EiJ f 11645.0 3289.4271228142 18133.0545154771 5156.945484523
WSB/EiJ m 10490.1666666667 3798.3032696729 17981.926708722 2998.4066246114


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 5472.7916666667 3552.9873715448 12480.6914919902 -1535.1081586568
A/J both 14060.8333333333 2816.8970962078 19616.8712822907 8504.7953843759
C57BL/6J both 16346.7012987013 1874.3250556894 20043.6134621279 12649.7891352747
CAST/EiJ both 18595.8375 2206.6147960932 22948.1567814993 14243.5182185007
CC001/UncJ both 11626.0833333334 4246.6321550742 20002.1256959096 3250.0409707572
CC002/UncJ both 10763.0 3289.4271228142 17251.054515477 4274.9454845229
CC003/UncJ both 23444.0833333332 4246.6321550741 31820.1256959093 15068.0409707571
CC005/TauUncJ both 9160.5833333334 4246.6321550742 17536.6256959095 784.5409707572
CC006/TauUncJ both 5732.75 4651.9524495218 14908.2446892036 -3442.7446892037
CC009/UncJ both 7932.0 4651.9524495218 17107.4946892037 -1243.4946892036
CC011/UncJ both 9511.5 3798.3032696729 17003.2600420553 2019.7399579448
CC013/GeniUncJ both 6523.0 4651.9524495218 15698.4946892037 -2652.4946892036
CC016/GeniUncJ both 14412.0000000001 3552.9873715448 21419.8998253236 7404.1001746765
CC017/UncJ both 7184.8333333333 4246.6321550741 15560.8756959095 -1191.2090292428
CC018/UncJ both 10652.25 4246.6321550741 19028.2923625762 2276.2076374239
CC019/TauUncJ both 17495.2500000001 3289.4271228142 23983.3045154772 11007.195484523
CC025/GeniUncJ both 11883.0 3798.3032696729 19374.7600420552 4391.2399579447
CC027/GeniUncJ both 13119.875 4028.7089984831 21066.0864931396 5173.6635068604
CC028/GeniUncJ both 13766.6666666667 3798.3032696729 21258.426708722 6274.9066246114
CC030/GeniUncJ both 12514.25 4651.9524495218 21689.7446892036 3338.7553107963
CC033/GeniUncJ both 11523.5 4651.9524495218 20698.9946892036 2348.0053107963
CC036/UncJ both 6319.0 3798.3032696729 13810.7600420553 -1172.7600420552
CC037/TauUncJ both 9517.8333333333 4246.6321550741 17893.8756959094 1141.7909707572
CC040/TauUncJ both 17107.3333333334 3798.3032696729 24599.0933753887 9615.5732912781
CC041/TauUncJ both 14551.25 4246.6321550741 22927.2923625762 6175.2076374239
CC043/GeniUncJ both 17837.7500000001 4651.9524495218 27013.2446892038 8662.2553107964
CC057/UncJ both 9359.0 4651.9524495218 18534.4946892037 183.5053107963
CC059/TauUncJ both 21199.775 3120.6245715682 27354.8839556742 15044.6660443257
CC061/GeniUncJ both 19260.0 4246.6321550741 27636.0423625762 10883.9576374239
CC078/TauUncJ both 12958.6666666667 3798.3032696729 20450.426708722 5466.9066246114
CC084/TauJ both 16412.7500000001 4651.9524495218 25588.2446892037 7237.2553107964
NOD/ShiLtJ both 7625.8579545455 2161.5771027498 11889.3450477172 3362.3708613737
NZO/HlLtJ both 6208.0 4246.6321550741 14584.0423625761 -2168.0423625762
PWK/PhJ both 17637.1875 2260.4425791891 22095.6765120129 13178.6984879871
WSB/EiJ both 11067.5833333333 2512.3414638895 16022.9168216956 6112.2498449711




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA