Project measure / variable:   CSNA03   pct_omit_cc_acq_JAX

ID, description, units MPD:110497   pct_omit_cc_acq_JAX   percentage of responses considered omissions (reversal learning assay), CC   [%]  acquisition  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses considered omissions (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means45.787   % 40.802   %
Median of the strain means28.589   % 34.021   %
SD of the strain means± 42.839 ± 25.898
Coefficient of variation (CV)0.9356 0.6347
Min–max range of strain means1.1364   –   240.2   % 2.5478   –   100.0   %
Mean sample size per strain2.9   mice 2.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 88.3935 88.3935 0.0508 0.822
strain 31 197846.8456 6382.1563 3.6659 < 0.0001
sex:strain 31 98528.9222 3178.3523 1.8257 0.0084
Residuals 174 302924.0507 1740.9428


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 240.2 133.3   3 76.95 0.555 86.27, 319.0 4.54
129S1/SvImJ m 90.45 71.99   4 35.995 0.7959 40.0, 192.7 1.92
A/J f 98.05 38.828   6 15.852 0.396 50.0, 154.7 1.22
A/J m 82.71 39.396   5 17.619 0.4763 43.173, 144.6 1.62
C57BL/6J f 21.724 15.712   14 4.1993 0.7233 5.5556, 62.14 -0.56
C57BL/6J m 21.601 21.227   10 6.7125 0.9827 1.4925, 69.7 -0.74
CAST/EiJ f 13.002 6.3135   8 2.2322 0.4856 4.5455, 25.0 -0.77
CAST/EiJ m 52.98 67.25   8 23.777 1.2694 2.7027, 200.0 0.47
CC001/UncJ f 97.26 23.593   3 13.621 0.2426 70.37, 114.5 1.2
CC001/UncJ m 15.511 13.096   2   9.2605 0.8444 6.25, 24.771 -0.98
CC002/UncJ f 82.78 53.14   4 26.571 0.642 22.892, 130.0 0.86
CC002/UncJ m 55.72 44.477   3 25.679 0.7982 4.8544, 87.3 0.58
CC003/UncJ f 17.004 16.976   2   12.004 0.9984 5.0, 29.008 -0.67
CC003/UncJ m 28.241 38.102   3 21.998 1.3492 1.5748, 71.88 -0.49
CC004/TauUncJ f 1.1364 0.0   1   0.0 0.0 1.1364, 1.1364 -1.04
CC004/TauUncJ m 80.39 0.0   1   0.0 0.0 80.39, 80.39 1.53
CC005/TauUncJ f 99.05 162.8   3 93.97 1.6432 4.0404, 287.0 1.24
CC005/TauUncJ m 15.192 0.27224   2   0.1925 0.0179 15.0, 15.385 -0.99
CC006/TauUncJ f 29.863 1.0592   2   0.749 0.0355 29.114, 30.612 -0.37
CC006/TauUncJ m 15.0 14.142   2   10.0 0.9428 5.0, 25.0 -1.0
CC007/UncJ f 100.0 0.0   1   0.0 0.0 100.0, 100.0 1.27
CC008/GeniUncJ f 29.787 0.0   1   0.0 0.0 29.787, 29.787 -0.37
CC008/GeniUncJ m 100.0 0.0   1   0.0 0.0 100.0, 100.0 2.29
CC009/UncJ f 33.945 46.28   2   32.725 1.3634 1.2195, 66.67 -0.28
CC009/UncJ m 11.482 2.0952   2   1.4815 0.1825 10.0, 12.963 -1.13
CC011/UncJ f 49.291 48.131   3 27.789 0.9765 4.2373, 100.0 0.08
CC011/UncJ m 58.33 38.188   3 22.048 0.6547 25.0, 100.0 0.68
CC012/GeniUncJ f 26.34 15.481   3 8.9378 0.5877 12.162, 42.857 -0.45
CC012/GeniUncJ m 20.0 0.0   1   0.0 0.0 20.0, 20.0 -0.8
CC013/GeniUncJ f 76.05 45.752   2   32.352 0.6016 43.697, 108.4 0.71
CC013/GeniUncJ m 78.36 45.164   2   31.936 0.5763 46.429, 110.3 1.45
CC015/UncJ f 111.2 0.0   1   0.0 0.0 111.2, 111.2 1.53
CC015/UncJ m 92.31 0.0   1   0.0 0.0 92.31, 92.31 1.99
CC016/GeniUncJ f 20.547 12.756   3 7.3649 0.6208 5.9701, 29.67 -0.59
CC016/GeniUncJ m 20.528 18.602   4 9.3008 0.9062 5.6604, 45.0 -0.78
CC017/UncJ f 3.0072 1.8958   2   1.3405 0.6304 1.6667, 4.3478 -1.0
CC017/UncJ m 22.385 24.213   2   17.121 1.0817 5.2632, 39.506 -0.71
CC018/UncJ f 92.34 26.255   2   18.565 0.2843 73.77, 110.9 1.09
CC018/UncJ m 46.154 47.865   2   33.846 1.0371 12.308, 80.0 0.21
CC019/TauUncJ f 6.8708 2.7418   4 1.3709 0.3991 3.7975, 10.0 -0.91
CC019/TauUncJ m 87.24 131.1   4 65.55 1.5028 13.75, 283.3 1.79
CC023/GeniUncJ f 38.64 26.361   2   18.64 0.6822 20.0, 57.28 -0.17
CC023/GeniUncJ m 38.462 0.0   1   0.0 0.0 38.462, 38.462 -0.09
CC025/GeniUncJ f 86.34 28.194   3 16.278 0.3266 59.35, 115.6 0.95
CC025/GeniUncJ m 24.814 11.825   3 6.8274 0.4766 11.429, 33.846 -0.62
CC026/GeniUncJ f 53.12 0.0   1   0.0 0.0 53.12, 53.12 0.17
CC026/GeniUncJ m 36.997 0.05657   2   0.04 0.0015 36.957, 37.037 -0.15
CC027/GeniUncJ f 66.33 42.381   2   29.968 0.6389 36.364, 96.3 0.48
CC027/GeniUncJ m 68.54 30.284   4 15.142 0.4418 29.688, 103.3 1.07
CC028/GeniUncJ f 64.74 69.74   3 40.266 1.0772 8.8496, 142.9 0.44
CC028/GeniUncJ m 17.368 10.84   3 6.2583 0.6241 4.878, 24.324 -0.9
CC029/UncJ f 6.5476 0.0   1   0.0 0.0 6.5476, 6.5476 -0.92
CC029/UncJ m 9.6154 0.0   1   0.0 0.0 9.6154, 9.6154 -1.2
CC030/GeniUncJ f 5.0345 4.3468   2   3.0736 0.8634 1.9608, 8.1081 -0.95
CC030/GeniUncJ m 2.5478 0.0   1   0.0 0.0 2.5478, 2.5478 -1.48
CC032/GeniUncJ f 23.586 9.0708   2   6.414 0.3846 17.172, 30.0 -0.52
CC033/GeniUncJ f 15.201 3.2506   2   2.2985 0.2138 12.903, 17.5 -0.71
CC033/GeniUncJ m 23.991 21.201   2   14.992 0.8837 9.0, 38.983 -0.65
CC035/UncJ m 9.1398 0.0   1   0.0 0.0 9.1398, 9.1398 -1.22
CC036/UncJ f 27.812 1.4119   3 0.81516 0.0508 26.506, 29.31 -0.42
CC036/UncJ m 41.047 7.2737   3 4.1995 0.1772 35.714, 49.333 0.01
CC037/TauUncJ f 95.78 33.114   2   23.415 0.3457 72.37, 119.2 1.17
CC037/TauUncJ m 53.73 40.169   3 23.191 0.7476 22.222, 98.96 0.5
CC040/TauUncJ f 24.024 17.448   3 10.074 0.7263 5.4054, 40.0 -0.51
CC040/TauUncJ m 22.316 7.7244   2   5.462 0.3461 16.854, 27.778 -0.71
CC041/TauUncJ f 21.253 10.019   3 5.7844 0.4714 9.901, 28.859 -0.57
CC041/TauUncJ m 47.01 10.381   2   7.3405 0.2208 39.669, 54.35 0.24
CC043/GeniUncJ f 60.73 75.33   2   53.27 1.2404 7.4627, 114.0 0.35
CC043/GeniUncJ m 31.98 0.0   1   0.0 0.0 31.98, 31.98 -0.34
CC044/UncJ f 15.0 0.0   1   0.0 0.0 15.0, 15.0 -0.72
CC051/TauUncJ f 62.0 0.0   1   0.0 0.0 62.0, 62.0 0.38
CC051/TauUncJ m 61.7 0.0   1   0.0 0.0 61.7, 61.7 0.81
CC057/UncJ f 19.675 8.5404   2   6.039 0.4341 13.636, 25.714 -0.61
CC057/UncJ m 62.24 30.464   2   21.541 0.4895 40.698, 83.78 0.83
CC059/TauUncJ f 12.812 7.1579   4 3.5789 0.5587 7.4627, 23.35 -0.77
CC059/TauUncJ m 26.986 30.13   4 15.065 1.1165 3.8251, 71.26 -0.53
CC060/UncJ f 32.5 0.0   1   0.0 0.0 32.5, 32.5 -0.31
CC060/UncJ m 30.233 0.0   1   0.0 0.0 30.233, 30.233 -0.41
CC061/GeniUncJ f 28.494 28.552   3 16.484 1.002 7.3826, 60.98 -0.4
CC061/GeniUncJ m 23.566 4.2851   2   3.03 0.1818 20.536, 26.596 -0.67
CC074/UncJ f 93.62 0.0   1   0.0 0.0 93.62, 93.62 1.12
CC074/UncJ m 63.27 0.0   1   0.0 0.0 63.27, 63.27 0.87
CC075/UncJ f 6.3406 2.8182   2   1.9927 0.4445 4.3478, 8.3333 -0.92
CC075/UncJ m 64.0 0.0   1   0.0 0.0 64.0, 64.0 0.9
CC078/TauUncJ f 7.9528 9.6328   3 5.5615 1.2112 1.7241, 19.048 -0.88
CC078/TauUncJ m 22.172 24.133   3 13.933 1.0884 6.993, 50.0 -0.72
CC079/TauUncJ f 20.0 0.0   1   0.0 0.0 20.0, 20.0 -0.6
CC079/TauUncJ m 18.408 19.972   2   14.122 1.085 4.2857, 32.53 -0.86
CC080/TauUncJ f 34.572 5.8513   2   4.1375 0.1692 30.435, 38.71 -0.26
CC080/TauUncJ m 50.0 0.0   1   0.0 0.0 50.0, 50.0 0.36
CC084/TauJ f 22.784 11.008   2   7.784 0.4832 15.0, 30.568 -0.54
CC084/TauJ m 46.953 21.025   2   14.867 0.4478 32.086, 61.82 0.24
NOD/ShiLtJ f 23.358 23.173   8 8.1929 0.9921 1.8519, 60.91 -0.52
NOD/ShiLtJ m 52.18 46.427   10 14.682 0.8897 9.375, 150.0 0.44
NZO/HlLtJ f 79.38 20.329   2   14.375 0.2561 65.0, 93.75 0.78
NZO/HlLtJ m 8.6957 0.0   1   0.0 0.0 8.6957, 8.6957 -1.24
PWK/PhJ f 9.4957 5.9071   7 2.2327 0.6221 1.4851, 15.0 -0.85
PWK/PhJ m 12.735 13.103   8 4.6326 1.0289 0.97087, 40.0 -1.08
WSB/EiJ f 28.589 21.829   8 7.7176 0.7635 2.5316, 67.32 -0.4
WSB/EiJ m 34.021 13.149   6 5.3679 0.3865 16.418, 54.17 -0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 240.1566666667 24.0897130207 287.7023270418 192.6110062916
129S1/SvImJ m 90.4475 20.8623034458 131.6232497246 49.2717502754
A/J f 98.0466666667 17.0339994338 131.6665255339 64.4268077994
A/J m 82.7126 18.6598114688 119.5413101634 45.8838898366
C57BL/6J f 21.7242642857 11.1513702562 43.7336283018 -0.2850997304
C57BL/6J m 21.60086 13.1944792253 47.6426906989 -4.4409706989
CAST/EiJ f 13.0023 14.7518762377 42.1179518507 -16.1133518507
CAST/EiJ m 52.9772125 14.7518762377 82.0928643507 23.8615606493
CC001/UncJ f 97.2566666667 24.0897130207 144.8023270418 49.7110062916
CC001/UncJ m 15.5105 29.5037524754 73.7418037013 -42.7208037013
CC002/UncJ f 82.7805 20.8623034458 123.9562497246 41.6047502754
CC002/UncJ m 55.7181333333 24.0897130207 103.2637937084 8.1724729582
CC003/UncJ f 17.004 29.5037524754 75.2353037013 -41.2273037013
CC003/UncJ m 28.2409333333 24.0897130207 75.7865937084 -19.3047270418
CC005/TauUncJ f 99.0542666667 24.0897130207 146.5999270418 51.5086062916
CC005/TauUncJ m 15.1925 29.5037524754 73.4238037013 -43.0388037013
CC006/TauUncJ f 29.863 29.5037524754 88.0943037013 -28.3683037013
CC006/TauUncJ m 15.0 29.5037524754 73.2313037013 -43.2313037013
CC009/UncJ f 33.94475 29.5037524754 92.1760537013 -24.2865537013
CC009/UncJ m 11.4815 29.5037524754 69.7128037013 -46.7498037013
CC011/UncJ f 49.2911 24.0897130207 96.8367603751 1.7454396249
CC011/UncJ m 58.3333333333 24.0897130207 105.8789937084 10.7876729582
CC013/GeniUncJ f 76.0485 29.5037524754 134.2798037013 17.8171962987
CC013/GeniUncJ m 78.3645 29.5037524754 136.5958037013 20.1331962987
CC016/GeniUncJ f 20.5467 24.0897130207 68.0923603751 -26.9989603751
CC016/GeniUncJ m 20.528 20.8623034458 61.7037497246 -20.6477497246
CC017/UncJ f 3.00725 29.5037524754 61.2385537013 -55.2240537013
CC017/UncJ m 22.3846 29.5037524754 80.6159037013 -35.8467037013
CC018/UncJ f 92.335 29.5037524754 150.5663037013 34.1036962987
CC018/UncJ m 46.154 29.5037524754 104.3853037013 -12.0773037013
CC019/TauUncJ f 6.8708 20.8623034458 48.0465497246 -34.3049497246
CC019/TauUncJ m 87.2375 20.8623034458 128.4132497246 46.0617502754
CC025/GeniUncJ f 86.3366666667 24.0897130207 133.8823270418 38.7910062916
CC025/GeniUncJ m 24.814 24.0897130207 72.3596603751 -22.7316603751
CC027/GeniUncJ f 66.332 29.5037524754 124.5633037013 8.1006962987
CC027/GeniUncJ m 68.5395 20.8623034458 109.7152497246 27.3637502754
CC028/GeniUncJ f 64.7445333333 24.0897130207 112.2901937084 17.1988729582
CC028/GeniUncJ m 17.3676666667 24.0897130207 64.9133270418 -30.1779937084
CC033/GeniUncJ f 15.2015 29.5037524754 73.4328037013 -43.0298037013
CC033/GeniUncJ m 23.9915 29.5037524754 82.2228037013 -34.2398037013
CC036/UncJ f 27.8116666667 24.0897130207 75.3573270418 -19.7339937084
CC036/UncJ m 41.0473333333 24.0897130207 88.5929937084 -6.4983270418
CC037/TauUncJ f 95.785 29.5037524754 154.0163037013 37.5536962987
CC037/TauUncJ m 53.7273333333 24.0897130207 101.2729937084 6.1816729582
CC040/TauUncJ f 24.0241333333 24.0897130207 71.5697937084 -23.5215270418
CC040/TauUncJ m 22.316 29.5037524754 80.5473037013 -35.9153037013
CC041/TauUncJ f 21.2533333333 24.0897130207 68.7989937084 -26.2923270418
CC041/TauUncJ m 47.0095 29.5037524754 105.2408037013 -11.2218037013
CC057/UncJ f 19.675 29.5037524754 77.9063037013 -38.5563037013
CC057/UncJ m 62.239 29.5037524754 120.4703037013 4.0076962987
CC059/TauUncJ f 12.812275 20.8623034458 53.9880247246 -28.3634747246
CC059/TauUncJ m 26.985525 20.8623034458 68.1612747246 -14.1902247246
CC061/GeniUncJ f 28.4942 24.0897130207 76.0398603751 -19.0514603751
CC061/GeniUncJ m 23.566 29.5037524754 81.7973037013 -34.6653037013
CC078/TauUncJ f 7.9528333333 24.0897130207 55.4984937084 -39.5928270418
CC078/TauUncJ m 22.1722666667 24.0897130207 69.7179270418 -25.3733937084
CC084/TauJ f 22.784 29.5037524754 81.0153037013 -35.4473037013
CC084/TauJ m 46.953 29.5037524754 105.1843037013 -11.2783037013
NOD/ShiLtJ f 23.3584875 14.7518762377 52.4741393507 -5.7571643507
NOD/ShiLtJ m 52.1824 13.1944792253 78.2242306989 26.1405693011
PWK/PhJ f 9.4957142857 15.7704190553 40.6216553765 -21.6302268051
PWK/PhJ m 12.73490875 14.7518762377 41.8505606007 -16.3807431007
WSB/EiJ f 28.5892125 14.7518762377 57.7048643507 -0.5264393507
WSB/EiJ m 34.0208333333 17.0339994338 67.6406922006 0.4009744661


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 165.3020833333 15.9338474519 196.7505816516 133.8535850151
A/J both 90.3796333333 12.632752083 115.3127879801 65.4464786866
C57BL/6J both 21.6625621429 8.6378142579 38.7109422019 4.6141820838
CAST/EiJ both 32.98975625 10.4311517229 53.5776311123 12.4018813877
CC001/UncJ both 56.3835833333 19.0445903313 93.9717282439 18.7954384228
CC002/UncJ both 69.2493166667 15.9338474519 100.6978149849 37.8008183484
CC003/UncJ both 22.6224666667 19.0445903313 60.2106115772 -14.9656782439
CC005/TauUncJ both 57.1233833333 19.0445903313 94.7115282439 19.5352384228
CC006/TauUncJ both 22.4315 20.8623034458 63.6072497246 -18.7442497246
CC009/UncJ both 22.713125 20.8623034458 63.8888747246 -18.4626247246
CC011/UncJ both 53.8122166667 17.0339994338 87.4320755339 20.1923577994
CC013/GeniUncJ both 77.2065 20.8623034458 118.3822497246 36.0307502754
CC016/GeniUncJ both 20.53735 15.9338474519 51.9858483182 -10.9111483182
CC017/UncJ both 12.695925 20.8623034458 53.8716747246 -28.4798247246
CC018/UncJ both 69.2445 20.8623034458 110.4202497246 28.0687502754
CC019/TauUncJ both 47.05415 14.7518762377 76.1698018507 17.9384981493
CC025/GeniUncJ both 55.5753333333 17.0339994338 89.1951922006 21.9554744661
CC027/GeniUncJ both 67.43575 18.0672847655 103.0949952813 31.7765047187
CC028/GeniUncJ both 41.0561 17.0339994338 74.6759588672 7.4362411328
CC033/GeniUncJ both 19.5965 20.8623034458 60.7722497246 -21.5792497246
CC036/UncJ both 34.4295 17.0339994338 68.0493588672 0.8096411328
CC037/TauUncJ both 74.7561666667 19.0445903313 112.3443115772 37.1680217561
CC040/TauUncJ both 23.1700666667 19.0445903313 60.7582115772 -14.4180782439
CC041/TauUncJ both 34.1314166667 19.0445903313 71.7195615772 -3.4567282439
CC057/UncJ both 40.957 20.8623034458 82.1327497246 -0.2187497246
CC059/TauUncJ both 19.8989 14.7518762377 49.0145518507 -9.2167518507
CC061/GeniUncJ both 26.0301 19.0445903313 63.6182449105 -11.5580449105
CC078/TauUncJ both 15.06255 17.0339994338 48.6824088672 -18.5573088672
CC084/TauJ both 34.8685 20.8623034458 76.0442497246 -6.3072497246
NOD/ShiLtJ both 37.77044375 9.8958594189 57.3018167742 18.2390707258
PWK/PhJ both 11.1153115179 10.7972678224 32.4257865916 -10.1951635559
WSB/EiJ both 31.3050229167 11.2669315836 53.5424693356 9.0675764977




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA