Project measure / variable:   CSNA03   total_time_cc_rev_JAX

ID, description, units MPD:110500   total_time_cc_rev_JAX   total time for all trials (reversal learning assay), CC   [min]  reversal  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - total time for all trials (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means263.8   min 337.6   min
Median of the strain means207.5   min 188.2   min
SD of the strain means± 240.7 ± 411.2
Coefficient of variation (CV)0.9125 1.2182
Min–max range of strain means60.0   –   1585.0   min 52.56   –   2034.0   min
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 72004.2416 72004.2416 1.0964 0.2964
strain 34 2646763.5773 77845.9876 1.1853 0.2363
sex:strain 34 2154001.8908 63352.9968 0.9647 0.5296
Residuals 192 12609306.2379 65673.47


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 302.8 239.7   3 138.4 0.7918 28.168, 470.4 0.16
129S1/SvImJ m 309.5 265.2   4 132.6 0.8567 81.27, 636.4 -0.07
A/J f 340.2 316.1   6 129.0 0.929 111.0, 949.7 0.32
A/J m 514.2 489.8   5 219.0 0.9524 94.58, 1140.0 0.43
C57BL/6J f 230.5 219.0   14 58.53 0.9502 41.678, 897.7 -0.14
C57BL/6J m 293.8 258.0   11 77.8 0.8782 60.0, 812.8 -0.11
CAST/EiJ f 133.9 69.93   10 22.113 0.5222 29.03, 258.8 -0.54
CAST/EiJ m 238.0 291.9   8 103.2 1.2264 46.995, 876.0 -0.24
CC001/UncJ f 396.3 62.93   3 36.335 0.1588 325.1, 444.4 0.55
CC001/UncJ m 97.0 52.33   2   37.0 0.5394 60.0, 134.0 -0.59
CC002/UncJ f 421.1 301.6   4 150.8 0.7162 194.3, 865.3 0.65
CC002/UncJ m 175.6 55.38   4 27.689 0.3154 94.82, 220.7 -0.39
CC003/UncJ f 427.5 275.4   2   194.8 0.6442 232.8, 622.3 0.68
CC003/UncJ m 140.6 69.92   3 40.368 0.4973 87.07, 219.7 -0.48
CC004/TauUncJ f 100.6 0.0   1   0.0 0.0 100.6, 100.6 -0.68
CC004/TauUncJ m 738.3 40.941   2   28.95 0.0554 709.4, 767.3 0.97
CC005/TauUncJ f 101.9 86.01   3 49.658 0.844 50.53, 201.2 -0.67
CC005/TauUncJ m 65.73 51.72   2   36.568 0.7868 29.163, 102.3 -0.66
CC006/TauUncJ f 83.62 78.61   2   55.58 0.9401 28.032, 139.2 -0.75
CC006/TauUncJ m 86.48 9.8854   2   6.99 0.1143 79.49, 93.47 -0.61
CC007/UncJ f 146.8 0.0   1   0.0 0.0 146.8, 146.8 -0.49
CC008/GeniUncJ f 60.0 0.0   1   0.0 0.0 60.0, 60.0 -0.85
CC008/GeniUncJ m 107.8 0.0   1   0.0 0.0 107.8, 107.8 -0.56
CC009/UncJ f 196.9 37.406   2   26.45 0.1899 170.5, 223.4 -0.28
CC009/UncJ m 101.6 18.972   2   13.415 0.1868 88.17, 115.0 -0.57
CC011/UncJ f 108.9 109.9   3 63.43 1.009 31.952, 234.7 -0.64
CC011/UncJ m 437.2 545.6   3 315.0 1.2479 108.5, 1067.0 0.24
CC012/GeniUncJ f 207.5 66.56   3 38.427 0.3208 159.1, 283.4 -0.23
CC012/GeniUncJ m 106.2 0.0   1   0.0 0.0 106.2, 106.2 -0.56
CC013/GeniUncJ f 94.71 22.048   2   15.59 0.2328 79.12, 110.3 -0.7
CC013/GeniUncJ m 530.3 341.7   2   241.6 0.6443 288.7, 771.9 0.47
CC015/UncJ f 95.37 0.0   1   0.0 0.0 95.37, 95.37 -0.7
CC015/UncJ m 118.4 0.0   1   0.0 0.0 118.4, 118.4 -0.53
CC016/GeniUncJ f 277.6 317.5   3 183.3 1.1438 92.59, 644.2 0.06
CC016/GeniUncJ m 83.61 63.02   4 31.511 0.7538 23.992, 161.6 -0.62
CC017/UncJ f 173.5 161.5   2   114.2 0.9308 59.31, 287.7 -0.38
CC017/UncJ m 625.0 860.9   3 497.1 1.3775 51.89, 1615.0 0.7
CC018/UncJ f 330.2 123.6   3 71.35 0.3743 255.0, 472.8 0.28
CC018/UncJ m 100.8 14.078   2   9.955 0.1396 90.89, 110.8 -0.58
CC019/TauUncJ f 124.2 76.13   4 38.066 0.6127 58.85, 226.4 -0.58
CC019/TauUncJ m 144.1 112.0   4 55.99 0.7771 30.545, 274.5 -0.47
CC023/GeniUncJ f 87.84 1.895   2   1.34 0.0216 86.5, 89.18 -0.73
CC023/GeniUncJ m 87.27 0.0   1   0.0 0.0 87.27, 87.27 -0.61
CC025/GeniUncJ f 312.0 231.5   3 133.6 0.7418 47.733, 478.6 0.2
CC025/GeniUncJ m 315.6 238.4   3 137.6 0.7553 152.8, 589.2 -0.05
CC026/GeniUncJ f 1585.0 0.0   1   0.0 0.0 1585.0, 1585.0 5.49
CC026/GeniUncJ m 437.1 463.7   2   327.9 1.0609 109.2, 765.0 0.24
CC027/GeniUncJ f 702.7 766.9   2   542.3 1.0914 160.4, 1245.0 1.82
CC027/GeniUncJ m 243.9 165.5   4 82.74 0.6784 77.52, 472.9 -0.23
CC028/GeniUncJ f 305.2 396.6   3 229.0 1.2993 53.04, 762.4 0.17
CC028/GeniUncJ m 157.0 111.0   3 64.09 0.7071 75.87, 283.5 -0.44
CC029/UncJ f 80.06 0.0   1   0.0 0.0 80.06, 80.06 -0.76
CC029/UncJ m 60.0 0.0   1   0.0 0.0 60.0, 60.0 -0.68
CC030/GeniUncJ f 63.9 27.107   2   19.168 0.4242 44.735, 83.07 -0.83
CC030/GeniUncJ m 165.0 97.34   2   68.83 0.59 96.14, 233.8 -0.42
CC032/GeniUncJ f 135.6 25.032   2   17.7 0.1846 117.9, 153.3 -0.53
CC033/GeniUncJ f 231.0 167.4   2   118.4 0.7244 112.7, 349.4 -0.14
CC033/GeniUncJ m 63.56 28.897   2   20.433 0.4547 43.123, 83.99 -0.67
CC035/UncJ m 354.4 0.0   1   0.0 0.0 354.4, 354.4 0.04
CC036/UncJ f 64.23 25.558   3 14.756 0.3979 47.447, 93.64 -0.83
CC036/UncJ m 112.5 1.4   3 0.80829 0.0124 110.9, 113.5 -0.55
CC037/TauUncJ f 244.0 36.062   2   25.5 0.1478 218.5, 269.5 -0.08
CC037/TauUncJ m 200.0 154.9   3 89.42 0.7744 37.625, 346.1 -0.33
CC040/TauUncJ f 295.9 257.7   3 148.8 0.8709 12.172, 515.4 0.13
CC040/TauUncJ m 570.9 289.3   3 167.0 0.5067 319.0, 886.9 0.57
CC041/TauUncJ f 244.3 116.9   3 67.49 0.4785 116.4, 345.6 -0.08
CC041/TauUncJ m 369.0 229.2   2   162.1 0.6213 206.9, 531.1 0.08
CC043/GeniUncJ f 158.0 152.9   2   108.1 0.9679 49.855, 266.1 -0.44
CC043/GeniUncJ m 587.0 644.8   2   455.9 1.0984 131.1, 1043.0 0.61
CC044/UncJ f 209.4 0.0   1   0.0 0.0 209.4, 209.4 -0.23
CC051/TauUncJ f 469.2 0.0   1   0.0 0.0 469.2, 469.2 0.85
CC051/TauUncJ m 1423.0 0.0   1   0.0 0.0 1423.0, 1423.0 2.64
CC057/UncJ f 196.3 132.9   2   94.0 0.6772 102.3, 290.3 -0.28
CC057/UncJ m 145.6 91.2   2   64.49 0.6263 81.12, 210.1 -0.47
CC059/TauUncJ f 356.4 218.8   4 109.4 0.6141 163.2, 645.3 0.38
CC059/TauUncJ m 560.4 490.2   5 219.2 0.8747 146.1, 1318.0 0.54
CC060/UncJ f 636.2 0.0   1   0.0 0.0 636.2, 636.2 1.55
CC060/UncJ m 52.56 0.0   1   0.0 0.0 52.56, 52.56 -0.69
CC061/GeniUncJ f 159.1 89.98   3 51.95 0.5655 81.43, 257.7 -0.44
CC061/GeniUncJ m 366.7 205.8   2   145.5 0.5611 221.2, 512.2 0.07
CC074/UncJ f 88.84 0.0   1   0.0 0.0 88.84, 88.84 -0.73
CC074/UncJ m 2034.0 0.0   1   0.0 0.0 2034.0, 2034.0 4.13
CC075/UncJ f 391.5 308.9   2   218.4 0.7889 173.1, 609.9 0.53
CC075/UncJ m 73.67 0.0   1   0.0 0.0 73.67, 73.67 -0.64
CC078/TauUncJ f 115.1 43.541   3 25.139 0.3784 71.72, 158.8 -0.62
CC078/TauUncJ m 200.9 160.1   3 92.43 0.7967 103.7, 385.7 -0.33
CC079/TauUncJ f 207.1 0.0   1   0.0 0.0 207.1, 207.1 -0.24
CC079/TauUncJ m 99.16 86.47   2   61.15 0.8721 38.01, 160.3 -0.58
CC080/TauUncJ f 529.2 439.0   2   310.4 0.8296 218.8, 839.7 1.1
CC080/TauUncJ m 1815.0 0.0   1   0.0 0.0 1815.0, 1815.0 3.59
CC084/TauJ f 425.2 364.0   2   257.4 0.8561 167.8, 682.6 0.67
CC084/TauJ m 85.78 5.3387   2   3.775 0.0622 82.0, 89.55 -0.61
NOD/ShiLtJ f 100.6 61.19   8 21.633 0.6079 23.578, 211.2 -0.68
NOD/ShiLtJ m 169.7 143.4   11 43.229 0.845 30.97, 467.4 -0.41
NZO/HlLtJ f 155.3 120.4   3 69.54 0.7758 77.36, 294.0 -0.45
NZO/HlLtJ m 188.2 186.8   2   132.1 0.9927 56.1, 320.3 -0.36
PWK/PhJ f 208.4 250.7   9 83.57 1.2032 75.78, 870.9 -0.23
PWK/PhJ m 283.4 182.1   8 64.39 0.6427 33.307, 515.0 -0.13
WSB/EiJ f 343.6 280.3   8 99.09 0.8158 78.44, 897.8 0.33
WSB/EiJ m 305.1 412.2   6 168.3 1.3513 31.798, 1125.0 -0.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 302.756 147.956603986 594.585086569 10.926913431
129S1/SvImJ m 309.4925 128.1341777096 562.223902532 56.761097468
A/J f 340.2166666667 104.6211179998 546.5709927271 133.8623406063
A/J m 514.236 114.6066926399 740.2858384441 288.1861615559
C57BL/6J f 230.4655714286 68.4905989322 365.5561884505 95.3749544067
C57BL/6J m 293.82 77.2678164152 446.2227699889 141.4172300111
CAST/EiJ f 133.921 81.039169535 293.76237365 -25.92037365
CAST/EiJ m 238.001875 90.6045459602 416.7099635491 59.2937864509
CC001/UncJ f 396.3333333333 147.956603986 688.1624199023 104.5042467643
CC001/UncJ m 97.0 181.2090919204 454.4161770983 -260.4161770983
CC002/UncJ f 421.075 128.1341777096 673.8064025319 168.343597468
CC002/UncJ m 175.58 128.1341777096 428.311402532 -77.151402532
CC003/UncJ f 427.55 181.2090919204 784.9661770983 70.1338229017
CC003/UncJ m 140.59 147.956603986 432.419086569 -151.239086569
CC005/TauUncJ f 101.9033333333 147.956603986 393.7324199023 -189.9257532357
CC005/TauUncJ m 65.7315 181.2090919204 423.1476770983 -291.6846770983
CC006/TauUncJ f 83.616 181.2090919204 441.0321770983 -273.8001770983
CC006/TauUncJ m 86.48 181.2090919204 443.8961770983 -270.9361770983
CC009/UncJ f 196.95 181.2090919204 554.3661770983 -160.4661770983
CC009/UncJ m 101.585 181.2090919204 459.0011770983 -255.8311770983
CC011/UncJ f 108.884 147.956603986 400.713086569 -182.945086569
CC011/UncJ m 437.2 147.956603986 729.029086569 145.370913431
CC013/GeniUncJ f 94.71 181.2090919204 452.1261770983 -262.7061770983
CC013/GeniUncJ m 530.3 181.2090919204 887.7161770983 172.8838229017
CC016/GeniUncJ f 277.5866666667 147.956603986 569.4157532357 -14.2424199023
CC016/GeniUncJ m 83.608 128.1341777096 336.339402532 -169.123402532
CC017/UncJ f 173.505 181.2090919204 530.9211770983 -183.9111770983
CC017/UncJ m 624.9966666667 147.956603986 916.8257532357 333.1675800977
CC018/UncJ f 330.1666666667 147.956603986 621.9957532357 38.3375800977
CC018/UncJ m 100.845 181.2090919204 458.2611770983 -256.5711770983
CC019/TauUncJ f 124.2475 128.1341777096 376.978902532 -128.483902532
CC019/TauUncJ m 144.09625 128.1341777096 396.827652532 -108.635152532
CC025/GeniUncJ f 312.0443333333 147.956603986 603.8734199023 20.2152467643
CC025/GeniUncJ m 315.6 147.956603986 607.429086569 23.770913431
CC027/GeniUncJ f 702.7 181.2090919204 1060.1161770983 345.2838229017
CC027/GeniUncJ m 243.93 128.1341777096 496.661402532 -8.801402532
CC028/GeniUncJ f 305.2466666667 147.956603986 597.0757532357 13.4175800977
CC028/GeniUncJ m 156.99 147.956603986 448.819086569 -134.839086569
CC030/GeniUncJ f 63.9025 181.2090919204 421.3186770983 -293.5136770983
CC030/GeniUncJ m 164.97 181.2090919204 522.3861770983 -192.4461770983
CC033/GeniUncJ f 231.05 181.2090919204 588.4661770983 -126.3661770983
CC033/GeniUncJ m 63.5565 181.2090919204 420.9726770983 -293.8596770983
CC036/UncJ f 64.2256666667 147.956603986 356.0547532357 -227.6034199023
CC036/UncJ m 112.5 147.956603986 404.329086569 -179.329086569
CC037/TauUncJ f 244.0 181.2090919204 601.4161770983 -113.4161770983
CC037/TauUncJ m 200.0083333333 147.956603986 491.8374199023 -91.8207532357
CC040/TauUncJ f 295.8573333333 147.956603986 587.6864199023 4.0282467643
CC040/TauUncJ m 570.9333333333 147.956603986 862.7624199023 279.1042467643
CC041/TauUncJ f 244.3 147.956603986 536.129086569 -47.529086569
CC041/TauUncJ m 369.0 181.2090919204 726.4161770983 11.5838229017
CC043/GeniUncJ f 157.9775 181.2090919204 515.3936770983 -199.4386770983
CC043/GeniUncJ m 587.05 181.2090919204 944.4661770983 229.6338229017
CC057/UncJ f 196.3 181.2090919204 553.7161770983 -161.1161770983
CC057/UncJ m 145.61 181.2090919204 503.0261770983 -211.8061770983
CC059/TauUncJ f 356.35 128.1341777096 609.081402532 103.618597468
CC059/TauUncJ m 560.44 114.6066926399 786.4898384441 334.3901615559
CC061/GeniUncJ f 159.11 147.956603986 450.939086569 -132.719086569
CC061/GeniUncJ m 366.7 181.2090919204 724.1161770983 9.2838229017
CC078/TauUncJ f 115.0733333333 147.956603986 406.9024199023 -176.7557532357
CC078/TauUncJ m 200.9333333333 147.956603986 492.7624199023 -90.8957532357
CC084/TauJ f 425.2 181.2090919204 782.6161770983 67.7838229017
CC084/TauJ m 85.775 181.2090919204 443.1911770983 -271.6411770983
NOD/ShiLtJ f 100.6475 90.6045459602 279.3555885491 -78.0605885491
NOD/ShiLtJ m 169.6734545455 77.2678164152 322.0762245343 17.2706845566
NZO/HlLtJ f 155.2666666667 147.956603986 447.0957532357 -136.5624199023
NZO/HlLtJ m 188.2 181.2090919204 545.6161770983 -169.2161770983
PWK/PhJ f 208.3755555556 85.4227851397 376.8631572435 39.8879538676
PWK/PhJ m 283.375875 90.6045459602 462.0839635491 104.6677864509
WSB/EiJ f 343.5675 90.6045459602 522.2755885491 164.8594114509
WSB/EiJ m 305.068 104.6211179998 511.4223260604 98.7136739396


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 306.12425 97.8640947442 499.1510470992 113.0974529008
A/J both 427.2263333333 77.5890977029 580.2627974068 274.1898692598
C57BL/6J both 262.1427857143 51.6267314374 363.9711696596 160.314401769
CAST/EiJ both 185.9614375 60.7793771513 305.8424677375 66.0804072625
CC001/UncJ both 246.6666666667 116.9699658648 477.3778169278 15.9555164055
CC002/UncJ both 298.3275 90.6045459602 477.0355885491 119.6194114509
CC003/UncJ both 284.07 116.9699658648 514.7811502611 53.3588497389
CC005/TauUncJ both 83.8174166667 116.9699658648 314.5285669278 -146.8937335945
CC006/TauUncJ both 85.048 128.1341777096 337.779402532 -167.683402532
CC009/UncJ both 149.2675 128.1341777096 401.998902532 -103.463902532
CC011/UncJ both 273.042 104.6211179998 479.3963260604 66.6876739396
CC013/GeniUncJ both 312.505 128.1341777096 565.236402532 59.773597468
CC016/GeniUncJ both 180.5973333333 97.8640947442 373.6241304325 -12.4294637658
CC017/UncJ both 399.2508333333 116.9699658648 629.9619835945 168.5396830722
CC018/UncJ both 215.5058333333 116.9699658648 446.2169835945 -15.2053169278
CC019/TauUncJ both 134.171875 90.6045459602 312.8799635491 -44.5362135491
CC025/GeniUncJ both 313.8221666667 104.6211179998 520.1764927271 107.4678406063
CC027/GeniUncJ both 473.315 110.9674529895 692.1868149267 254.4431850733
CC028/GeniUncJ both 231.1183333333 104.6211179998 437.4726593937 24.7640072729
CC030/GeniUncJ both 114.43625 128.1341777096 367.167652532 -138.295152532
CC033/GeniUncJ both 147.30325 128.1341777096 400.034652532 -105.428152532
CC036/UncJ both 88.3628333333 104.6211179998 294.7171593937 -117.9914927271
CC037/TauUncJ both 222.0041666667 116.9699658648 452.7153169278 -8.7069835944
CC040/TauUncJ both 433.3953333333 104.6211179998 639.7496593937 227.0410072729
CC041/TauUncJ both 306.65 116.9699658648 537.3611502611 75.9388497389
CC043/GeniUncJ both 372.51375 128.1341777096 625.245152532 119.782347468
CC057/UncJ both 170.955 128.1341777096 423.686402532 -81.776402532
CC059/TauUncJ both 458.395 85.9550194799 627.9323788331 288.8576211669
CC061/GeniUncJ both 262.905 116.9699658648 493.6161502611 32.1938497389
CC078/TauUncJ both 158.0033333333 104.6211179998 364.3576593937 -48.3509927271
CC084/TauJ both 255.4875 128.1341777096 508.218902532 2.756097468
NOD/ShiLtJ both 135.1604772727 59.5388511861 252.5946984491 17.7262560964
NZO/HlLtJ both 171.7333333333 116.9699658648 402.4444835945 -58.9778169278
PWK/PhJ both 245.8757152778 62.2620188592 368.6811028178 123.0703277377
WSB/EiJ both 324.31775 69.2003650283 460.8083071795 187.8271928205




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA