Project measure / variable:   CSNA03   latency_cc_rev_JAX

ID, description, units MPD:110502   latency_cc_rev_JAX   latency (reversal learning assay), CC    reversal   informational
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - latency (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means88504.0   None 117767.0   None
Median of the strain means58864.0   None 58692.0   None
SD of the strain means± 90405.0 ± 167525.0
Coefficient of variation (CV)1.0215 1.4225
Min–max range of strain means13876.0   –   568067.0   None 10916.0   –   880889.0   None
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 9413546247.9786 9413546247.9786 0.9765 0.3243
strain 34 441798609387.4887 12994076746.6908 1.348 0.1089
sex:strain 34 331062584778.1504 9737134846.4162 1.0101 0.4604
Residuals 192 1850844584467.803 9639815544.1031


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 142979.0 123846.0   3 71503.0 0.8662 8058.0, 251490.0 0.6
129S1/SvImJ m 124315.0 114513.0   4 57256.0 0.9211 21978.0, 268991.0 0.04
A/J f 93203.0 92265.0   6 37667.0 0.9899 25098.0, 273059.0 0.05
A/J m 174929.0 199949.0   5 89420.0 1.143 24524.0, 496646.0 0.34
C57BL/6J f 79053.0 75324.0   14 20131.0 0.9528 7750.0, 300482.0 -0.1
C57BL/6J m 94132.0 93387.0   11 28157.0 0.9921 15472.0, 281672.0 -0.14
CAST/EiJ f 32284.0 20087.0   10 6352.0 0.6222 4806.0, 65888.0 -0.62
CAST/EiJ m 66978.0 95400.0   8 33729.0 1.4244 8655.0, 274817.0 -0.3
CC001/UncJ f 168217.0 29140.0   3 16824.0 0.1732 140853.0, 198857.0 0.88
CC001/UncJ m 26927.0 11952.0   2   8451.0 0.4438 18476.0, 35378.0 -0.54
CC002/UncJ f 160773.0 147414.0   4 73707.0 0.9169 55772.0, 378175.0 0.8
CC002/UncJ m 48186.0 21622.0   4 10811.0 0.4487 19415.0, 70537.0 -0.42
CC003/UncJ f 119085.0 102205.0   2   72270.0 0.8583 46815.0, 191355.0 0.34
CC003/UncJ m 30242.0 14079.0   3 8129.0 0.4656 21606.0, 46489.0 -0.52
CC004/TauUncJ f 27076.0 0.0   1   0.0 0.0 27076.0, 27076.0 -0.68
CC004/TauUncJ m 209442.0 78075.0   2   55207.0 0.3728 154235.0, 264650.0 0.55
CC005/TauUncJ f 29205.0 37171.0   3 21461.0 1.2727 5946.0, 72075.0 -0.66
CC005/TauUncJ m 13662.0 16817.0   2   11892.0 1.231 1770.0, 25553.0 -0.62
CC006/TauUncJ f 19756.0 22032.0   2   15579.0 1.1152 4177.0, 35335.0 -0.76
CC006/TauUncJ m 19439.0 7135.0   2   5045.0 0.367 14394.0, 24484.0 -0.59
CC007/UncJ f 52082.0 0.0   1   0.0 0.0 52082.0, 52082.0 -0.4
CC008/GeniUncJ f 19966.0 0.0   1   0.0 0.0 19966.0, 19966.0 -0.76
CC008/GeniUncJ m 30472.0 0.0   1   0.0 0.0 30472.0, 30472.0 -0.52
CC009/UncJ f 57340.0 11041.0   2   7807.0 0.1925 49533.0, 65147.0 -0.34
CC009/UncJ m 25718.0 8470.0   2   5990.0 0.3294 19729.0, 31708.0 -0.55
CC011/UncJ f 33214.0 35123.0   3 20278.0 1.0575 4842.0, 72498.0 -0.61
CC011/UncJ m 164478.0 223873.0   3 129253.0 1.3611 28422.0, 422863.0 0.28
CC012/GeniUncJ f 58781.0 28591.0   3 16507.0 0.4864 37210.0, 91210.0 -0.33
CC012/GeniUncJ m 36498.0 0.0   1   0.0 0.0 36498.0, 36498.0 -0.49
CC013/GeniUncJ f 29990.0 6776.0   2   4792.0 0.226 25198.0, 34781.0 -0.65
CC013/GeniUncJ m 146808.0 74362.0   2   52582.0 0.5065 94226.0, 199390.0 0.17
CC015/UncJ f 24212.0 0.0   1   0.0 0.0 24212.0, 24212.0 -0.71
CC015/UncJ m 27608.0 0.0   1   0.0 0.0 27608.0, 27608.0 -0.54
CC016/GeniUncJ f 68760.0 97606.0   3 56353.0 1.4195 12267.0, 181465.0 -0.22
CC016/GeniUncJ m 18756.0 15789.0   4 7895.0 0.8418 2517.0, 36010.0 -0.59
CC017/UncJ f 52950.0 60555.0   2   42818.0 1.1436 10131.0, 95768.0 -0.39
CC017/UncJ m 262673.0 382376.0   3 220765.0 1.4557 11818.0, 702767.0 0.86
CC018/UncJ f 110337.0 47609.0   3 27487.0 0.4315 72429.0, 163771.0 0.24
CC018/UncJ m 31400.0 4.9497   2   3.5 0.0002 31397.0, 31404.0 -0.52
CC019/TauUncJ f 26783.0 16328.0   4 8164.0 0.6096 14384.0, 50017.0 -0.68
CC019/TauUncJ m 38108.0 36432.0   4 18216.0 0.956 6565.0, 85145.0 -0.48
CC023/GeniUncJ f 21451.0 1105.0   2   781.0 0.0515 20670.0, 22232.0 -0.74
CC023/GeniUncJ m 19426.0 0.0   1   0.0 0.0 19426.0, 19426.0 -0.59
CC025/GeniUncJ f 141234.0 111785.0   3 64539.0 0.7915 12414.0, 212705.0 0.58
CC025/GeniUncJ m 133724.0 105124.0   3 60693.0 0.7861 61325.0, 254303.0 0.1
CC026/GeniUncJ f 568067.0 0.0   1   0.0 0.0 568067.0, 568067.0 5.3
CC026/GeniUncJ m 149348.0 171799.0   2   121480.0 1.1503 27868.0, 270829.0 0.19
CC027/GeniUncJ f 232179.0 239995.0   2   169702.0 1.0337 62477.0, 401881.0 1.59
CC027/GeniUncJ m 78262.0 57508.0   4 28754.0 0.7348 20653.0, 156734.0 -0.24
CC028/GeniUncJ f 108825.0 165104.0   3 95323.0 1.5171 11929.0, 299462.0 0.22
CC028/GeniUncJ m 42199.0 35839.0   3 20692.0 0.8493 21039.0, 83579.0 -0.45
CC029/UncJ f 19360.0 0.0   1   0.0 0.0 19360.0, 19360.0 -0.76
CC029/UncJ m 16880.0 0.0   1   0.0 0.0 16880.0, 16880.0 -0.6
CC030/GeniUncJ f 14634.0 6395.0   2   4522.0 0.437 10112.0, 19156.0 -0.82
CC030/GeniUncJ m 40947.0 27696.0   2   19584.0 0.6764 21363.0, 60531.0 -0.46
CC032/GeniUncJ f 29335.0 12507.0   2   8844.0 0.4264 20491.0, 38179.0 -0.65
CC033/GeniUncJ f 68829.0 56109.0   2   39675.0 0.8152 29154.0, 108504.0 -0.22
CC033/GeniUncJ m 17358.0 11868.0   2   8392.0 0.6837 8966.0, 25750.0 -0.6
CC035/UncJ m 121562.0 0.0   1   0.0 0.0 121562.0, 121562.0 0.02
CC036/UncJ f 13876.0 5122.0   3 2957.0 0.3691 10408.0, 19759.0 -0.83
CC036/UncJ m 24537.0 6977.0   3 4028.0 0.2844 16503.0, 29080.0 -0.56
CC037/TauUncJ f 95936.0 29985.0   2   21202.0 0.3125 74734.0, 117139.0 0.08
CC037/TauUncJ m 62593.0 48473.0   3 27986.0 0.7744 9325.0, 104110.0 -0.33
CC040/TauUncJ f 127986.0 114145.0   3 65902.0 0.8919 2257.0, 225104.0 0.44
CC040/TauUncJ m 222011.0 130305.0   3 75231.0 0.5869 96874.0, 356932.0 0.62
CC041/TauUncJ f 80650.0 47788.0   3 27591.0 0.5925 29214.0, 123673.0 -0.09
CC041/TauUncJ m 166358.0 113979.0   2   80595.0 0.6851 85763.0, 246953.0 0.29
CC043/GeniUncJ f 46302.0 40296.0   2   28494.0 0.8703 17808.0, 74795.0 -0.47
CC043/GeniUncJ m 265972.0 330642.0   2   233799.0 1.2431 32172.0, 499771.0 0.88
CC044/UncJ f 75900.0 0.0   1   0.0 0.0 75900.0, 75900.0 -0.14
CC051/TauUncJ f 204506.0 0.0   1   0.0 0.0 204506.0, 204506.0 1.28
CC051/TauUncJ m 587544.0 0.0   1   0.0 0.0 587544.0, 587544.0 2.8
CC057/UncJ f 61959.0 52917.0   2   37418.0 0.8541 24541.0, 99377.0 -0.29
CC057/UncJ m 42683.0 34010.0   2   24049.0 0.7968 18634.0, 66732.0 -0.45
CC059/TauUncJ f 101831.0 64705.0   4 32352.0 0.6354 37534.0, 190672.0 0.15
CC059/TauUncJ m 163961.0 161295.0   5 72133.0 0.9837 31398.0, 423786.0 0.28
CC060/UncJ f 254355.0 0.0   1   0.0 0.0 254355.0, 254355.0 1.83
CC060/UncJ m 10916.0 0.0   1   0.0 0.0 10916.0, 10916.0 -0.64
CC061/GeniUncJ f 38052.0 32498.0   3 18763.0 0.8541 9202.0, 73259.0 -0.56
CC061/GeniUncJ m 81727.0 47133.0   2   33328.0 0.5767 48399.0, 115055.0 -0.22
CC074/UncJ f 21848.0 0.0   1   0.0 0.0 21848.0, 21848.0 -0.74
CC074/UncJ m 624249.0 0.0   1   0.0 0.0 624249.0, 624249.0 3.02
CC075/UncJ f 138056.0 125695.0   2   88880.0 0.9105 49176.0, 226935.0 0.55
CC075/UncJ m 13831.0 0.0   1   0.0 0.0 13831.0, 13831.0 -0.62
CC078/TauUncJ f 26509.0 18012.0   3 10399.0 0.6795 9356.0, 45272.0 -0.69
CC078/TauUncJ m 58692.0 64140.0   3 37031.0 1.0928 21024.0, 132751.0 -0.35
CC079/TauUncJ f 54922.0 0.0   1   0.0 0.0 54922.0, 54922.0 -0.37
CC079/TauUncJ m 22988.0 16272.0   2   11506.0 0.7078 11482.0, 34494.0 -0.57
CC080/TauUncJ f 166892.0 96026.0   2   67900.0 0.5754 98991.0, 234792.0 0.87
CC080/TauUncJ m 880889.0 0.0   1   0.0 0.0 880889.0, 880889.0 4.56
CC084/TauJ f 139492.0 138104.0   2   97654.0 0.9901 41837.0, 237146.0 0.56
CC084/TauJ m 20846.0 4472.0   2   3162.0 0.2145 17684.0, 24008.0 -0.58
NOD/ShiLtJ f 25462.0 18917.0   8 6688.0 0.743 2608.0, 60379.0 -0.7
NOD/ShiLtJ m 48532.0 47515.0   11 14326.0 0.979 4638.0, 140286.0 -0.41
NZO/HlLtJ f 58864.0 61039.0   3 35241.0 1.0369 20788.0, 129267.0 -0.33
NZO/HlLtJ m 63803.0 73037.0   2   51645.0 1.1447 12158.0, 115448.0 -0.32
PWK/PhJ f 53977.0 63799.0   9 21266.0 1.182 12379.0, 220455.0 -0.38
PWK/PhJ m 92160.0 65021.0   8 22989.0 0.7055 4252.0, 189222.0 -0.15
WSB/EiJ f 116362.0 118087.0   8 41750.0 1.0148 8716.0, 363368.0 0.31
WSB/EiJ m 105810.0 150269.0   6 61347.0 1.4202 7379.0, 402195.0 -0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 142978.6666666654 56685.7287863037 254785.3992324373 31171.9341008935
129S1/SvImJ m 124315.2500000012 49091.2811609737 221142.7207160924 27487.77928391
A/J f 93203.1666666666 40082.8632212967 172262.4654462346 14143.8678870986
A/J m 174929.3999999992 43908.5767113971 261534.5226442198 88324.2773557786
C57BL/6J f 79052.5714285716 26240.3935403077 130809.0315782144 27296.1112789287
C57BL/6J m 94132.1818181816 29603.1563797805 152521.343593527 35743.0200428361
CAST/EiJ f 32283.6 31048.0523448785 93522.6695072208 -28955.4695072207
CAST/EiJ m 66977.875 34712.77780606 135445.23614849 -1489.48614849
CC001/UncJ f 168217.333333334 56685.728786304 280024.0658991065 56410.6007675614
CC001/UncJ m 26927.0000000005 69425.55561212 163861.7222969807 -110007.7222969797
CC002/UncJ f 160772.7499999967 49091.2811609731 257600.2207160867 63945.2792839067
CC002/UncJ m 48185.9999999992 49091.2811609743 145013.4707160915 -48641.470716093
CC003/UncJ f 119084.9999999997 69425.5556121198 256019.7222969793 -17849.72229698
CC003/UncJ m 30242.3333333328 56685.7287863037 142049.0658991048 -81564.3992324392
CC005/TauUncJ f 29205.3333333335 56685.7287863039 141012.0658991058 -82601.3992324389
CC005/TauUncJ m 13661.5000000002 69425.5556121201 150596.2222969804 -123273.22229698
CC006/TauUncJ f 19755.9999999994 69425.5556121198 156690.7222969792 -117178.7222969804
CC006/TauUncJ m 19439.0000000003 69425.5556121201 156373.7222969806 -117495.72229698
CC009/UncJ f 57340.0 69425.5556121203 194274.7222969807 -79594.7222969806
CC009/UncJ m 25718.5000000002 69425.5556121199 162653.2222969801 -111216.2222969798
CC011/UncJ f 33214.0000000004 56685.7287863034 145020.7325657718 -78592.732565771
CC011/UncJ m 164478.0000000001 56685.7287863039 276284.7325657724 52671.2674342279
CC013/GeniUncJ f 29989.5000000002 69425.55561212 166924.2222969803 -106945.2222969798
CC013/GeniUncJ m 146807.9999999998 69425.55561212 283742.72229698 9873.2777030197
CC016/GeniUncJ f 68759.6666666666 56685.7287863039 180566.3992324389 -43047.0658991056
CC016/GeniUncJ m 18755.5000000002 49091.2811609739 115582.9707160917 -78071.9707160912
CC017/UncJ f 52949.4999999999 69425.5556121201 189884.2222969802 -83985.2222969804
CC017/UncJ m 262672.6666666664 56685.7287863037 374479.3992324383 150865.9341008945
CC018/UncJ f 110337.3333333328 56685.7287863037 222144.0658991048 -1469.3992324391
CC018/UncJ m 31400.5000000001 69425.5556121202 168335.2222969805 -105534.2222969803
CC019/TauUncJ f 26783.0000000002 49091.2811609741 123610.4707160922 -70044.4707160918
CC019/TauUncJ m 38107.9999999996 49091.2811609737 134935.4707160908 -58719.4707160915
CC025/GeniUncJ f 141234.3333333331 56685.7287863035 253041.0658991045 29427.6007675616
CC025/GeniUncJ m 133724.3333333326 56685.7287863039 245531.0658991049 21917.6007675603
CC027/GeniUncJ f 232179.0000000002 69425.5556121203 369113.7222969808 95244.2777030196
CC027/GeniUncJ m 78261.5000000008 49091.2811609738 175088.9707160921 -18565.9707160906
CC028/GeniUncJ f 108825.3333333336 56685.7287863038 220632.0658991057 -2981.3992324386
CC028/GeniUncJ m 42198.6666666672 56685.7287863036 154005.3992324389 -69608.0658991046
CC030/GeniUncJ f 14633.9999999997 69425.5556121201 151568.7222969801 -122300.7222969807
CC030/GeniUncJ m 40946.9999999996 69425.5556121201 177881.7222969799 -95987.7222969807
CC033/GeniUncJ f 68829.0 69425.55561212 205763.72229698 -68105.7222969801
CC033/GeniUncJ m 17357.9999999999 69425.5556121201 154292.7222969802 -119576.7222969803
CC036/UncJ f 13876.0000000003 56685.7287863036 125682.7325657721 -97930.7325657714
CC036/UncJ m 24536.6666666667 56685.7287863038 136343.3992324389 -87270.0658991054
CC037/TauUncJ f 95936.5000000001 69425.5556121198 232871.2222969798 -40998.2222969797
CC037/TauUncJ m 62593.333333333 56685.7287863038 174400.0658991051 -49213.3992324391
CC040/TauUncJ f 127986.3333333339 56685.7287863036 239793.0658991057 16179.600767562
CC040/TauUncJ m 222011.3333333335 56685.7287863038 333818.0658991057 110204.6007675612
CC041/TauUncJ f 80650.3333333334 56685.7287863038 192457.0658991055 -31156.3992324387
CC041/TauUncJ m 166357.9999999998 69425.55561212 303292.7222969799 29423.2777030197
CC043/GeniUncJ f 46301.5000000003 69425.5556121203 183236.222296981 -90633.2222969805
CC043/GeniUncJ m 265971.4999999996 69425.5556121199 402906.2222969794 129036.7777030198
CC057/UncJ f 61959.0000000001 69425.5556121204 198893.7222969809 -74975.7222969808
CC057/UncJ m 42683.0 69425.5556121199 179617.7222969799 -94251.7222969799
CC059/TauUncJ f 101831.25 49091.2811609738 198658.7207160913 5003.7792839086
CC059/TauUncJ m 163960.5999999997 43908.5767113969 250565.72264422 77355.4773557795
CC061/GeniUncJ f 38051.6666666667 56685.7287863037 149858.3992324387 -73755.0658991052
CC061/GeniUncJ m 81726.9999999999 69425.55561212 218661.7222969801 -55207.7222969802
CC078/TauUncJ f 26508.6666666666 56685.7287863036 138315.3992324384 -85298.0658991052
CC078/TauUncJ m 58692.3333333334 56685.7287863038 170499.0658991055 -53114.3992324388
CC084/TauJ f 139491.5000000002 69425.5556121202 276426.2222969807 2556.7777030198
CC084/TauJ m 20846.0000000003 69425.55561212 157780.7222969803 -116088.7222969797
NOD/ShiLtJ f 25461.6250000001 34712.7778060601 93928.9861484903 -43005.7361484901
NOD/ShiLtJ m 48532.3636363637 29603.1563797805 106921.5254117092 -9856.7981389819
NZO/HlLtJ f 58864.000000003 56685.7287863036 170670.7325657747 -52942.7325657686
NZO/HlLtJ m 63802.9999999981 69425.55561212 200737.7222969782 -73131.722296982
PWK/PhJ f 53976.8888888889 32727.5207739826 118528.5360329499 -10574.7582551721
PWK/PhJ m 92159.4999999999 34712.77780606 160626.86114849 23692.1388515097
WSB/EiJ f 116362.5 34712.7778060601 184829.8611484902 47895.1388515099
WSB/EiJ m 105809.5 40082.8632212968 184868.7987795681 26750.2012204318


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 133646.9583333333 37494.0853137537 207600.1606512681 59693.7560153985
A/J both 134066.2833333329 29726.2469580243 192698.2285333205 75434.3381333453
C57BL/6J both 86592.3766233766 19779.4408464696 125605.2763491373 47579.4768976159
CAST/EiJ both 49630.7375 23286.0392586588 95560.0396304154 3701.4353695846
CC001/UncJ both 97572.1666666672 44814.0034478231 185963.1498289579 9181.1835043766
CC002/UncJ both 104479.3749999979 34712.7778060598 172946.7361484876 36012.0138515083
CC003/UncJ both 74663.6666666662 44814.0034478228 163054.6498289561 -13727.3164956237
CC005/TauUncJ both 21433.4166666668 44814.0034478231 109824.3998289574 -66957.5664956237
CC006/TauUncJ both 19597.4999999999 49091.2811609738 116424.9707160913 -77229.9707160915
CC009/UncJ both 41529.2500000001 49091.2811609739 138356.7207160917 -55298.2207160915
CC011/UncJ both 98846.0000000003 40082.8632212967 177905.2987795681 19786.7012204324
CC013/GeniUncJ both 88398.75 49091.2811609738 185226.2207160915 -8428.7207160914
CC016/GeniUncJ both 43757.5833333334 37494.0853137539 117710.7856512685 -30195.6189846017
CC017/UncJ both 157811.0833333331 44814.003447823 246202.0664956235 69420.1001710428
CC018/UncJ both 70868.9166666665 44814.003447823 159259.8998289569 -17522.0664956239
CC019/TauUncJ both 32445.4999999999 34712.7778060601 100912.8611484902 -36021.8611484904
CC025/GeniUncJ both 137479.3333333328 40082.8632212968 216538.6321129009 58420.0345537647
CC027/GeniUncJ both 155220.2500000005 42514.2965897279 239075.2994243297 71365.2005756712
CC028/GeniUncJ both 75512.0000000004 40082.8632212968 154571.2987795685 -3547.2987795678
CC030/GeniUncJ both 27790.4999999997 49091.281160974 124617.9707160913 -69036.970716092
CC033/GeniUncJ both 43093.5 49091.2811609738 139920.9707160913 -53733.9707160914
CC036/UncJ both 19206.3333333335 40082.8632212968 98265.6321129017 -59852.9654462346
CC037/TauUncJ both 79264.9166666665 44814.0034478228 167655.8998289565 -9126.0664956235
CC040/TauUncJ both 174998.8333333337 40082.8632212969 254058.132112902 95939.5345537653
CC041/TauUncJ both 123504.1666666666 44814.003447823 211895.1498289569 35113.1835043763
CC043/GeniUncJ both 156136.4999999999 49091.281160974 252963.9707160916 59309.0292839083
CC057/UncJ both 52321.0 49091.281160974 149148.4707160917 -44506.4707160916
CC059/TauUncJ both 132895.9249999998 32931.4325335477 197849.766983165 67942.0830168347
CC061/GeniUncJ both 59889.3333333333 44814.003447823 148280.3164956236 -28501.649828957
CC078/TauUncJ both 42600.5 40082.8632212968 121659.7987795681 -36458.7987795681
CC084/TauJ both 80168.7500000003 49091.2811609739 176996.2207160918 -16658.7207160913
NOD/ShiLtJ both 36996.9943181819 22810.76396495 81988.8651268771 -7994.8764905133
NZO/HlLtJ both 61333.5000000006 44814.003447823 149724.4831622909 -27057.4831622898
PWK/PhJ both 73068.1944444444 23854.0749088304 120117.8880982004 26018.5007906884
WSB/EiJ both 111086.0 26512.3219797422 163378.8108494725 58793.1891505275




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA