Project measure / variable:   CSNA03   correct_cc_rev_JAX

ID, description, units MPD:110492   correct_cc_rev_JAX   total number of correct responses (successful response in central nose poke hole with subsequent response in correct flanking hole) (reversal learning assay), CC   [n]  reversal  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means56.27   n 59.61   n
Median of the strain means53.67   n 54.0   n
SD of the strain means± 21.555 ± 24.886
Coefficient of variation (CV)0.383 0.4175
Min–max range of strain means12.0   –   147.0   n 21.0   –   124.0   n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 102.8143 102.8143 0.0876 0.7675
strain 34 49226.4448 1447.8366 1.2339 0.1901
sex:strain 34 31899.5075 938.2208 0.7996 0.7775
Residuals 192 225280.5464 1173.3362


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 100 (100)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 30.667 11.59   3 6.6916 0.3779 23.0, 44.0 -1.19
129S1/SvImJ m 41.75 18.41   4 9.2048 0.441 26.0, 61.0 -0.72
A/J f 59.5 21.861   6 8.9247 0.3674 34.0, 98.0 0.15
A/J m 55.4 20.732   5 9.2715 0.3742 38.0, 80.0 -0.17
C57BL/6J f 60.36 43.473   14 11.619 0.7203 28.0, 203.0 0.19
C57BL/6J m 62.73 45.756   11 13.796 0.7294 11.0, 173.0 0.13
CAST/EiJ f 73.0 32.335   10 10.225 0.4429 26.0, 132.0 0.78
CAST/EiJ m 69.62 51.4   8 18.174 0.7383 18.0, 171.0 0.4
CC001/UncJ f 57.67 17.039   3 9.8376 0.2955 40.0, 74.0 0.06
CC001/UncJ m 67.5 65.76   2   46.5 0.9742 21.0, 114.0 0.32
CC002/UncJ f 59.5 22.487   4 11.244 0.3779 43.0, 92.0 0.15
CC002/UncJ m 62.75 17.914   4 8.9571 0.2855 47.0, 82.0 0.13
CC003/UncJ f 147.0 98.99   2   70.0 0.6734 77.0, 217.0 4.21
CC003/UncJ m 73.67 32.868   3 18.977 0.4462 46.0, 110.0 0.56
CC004/TauUncJ f 43.0 0.0   1   0.0 0.0 43.0, 43.0 -0.62
CC004/TauUncJ m 93.0 32.527   2   23.0 0.3498 70.0, 116.0 1.34
CC005/TauUncJ f 51.67 20.793   3 12.005 0.4024 28.0, 67.0 -0.21
CC005/TauUncJ m 43.0 4.2426   2   3.0 0.0987 40.0, 46.0 -0.67
CC006/TauUncJ f 31.5 10.607   2   7.5 0.3367 24.0, 39.0 -1.15
CC006/TauUncJ m 54.5 17.678   2   12.5 0.3244 42.0, 67.0 -0.21
CC007/UncJ f 43.0 0.0   1   0.0 0.0 43.0, 43.0 -0.62
CC008/GeniUncJ f 12.0 0.0   1   0.0 0.0 12.0, 12.0 -2.05
CC008/GeniUncJ m 48.0 0.0   1   0.0 0.0 48.0, 48.0 -0.47
CC009/UncJ f 76.5 57.28   2   40.5 0.7487 36.0, 117.0 0.94
CC009/UncJ m 50.0 1.4142   2   1.0 0.0283 49.0, 51.0 -0.39
CC011/UncJ f 30.667 24.502   3 14.146 0.799 6.0, 55.0 -1.19
CC011/UncJ m 53.33 20.551   3 11.865 0.3853 32.0, 73.0 -0.25
CC012/GeniUncJ f 53.67 5.8595   3 3.383 0.1092 47.0, 58.0 -0.12
CC012/GeniUncJ m 21.0 0.0   1   0.0 0.0 21.0, 21.0 -1.55
CC013/GeniUncJ f 30.5 2.1213   2   1.5 0.0696 29.0, 32.0 -1.2
CC013/GeniUncJ m 49.5 24.749   2   17.5 0.5 32.0, 67.0 -0.41
CC015/UncJ f 42.0 0.0   1   0.0 0.0 42.0, 42.0 -0.66
CC015/UncJ m 39.0 0.0   1   0.0 0.0 39.0, 39.0 -0.83
CC016/GeniUncJ f 68.0 7.5498   3 4.3589 0.111 61.0, 76.0 0.54
CC016/GeniUncJ m 39.0 23.958   4 11.979 0.6143 23.0, 74.0 -0.83
CC017/UncJ f 65.5 6.364   2   4.5 0.0972 61.0, 70.0 0.43
CC017/UncJ m 59.0 24.515   3 14.154 0.4155 35.0, 84.0 -0.02
CC018/UncJ f 79.0 35.679   3 20.599 0.4516 48.0, 118.0 1.05
CC018/UncJ m 36.5 9.1924   2   6.5 0.2518 30.0, 43.0 -0.93
CC019/TauUncJ f 83.5 83.71   4 41.854 1.0025 21.0, 207.0 1.26
CC019/TauUncJ m 71.75 34.702   4 17.351 0.4837 20.0, 93.0 0.49
CC023/GeniUncJ f 30.5 3.5355   2   2.5 0.1159 28.0, 33.0 -1.2
CC023/GeniUncJ m 41.0 0.0   1   0.0 0.0 41.0, 41.0 -0.75
CC025/GeniUncJ f 41.333 26.577   3 15.344 0.643 25.0, 72.0 -0.69
CC025/GeniUncJ m 54.0 11.533   3 6.6583 0.2136 43.0, 66.0 -0.23
CC026/GeniUncJ f 72.0 0.0   1   0.0 0.0 72.0, 72.0 0.73
CC026/GeniUncJ m 59.0 49.497   2   35.0 0.8389 24.0, 94.0 -0.02
CC027/GeniUncJ f 52.5 31.82   2   22.5 0.6061 30.0, 75.0 -0.17
CC027/GeniUncJ m 69.0 25.729   4 12.865 0.3729 31.0, 87.0 0.38
CC028/GeniUncJ f 46.333 23.544   3 13.593 0.5082 22.0, 69.0 -0.46
CC028/GeniUncJ m 59.67 23.459   3 13.544 0.3932 34.0, 80.0 0.0
CC029/UncJ f 42.0 0.0   1   0.0 0.0 42.0, 42.0 -0.66
CC029/UncJ m 32.0 0.0   1   0.0 0.0 32.0, 32.0 -1.11
CC030/GeniUncJ f 42.5 14.849   2   10.5 0.3494 32.0, 53.0 -0.64
CC030/GeniUncJ m 71.5 10.607   2   7.5 0.1483 64.0, 79.0 0.48
CC032/GeniUncJ f 74.5 0.70711   2   0.5 0.0095 74.0, 75.0 0.85
CC033/GeniUncJ f 85.5 4.9497   2   3.5 0.0579 82.0, 89.0 1.36
CC033/GeniUncJ m 39.5 2.1213   2   1.5 0.0537 38.0, 41.0 -0.81
CC035/UncJ m 124.0 0.0   1   0.0 0.0 124.0, 124.0 2.59
CC036/UncJ f 29.667 10.97   3 6.3333 0.3698 21.0, 42.0 -1.23
CC036/UncJ m 34.667 5.8595   3 3.383 0.169 28.0, 39.0 -1.0
CC037/TauUncJ f 50.0 22.627   2   16.0 0.4525 34.0, 66.0 -0.29
CC037/TauUncJ m 34.333 15.885   3 9.1712 0.4627 16.0, 44.0 -1.02
CC040/TauUncJ f 33.333 16.166   3 9.3333 0.485 16.0, 48.0 -1.06
CC040/TauUncJ m 106.0 48.508   3 28.006 0.4576 77.0, 162.0 1.86
CC041/TauUncJ f 48.0 13.892   3 8.0208 0.2894 39.0, 64.0 -0.38
CC041/TauUncJ m 41.5 9.1924   2   6.5 0.2215 35.0, 48.0 -0.73
CC043/GeniUncJ f 72.5 62.93   2   44.5 0.868 28.0, 117.0 0.75
CC043/GeniUncJ m 87.5 6.364   2   4.5 0.0727 83.0, 92.0 1.12
CC044/UncJ f 79.0 0.0   1   0.0 0.0 79.0, 79.0 1.05
CC051/TauUncJ f 71.0 0.0   1   0.0 0.0 71.0, 71.0 0.68
CC051/TauUncJ m 121.0 0.0   1   0.0 0.0 121.0, 121.0 2.47
CC057/UncJ f 32.5 4.9497   2   3.5 0.1523 29.0, 36.0 -1.1
CC057/UncJ m 49.0 16.971   2   12.0 0.3463 37.0, 61.0 -0.43
CC059/TauUncJ f 76.5 24.474   4 12.237 0.3199 62.0, 113.0 0.94
CC059/TauUncJ m 86.8 29.423   5 13.158 0.339 40.0, 115.0 1.09
CC060/UncJ f 65.0 0.0   1   0.0 0.0 65.0, 65.0 0.4
CC060/UncJ m 50.0 0.0   1   0.0 0.0 50.0, 50.0 -0.39
CC061/GeniUncJ f 64.33 22.679   3 13.094 0.3525 47.0, 90.0 0.37
CC061/GeniUncJ m 113.0 19.799   2   14.0 0.1752 99.0, 127.0 2.15
CC074/UncJ f 56.0 0.0   1   0.0 0.0 56.0, 56.0 -0.01
CC074/UncJ m 46.0 0.0   1   0.0 0.0 46.0, 46.0 -0.55
CC075/UncJ f 51.5 14.849   2   10.5 0.2883 41.0, 62.0 -0.22
CC075/UncJ m 36.0 0.0   1   0.0 0.0 36.0, 36.0 -0.95
CC078/TauUncJ f 62.0 27.404   3 15.822 0.442 31.0, 83.0 0.27
CC078/TauUncJ m 57.0 7.9373   3 4.5826 0.1393 51.0, 66.0 -0.1
CC079/TauUncJ f 44.0 0.0   1   0.0 0.0 44.0, 44.0 -0.57
CC079/TauUncJ m 32.0 7.0711   2   5.0 0.221 27.0, 37.0 -1.11
CC080/TauUncJ f 52.0 8.4853   2   6.0 0.1632 46.0, 58.0 -0.2
CC080/TauUncJ m 122.0 0.0   1   0.0 0.0 122.0, 122.0 2.51
CC084/TauJ f 81.0 35.355   2   25.0 0.4365 56.0, 106.0 1.15
CC084/TauJ m 42.0 2.8284   2   2.0 0.0673 40.0, 44.0 -0.71
NOD/ShiLtJ f 40.75 10.361   8 3.6633 0.2543 26.0, 56.0 -0.72
NOD/ShiLtJ m 57.18 37.207   11 11.218 0.6507 16.0, 156.0 -0.1
NZO/HlLtJ f 47.667 8.1445   3 4.7022 0.1709 42.0, 57.0 -0.4
NZO/HlLtJ m 44.0 2.8284   2   2.0 0.0643 42.0, 46.0 -0.63
PWK/PhJ f 71.22 53.43   9 17.81 0.7502 38.0, 211.0 0.69
PWK/PhJ m 71.0 54.49   8 19.264 0.7674 31.0, 194.0 0.46
WSB/EiJ f 56.5 17.08   8 6.0386 0.3023 22.0, 74.0 0.01
WSB/EiJ m 49.333 14.024   6 5.7252 0.2843 30.0, 72.0 -0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 30.6666666667 19.7765532802 69.6738709669 -8.3405376336
129S1/SvImJ m 41.75 17.12699754 75.5312298547 7.9687701453
A/J f 59.5 13.984134933 87.0822586759 31.9177413241
A/J m 55.4 15.3188523 85.6148505274 25.1851494726
C57BL/6J f 60.3571428571 9.1547652655 78.4139697457 42.3003159686
C57BL/6J m 62.7272727273 10.3279681137 83.0981207972 42.3564246573
CAST/EiJ f 73.0 10.8320643413 94.3651257005 51.6348742995
CAST/EiJ m 69.625 12.1106161019 93.511936707 45.738063293
CC001/UncJ f 57.6666666667 19.7765532803 96.6738709669 18.6594623664
CC001/UncJ m 67.5 24.2212322038 115.2738734141 19.7261265859
CC002/UncJ f 59.5 17.12699754 93.2812298547 25.7187701453
CC002/UncJ m 62.75 17.12699754 96.5312298547 28.9687701453
CC003/UncJ f 147.0 24.2212322038 194.7738734141 99.2261265859
CC003/UncJ m 73.6666666667 19.7765532802 112.6738709669 34.6594623664
CC005/TauUncJ f 51.6666666667 19.7765532803 90.6738709669 12.6594623664
CC005/TauUncJ m 43.0 24.2212322038 90.7738734141 -4.7738734141
CC006/TauUncJ f 31.5 24.2212322038 79.2738734141 -16.2738734141
CC006/TauUncJ m 54.5 24.2212322038 102.2738734141 6.7261265859
CC009/UncJ f 76.5 24.2212322038 124.2738734141 28.7261265859
CC009/UncJ m 50.0 24.2212322038 97.7738734141 2.2261265859
CC011/UncJ f 30.6666666667 19.7765532802 69.6738709669 -8.3405376336
CC011/UncJ m 53.3333333333 19.7765532803 92.3405376336 14.3261290331
CC013/GeniUncJ f 30.5 24.2212322038 78.2738734141 -17.2738734141
CC013/GeniUncJ m 49.5 24.2212322038 97.2738734141 1.7261265859
CC016/GeniUncJ f 68.0 19.7765532802 107.0072043003 28.9927956997
CC016/GeniUncJ m 39.0 17.12699754 72.7812298547 5.2187701453
CC017/UncJ f 65.5 24.2212322038 113.2738734141 17.7261265859
CC017/UncJ m 59.0 19.7765532802 98.0072043003 19.9927956997
CC018/UncJ f 79.0 19.7765532802 118.0072043003 39.9927956997
CC018/UncJ m 36.5 24.2212322038 84.2738734141 -11.2738734141
CC019/TauUncJ f 83.5 17.12699754 117.2812298547 49.7187701453
CC019/TauUncJ m 71.75 17.12699754 105.5312298547 37.9687701453
CC025/GeniUncJ f 41.3333333333 19.7765532802 80.3405376336 2.3261290331
CC025/GeniUncJ m 54.0 19.7765532803 93.0072043003 14.9927956997
CC027/GeniUncJ f 52.5 24.2212322038 100.2738734141 4.7261265859
CC027/GeniUncJ m 69.0 17.12699754 102.7812298547 35.2187701453
CC028/GeniUncJ f 46.3333333333 19.7765532802 85.3405376336 7.3261290331
CC028/GeniUncJ m 59.6666666667 19.7765532802 98.6738709669 20.6594623664
CC030/GeniUncJ f 42.5 24.2212322038 90.2738734141 -5.2738734141
CC030/GeniUncJ m 71.5 24.2212322038 119.2738734141 23.7261265859
CC033/GeniUncJ f 85.5 24.2212322038 133.2738734141 37.7261265859
CC033/GeniUncJ m 39.5 24.2212322038 87.2738734141 -8.2738734141
CC036/UncJ f 29.6666666667 19.7765532802 68.6738709669 -9.3405376336
CC036/UncJ m 34.6666666667 19.7765532802 73.6738709669 -4.3405376336
CC037/TauUncJ f 50.0 24.2212322038 97.7738734141 2.2261265859
CC037/TauUncJ m 34.3333333333 19.7765532802 73.3405376336 -4.6738709669
CC040/TauUncJ f 33.3333333333 19.7765532802 72.3405376336 -5.6738709669
CC040/TauUncJ m 106.0 19.7765532802 145.0072043003 66.9927956997
CC041/TauUncJ f 48.0 19.7765532802 87.0072043003 8.9927956997
CC041/TauUncJ m 41.5 24.2212322038 89.2738734141 -6.2738734141
CC043/GeniUncJ f 72.5 24.2212322038 120.2738734141 24.7261265859
CC043/GeniUncJ m 87.5 24.2212322038 135.2738734141 39.7261265859
CC057/UncJ f 32.5 24.2212322038 80.2738734141 -15.2738734141
CC057/UncJ m 49.0 24.2212322038 96.7738734141 1.2261265859
CC059/TauUncJ f 76.5 17.12699754 110.2812298547 42.7187701453
CC059/TauUncJ m 86.8 15.3188523 117.0148505274 56.5851494726
CC061/GeniUncJ f 64.3333333333 19.7765532802 103.3405376336 25.3261290331
CC061/GeniUncJ m 113.0 24.2212322038 160.7738734141 65.2261265859
CC078/TauUncJ f 62.0 19.7765532802 101.0072043003 22.9927956997
CC078/TauUncJ m 57.0 19.7765532802 96.0072043003 17.9927956997
CC084/TauJ f 81.0 24.2212322038 128.7738734141 33.2261265859
CC084/TauJ m 42.0 24.2212322038 89.7738734141 -5.7738734141
NOD/ShiLtJ f 40.75 12.1106161019 64.636936707 16.863063293
NOD/ShiLtJ m 57.1818181818 10.3279681137 77.5526662518 36.8109701119
NZO/HlLtJ f 47.6666666667 19.7765532802 86.6738709669 8.6594623664
NZO/HlLtJ m 44.0 24.2212322038 91.7738734141 -3.7738734141
PWK/PhJ f 71.2222222222 11.41799836 93.7430421253 48.7014023191
PWK/PhJ m 71.0 12.1106161019 94.886936707 47.113063293
WSB/EiJ f 56.5 12.1106161019 80.386936707 32.613063293
WSB/EiJ m 49.3333333333 13.984134933 76.9155920092 21.7510746575


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 36.2083333333 13.0809604424 62.0091738129 10.4074928537
A/J both 57.45 10.3709120333 77.9055505063 36.9944494937
C57BL/6J both 61.5422077922 6.9006639613 75.1530531772 47.9313624073
CAST/EiJ both 71.3125 8.124048256 87.3363442754 55.2886557246
CC001/UncJ both 62.5833333333 15.6347381583 93.4212360194 31.7454306472
CC002/UncJ both 61.125 12.1106161019 85.011936707 37.238063293
CC003/UncJ both 110.3333333333 15.6347381583 141.1712360194 79.4954306472
CC005/TauUncJ both 47.3333333333 15.6347381583 78.1712360194 16.4954306472
CC006/TauUncJ both 43.0 17.12699754 76.7812298547 9.2187701453
CC009/UncJ both 63.25 17.12699754 97.0312298547 29.4687701453
CC011/UncJ both 42.0 13.984134933 69.5822586759 14.4177413241
CC013/GeniUncJ both 40.0 17.12699754 73.7812298547 6.2187701453
CC016/GeniUncJ both 53.5 13.0809604424 79.3008404796 27.6991595204
CC017/UncJ both 62.25 15.6347381583 93.0879026861 31.4120973139
CC018/UncJ both 57.75 15.6347381583 88.5879026861 26.9120973139
CC019/TauUncJ both 77.625 12.1106161019 101.511936707 53.738063293
CC025/GeniUncJ both 47.6666666667 13.984134933 75.2489253425 20.0844079908
CC027/GeniUncJ both 60.75 14.8324149602 90.0054032252 31.4945967748
CC028/GeniUncJ both 53.0 13.984134933 80.5822586759 25.4177413241
CC030/GeniUncJ both 57.0 17.12699754 90.7812298547 23.2187701453
CC033/GeniUncJ both 62.5 17.12699754 96.2812298547 28.7187701453
CC036/UncJ both 32.1666666667 13.984134933 59.7489253425 4.5844079908
CC037/TauUncJ both 42.1666666667 15.6347381583 73.0045693528 11.3287639806
CC040/TauUncJ both 69.6666666667 13.984134933 97.2489253425 42.0844079908
CC041/TauUncJ both 44.75 15.6347381583 75.5879026861 13.9120973139
CC043/GeniUncJ both 80.0 17.12699754 113.7812298547 46.2187701453
CC057/UncJ both 40.75 17.12699754 74.5312298547 6.9687701453
CC059/TauUncJ both 81.65 11.489139225 104.3111378956 58.9888621044
CC061/GeniUncJ both 88.6666666667 15.6347381583 119.5045693528 57.8287639806
CC078/TauUncJ both 59.5 13.984134933 87.0822586759 31.9177413241
CC084/TauJ both 61.5 17.12699754 95.2812298547 27.7187701453
NOD/ShiLtJ both 48.9659090909 7.9582339078 64.6627017277 33.2691164541
NZO/HlLtJ both 45.8333333333 15.6347381583 76.6712360194 14.9954306472
PWK/PhJ both 71.1111111111 8.3222248966 87.525838297 54.6963839252
WSB/EiJ both 52.9166666667 9.2496358332 71.1606159301 34.6727174032




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA