Project measure / variable:   CSNA03   trial_init_latency_cc_rev_JAX

ID, description, units MPD:110504   trial_init_latency_cc_rev_JAX   mean latency across trials between illumination of central hole and initiation of trial (reversal learning assay), CC   [centiseconds/n]  reversal  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

CSNA03 - mean latency across trials between illumination of central hole and initiation of trial (reversal learning assay), CC reversal

CC080/TauUncJCC051/TauUncJ129S1/SvImJCC025/GeniUncJCC026/GeniUncJCC041/TauUncJCC040/TauUncJCC043/GeniUncJA/JCC027/GeniUncJCC037/TauUncJCC002/UncJWSB/EiJCC013/GeniUncJCC059/TauUncJCC074/UncJCC012/GeniUncJCC057/UncJCC017/UncJCC075/UncJCC001/UncJNZO/HlLtJCC060/UncJPWK/PhJCC011/UncJC57BL/6JCC028/GeniUncJCC007/UncJCC035/UncJCC004/TauUncJCC044/UncJCC018/UncJCC008/GeniUncJCC084/TauJCC079/TauUncJCC023/GeniUncJNOD/ShiLtJCC078/TauUncJCC036/UncJCC009/UncJCC033/GeniUncJCC015/UncJCAST/EiJCC003/UncJCC016/GeniUncJCC061/GeniUncJCC019/TauUncJCC030/GeniUncJCC029/UncJCC032/GeniUncJCC006/TauUncJCC005/TauUncJ centiseconds/n 05001,0001,5002,0002,5003,000femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means523.7   centiseconds/n 549.0   centiseconds/n
Median of the strain means384.0   centiseconds/n 361.6   centiseconds/n
SD of the strain means± 370.7 ± 522.2
Coefficient of variation (CV)0.7078 0.9512
Min–max range of strain means157.2   –   1523.0   centiseconds/n 114.9   –   2946.0   centiseconds/n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1702.1999 1702.1999 0.0102 0.9199
strain 34 14436827.7776 424612.5817 2.5321 < 0.0001
sex:strain 34 5862700.9298 172432.3803 1.0283 0.4335
Residuals 192 32196573.8733 167690.4889


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 100 (100)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 1365.0 1287.0   3 743.3 0.9434 230.2, 2764.0 2.27
129S1/SvImJ m 915.5 643.7   4 321.8 0.7031 222.0, 1692.0 0.7
A/J f 502.3 237.6   6 97.01 0.4731 256.1, 895.3 -0.06
A/J m 852.4 883.9   5 395.3 1.0369 241.6, 2321.0 0.58
C57BL/6J f 439.8 193.8   14 51.8 0.4407 136.0, 771.2 -0.23
C57BL/6J m 443.3 221.5   11 66.8 0.4998 99.91, 703.8 -0.2
CAST/EiJ f 193.6 75.27   10 23.804 0.3888 97.54, 296.8 -0.89
CAST/EiJ m 316.7 211.5   8 74.77 0.6678 95.8, 792.0 -0.44
CC001/UncJ f 857.6 147.5   3 85.15 0.172 696.0, 985.0 0.9
CC001/UncJ m 207.8 90.44   2   63.95 0.4353 143.8, 271.7 -0.65
CC002/UncJ f 923.0 714.2   4 357.1 0.7738 289.0, 1939.0 1.08
CC002/UncJ m 350.0 214.6   4 107.3 0.6132 105.5, 624.2 -0.38
CC003/UncJ f 321.7 200.3   2   141.6 0.6225 180.1, 463.3 -0.54
CC003/UncJ m 183.8 69.87   3 40.34 0.3801 131.7, 263.2 -0.7
CC004/TauUncJ f 196.2 0.0   1   0.0 0.0 196.2, 196.2 -0.88
CC004/TauUncJ m 560.6 311.3   2   220.1 0.5552 340.5, 780.7 0.02
CC005/TauUncJ f 205.8 176.2   3 101.7 0.8559 57.17, 400.4 -0.86
CC005/TauUncJ m 117.5 134.9   2   95.39 1.1479 22.125, 212.9 -0.83
CC006/TauUncJ f 168.8 151.8   2   107.3 0.8994 61.43, 276.1 -0.96
CC006/TauUncJ m 155.4 97.87   2   69.21 0.6298 86.19, 224.6 -0.75
CC007/UncJ f 400.6 0.0   1   0.0 0.0 400.6, 400.6 -0.33
CC008/GeniUncJ f 384.0 0.0   1   0.0 0.0 384.0, 384.0 -0.38
CC008/GeniUncJ m 331.2 0.0   1   0.0 0.0 331.2, 331.2 -0.42
CC009/UncJ f 351.1 218.2   2   154.3 0.6215 196.8, 505.4 -0.47
CC009/UncJ m 190.2 40.305   2   28.5 0.2119 161.7, 218.7 -0.69
CC011/UncJ f 323.2 248.1   3 143.2 0.7675 75.66, 571.8 -0.54
CC011/UncJ m 563.1 373.9   3 215.9 0.664 160.6, 899.7 0.03
CC012/GeniUncJ f 378.8 162.6   3 93.87 0.4293 283.6, 566.5 -0.39
CC012/GeniUncJ m 760.4 0.0   1   0.0 0.0 760.4, 760.4 0.4
CC013/GeniUncJ f 416.6 94.12   2   66.55 0.2259 350.0, 483.1 -0.29
CC013/GeniUncJ m 821.5 354.2   2   250.5 0.4311 571.1, 1072.0 0.52
CC015/UncJ f 212.4 0.0   1   0.0 0.0 212.4, 212.4 -0.84
CC015/UncJ m 306.8 0.0   1   0.0 0.0 306.8, 306.8 -0.46
CC016/GeniUncJ f 327.8 408.4   3 235.8 1.2458 88.99, 799.4 -0.53
CC016/GeniUncJ m 174.4 66.97   4 33.487 0.3839 76.27, 218.2 -0.72
CC017/UncJ f 278.0 270.8   2   191.5 0.9738 86.59, 469.5 -0.66
CC017/UncJ m 801.8 879.5   3 507.8 1.097 173.8, 1807.0 0.48
CC018/UncJ f 435.4 153.5   3 88.62 0.3525 262.4, 555.2 -0.24
CC018/UncJ m 306.2 129.0   2   91.25 0.4214 215.0, 397.5 -0.46
CC019/TauUncJ f 206.6 146.5   4 73.24 0.7091 62.33, 357.3 -0.86
CC019/TauUncJ m 246.3 175.1   4 87.54 0.7108 73.92, 481.0 -0.58
CC023/GeniUncJ f 354.6 197.1   2   139.4 0.5557 215.3, 494.0 -0.46
CC023/GeniUncJ m 262.5 0.0   1   0.0 0.0 262.5, 262.5 -0.55
CC025/GeniUncJ f 1376.0 997.5   3 575.9 0.725 344.8, 2336.0 2.3
CC025/GeniUncJ m 887.8 402.9   3 232.6 0.4538 652.4, 1353.0 0.65
CC026/GeniUncJ f 1523.0 0.0   1   0.0 0.0 1523.0, 1523.0 2.7
CC026/GeniUncJ m 609.0 432.8   2   306.0 0.7108 302.9, 915.0 0.11
CC027/GeniUncJ f 948.5 566.4   2   400.5 0.5971 548.0, 1349.0 1.15
CC027/GeniUncJ m 368.4 110.5   4 55.25 0.2999 264.8, 482.3 -0.35
CC028/GeniUncJ f 555.3 495.8   3 286.2 0.8927 142.0, 1105.0 0.09
CC028/GeniUncJ m 247.0 145.2   3 83.81 0.5878 130.8, 409.7 -0.58
CC029/UncJ f 191.7 0.0   1   0.0 0.0 191.7, 191.7 -0.9
CC029/UncJ m 163.9 0.0   1   0.0 0.0 163.9, 163.9 -0.74
CC030/GeniUncJ f 175.0 3.3941   2   2.4 0.0194 172.6, 177.4 -0.94
CC030/GeniUncJ m 262.5 167.2   2   118.2 0.6368 144.3, 380.7 -0.55
CC032/GeniUncJ f 168.4 105.8   2   74.82 0.6283 93.57, 243.2 -0.96
CC033/GeniUncJ f 322.4 247.8   2   175.3 0.7686 147.2, 497.7 -0.54
CC033/GeniUncJ m 216.1 173.5   2   122.7 0.803 93.4, 338.8 -0.64
CC035/UncJ m 396.0 0.0   1   0.0 0.0 396.0, 396.0 -0.29
CC036/UncJ f 245.6 45.916   3 26.509 0.187 197.6, 289.1 -0.75
CC036/UncJ m 314.9 70.34   3 40.611 0.2234 262.0, 394.7 -0.45
CC037/TauUncJ f 838.0 470.9   2   333.0 0.562 505.0, 1171.0 0.85
CC037/TauUncJ m 450.9 147.0   3 84.84 0.3259 282.6, 553.8 -0.19
CC040/TauUncJ f 936.5 803.4   3 463.9 0.8579 112.8, 1718.0 1.11
CC040/TauUncJ m 962.6 519.8   3 300.1 0.54 444.4, 1484.0 0.79
CC041/TauUncJ f 634.6 333.2   3 192.4 0.525 389.5, 1014.0 0.3
CC041/TauUncJ m 1309.0 662.0   2   468.1 0.5058 840.8, 1777.0 1.46
CC043/GeniUncJ f 298.0 1.6971   2   1.2 0.0057 296.8, 299.2 -0.61
CC043/GeniUncJ m 1130.0 1334.0   2   943.5 1.1803 187.0, 2074.0 1.11
CC044/UncJ f 375.7 0.0   1   0.0 0.0 375.7, 375.7 -0.4
CC051/TauUncJ f 1471.0 0.0   1   0.0 0.0 1471.0, 1471.0 2.56
CC051/TauUncJ m 2269.0 0.0   1   0.0 0.0 2269.0, 2269.0 3.29
CC057/UncJ f 682.4 546.8   2   386.6 0.8014 295.7, 1069.0 0.43
CC057/UncJ m 447.5 116.1   2   82.1 0.2595 365.4, 529.6 -0.19
CC059/TauUncJ f 555.0 294.8   4 147.4 0.5312 280.1, 963.0 0.08
CC059/TauUncJ m 637.4 301.4   5 134.8 0.4728 241.9, 1031.0 0.17
CC060/UncJ f 842.2 0.0   1   0.0 0.0 842.2, 842.2 0.86
CC060/UncJ m 114.9 0.0   1   0.0 0.0 114.9, 114.9 -0.83
CC061/GeniUncJ f 211.9 136.9   3 79.01 0.6457 100.0, 364.5 -0.84
CC061/GeniUncJ m 266.0 129.1   2   91.3 0.4854 174.7, 357.3 -0.54
CC074/UncJ f 157.2 0.0   1   0.0 0.0 157.2, 157.2 -0.99
CC074/UncJ m 994.0 0.0   1   0.0 0.0 994.0, 994.0 0.85
CC075/UncJ f 925.8 950.7   2   672.2 1.027 253.5, 1598.0 1.08
CC075/UncJ m 150.3 0.0   1   0.0 0.0 150.3, 150.3 -0.76
CC078/TauUncJ f 204.3 115.4   3 66.65 0.565 71.42, 279.8 -0.86
CC078/TauUncJ m 361.6 340.3   3 196.5 0.9411 153.5, 754.3 -0.36
CC079/TauUncJ f 392.3 0.0   1   0.0 0.0 392.3, 392.3 -0.35
CC079/TauUncJ m 227.4 31.325   2   22.15 0.1377 205.3, 249.6 -0.62
CC080/TauUncJ f 1211.0 592.6   2   419.0 0.4894 791.9, 1630.0 1.85
CC080/TauUncJ m 2946.0 0.0   1   0.0 0.0 2946.0, 2946.0 4.59
CC084/TauJ f 447.6 159.7   2   113.0 0.3568 334.7, 560.6 -0.21
CC084/TauJ m 261.2 44.618   2   31.55 0.1708 229.7, 292.8 -0.55
NOD/ShiLtJ f 243.3 178.3   8 63.03 0.7328 49.208, 548.9 -0.76
NOD/ShiLtJ m 347.0 318.1   11 95.92 0.917 57.89, 1179.0 -0.39
NZO/HlLtJ f 533.6 539.6   3 311.6 1.0113 173.2, 1154.0 0.03
NZO/HlLtJ m 516.5 535.1   2   378.4 1.0358 138.2, 894.9 -0.06
PWK/PhJ f 279.5 147.1   9 49.032 0.5264 79.35, 497.6 -0.66
PWK/PhJ m 638.4 504.2   8 178.2 0.7897 63.46, 1388.0 0.17
WSB/EiJ f 720.4 750.7   8 265.4 1.0421 49.806, 2406.0 0.53
WSB/EiJ m 537.1 464.1   6 189.5 0.8642 150.6, 1416.0 -0.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1364.7333333333 236.4251036611 1831.0573782535 898.4092884132
129S1/SvImJ m 915.525 204.7501458629 1319.3734692964 511.6765307036
A/J f 502.2666666667 167.1777940415 832.00756106 172.5257722733
A/J m 852.44 183.134097821 1213.6530519824 491.2269480176
C57BL/6J f 439.7857142857 109.4435565301 655.6518011829 223.9196273886
C57BL/6J m 443.2554545455 123.4689835632 686.7852445119 199.725664579
CAST/EiJ f 193.594 129.4953624357 449.0101985098 -61.8221985098
CAST/EiJ m 316.7 144.7802165886 602.2639912113 31.1360087887
CC001/UncJ f 857.5666666667 236.4251036611 1323.8907115868 391.2426217465
CC001/UncJ m 207.75 289.5604331772 778.8779824225 -363.3779824225
CC002/UncJ f 922.975 204.7501458629 1326.8234692963 519.1265307036
CC002/UncJ m 350.025 204.7501458629 753.8734692964 -53.8234692964
CC003/UncJ f 321.7 289.5604331772 892.8279824225 -249.4279824225
CC003/UncJ m 183.8 236.4251036611 650.1240449201 -282.5240449201
CC005/TauUncJ f 205.8233333333 236.4251036611 672.1473782535 -260.5007115868
CC005/TauUncJ m 117.5125 289.5604331772 688.6404824225 -453.6154824225
CC006/TauUncJ f 168.765 289.5604331772 739.8929824225 -402.3629824225
CC006/TauUncJ m 155.395 289.5604331772 726.5229824225 -415.7329824225
CC009/UncJ f 351.1 289.5604331772 922.2279824225 -220.0279824225
CC009/UncJ m 190.2 289.5604331772 761.3279824225 -380.9279824225
CC011/UncJ f 323.22 236.4251036611 789.5440449201 -143.1040449201
CC011/UncJ m 563.1333333333 236.4251036611 1029.4573782535 96.8092884132
CC013/GeniUncJ f 416.55 289.5604331772 987.6779824225 -154.5779824225
CC013/GeniUncJ m 821.55 289.5604331772 1392.6779824225 250.4220175775
CC016/GeniUncJ f 327.8266666667 236.4251036611 794.1507115868 -138.4973782535
CC016/GeniUncJ m 174.4425 204.7501458629 578.2909692964 -229.4059692964
CC017/UncJ f 278.045 289.5604331772 849.1729824225 -293.0829824225
CC017/UncJ m 801.7666666667 236.4251036611 1268.0907115868 335.4426217465
CC018/UncJ f 435.4333333333 236.4251036611 901.7573782535 -30.8907115868
CC018/UncJ m 306.25 289.5604331772 877.3779824225 -264.8779824225
CC019/TauUncJ f 206.5825 204.7501458629 610.4309692964 -197.2659692964
CC019/TauUncJ m 246.305 204.7501458629 650.1534692964 -157.5434692964
CC025/GeniUncJ f 1375.9333333333 236.4251036611 1842.2573782535 909.6092884132
CC025/GeniUncJ m 887.8 236.4251036611 1354.1240449201 421.4759550798
CC027/GeniUncJ f 948.5 289.5604331772 1519.6279824225 377.3720175775
CC027/GeniUncJ m 368.375 204.7501458629 772.2234692964 -35.4734692964
CC028/GeniUncJ f 555.3333333333 236.4251036611 1021.6573782535 89.0092884132
CC028/GeniUncJ m 246.9666666667 236.4251036611 713.2907115868 -219.3573782535
CC030/GeniUncJ f 175.0 289.5604331772 746.1279824225 -396.1279824225
CC030/GeniUncJ m 262.5 289.5604331772 833.6279824225 -308.6279824225
CC033/GeniUncJ f 322.45 289.5604331772 893.5779824225 -248.6779824225
CC033/GeniUncJ m 216.1 289.5604331772 787.2279824225 -355.0279824225
CC036/UncJ f 245.6 236.4251036611 711.9240449201 -220.7240449201
CC036/UncJ m 314.8666666667 236.4251036611 781.1907115868 -151.4573782535
CC037/TauUncJ f 838.0 289.5604331772 1409.1279824225 266.8720175775
CC037/TauUncJ m 450.9 236.4251036611 917.2240449201 -15.4240449201
CC040/TauUncJ f 936.5 236.4251036611 1402.8240449201 470.1759550799
CC040/TauUncJ m 962.6333333333 236.4251036611 1428.9573782535 496.3092884132
CC041/TauUncJ f 634.6333333333 236.4251036611 1100.9573782535 168.3092884132
CC041/TauUncJ m 1308.9 289.5604331772 1880.0279824225 737.7720175775
CC043/GeniUncJ f 298.0 289.5604331772 869.1279824225 -273.1279824225
CC043/GeniUncJ m 1130.5 289.5604331772 1701.6279824225 559.3720175775
CC057/UncJ f 682.35 289.5604331772 1253.4779824225 111.2220175775
CC057/UncJ m 447.5 289.5604331772 1018.6279824225 -123.6279824225
CC059/TauUncJ f 555.0 204.7501458629 958.8484692964 151.1515307036
CC059/TauUncJ m 637.44 183.134097821 998.6530519824 276.2269480176
CC061/GeniUncJ f 211.9333333333 236.4251036611 678.2573782535 -254.3907115868
CC061/GeniUncJ m 266.0 289.5604331772 837.1279824225 -305.1279824225
CC078/TauUncJ f 204.3066666667 236.4251036611 670.6307115868 -262.0173782535
CC078/TauUncJ m 361.6 236.4251036611 827.9240449201 -104.7240449201
CC084/TauJ f 447.65 289.5604331772 1018.7779824225 -123.4779824225
CC084/TauJ m 261.25 289.5604331772 832.3779824225 -309.8779824225
NOD/ShiLtJ f 243.301 144.7802165886 528.8649912113 -42.2629912113
NOD/ShiLtJ m 346.9509090909 123.4689835632 590.4806990573 103.4211191245
NZO/HlLtJ f 533.6 236.4251036611 999.9240449202 67.2759550799
NZO/HlLtJ m 516.55 289.5604331772 1087.6779824225 -54.5779824225
PWK/PhJ f 279.4611111111 136.5000972419 548.6934239754 10.2287982469
PWK/PhJ m 638.3825 144.7802165886 923.9464912113 352.8185087887
WSB/EiJ f 720.40075 144.7802165886 1005.9647412113 434.8367587887
WSB/EiJ m 537.1 167.1777940415 866.8408943934 207.3591056066


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1140.1291666667 156.380506995 1448.5735299738 831.6848033596
A/J both 677.3533333333 123.9823703247 921.8957255467 432.81094112
C57BL/6J both 441.5205844156 82.4961847119 604.2357696883 278.8053991428
CAST/EiJ both 255.147 97.1215218268 446.7091488824 63.5848511176
CC001/UncJ both 532.6583333333 186.9104559027 901.3198607459 163.9968059207
CC002/UncJ both 636.5 144.7802165886 922.0639912113 350.9360087887
CC003/UncJ both 252.75 186.9104559026 621.4115274126 -115.9115274126
CC005/TauUncJ both 161.6679166667 186.9104559027 530.3294440793 -206.9936107459
CC006/TauUncJ both 162.08 204.7501458629 565.9284692964 -241.7684692964
CC009/UncJ both 270.65 204.7501458629 674.4984692964 -133.1984692964
CC011/UncJ both 443.1766666667 167.1777940415 772.91756106 113.4357722733
CC013/GeniUncJ both 619.05 204.7501458629 1022.8984692964 215.2015307036
CC016/GeniUncJ both 251.1345833333 156.380506995 559.5789466404 -57.3097799738
CC017/UncJ both 539.9058333333 186.9104559027 908.5673607459 171.2443059207
CC018/UncJ both 370.8416666667 186.9104559027 739.5031940792 2.1801392541
CC019/TauUncJ both 226.44375 144.7802165886 512.0077412113 -59.1202412113
CC025/GeniUncJ both 1131.8666666667 167.1777940415 1461.60756106 802.1257722733
CC027/GeniUncJ both 658.4375 177.3188277459 1008.1805336901 308.6944663099
CC028/GeniUncJ both 401.15 167.1777940415 730.8908943934 71.4091056066
CC030/GeniUncJ both 218.75 204.7501458629 622.5984692964 -185.0984692964
CC033/GeniUncJ both 269.275 204.7501458629 673.1234692964 -134.5734692964
CC036/UncJ both 280.2333333333 167.1777940415 609.9742277267 -49.50756106
CC037/TauUncJ both 644.45 186.9104559026 1013.1115274126 275.7884725874
CC040/TauUncJ both 949.5666666667 167.1777940415 1279.30756106 619.8257722733
CC041/TauUncJ both 971.7666666667 186.9104559027 1340.4281940792 603.1051392541
CC043/GeniUncJ both 714.25 204.7501458629 1118.0984692964 310.4015307036
CC057/UncJ both 564.925 204.7501458629 968.7734692964 161.0765307036
CC059/TauUncJ both 596.22 137.3505733657 867.1297889868 325.3102110132
CC061/GeniUncJ both 238.9666666667 186.9104559027 607.6281940792 -129.6948607459
CC078/TauUncJ both 282.9533333333 167.1777940415 612.6942277267 -46.78756106
CC084/TauJ both 354.45 204.7501458629 758.2984692964 -49.3984692964
NOD/ShiLtJ both 295.1259545455 95.1392414012 482.7782604716 107.4736486193
NZO/HlLtJ both 525.075 186.9104559027 893.7365274126 156.4134725874
PWK/PhJ both 458.9218055556 99.4906875824 655.1568886617 262.6867224494
WSB/EiJ both 628.750375 110.5777169416 846.8534759132 410.6472740868




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA