Project measure / variable:   CSNA03   correct_cc_acq_JAX

ID, description, units MPD:110491   correct_cc_acq_JAX   total number of correct responses (successful response in central nose poke hole with subsequent response in correct flanking hole) (reversal learning assay), CC   [n]  acquisition  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - total number of correct responses (successful response in central nose poke hole with subsequent response in correct flanking hole) (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means50.48   n 46.475   n
Median of the strain means47.0   n 43.182   n
SD of the strain means± 27.176 ± 20.883
Coefficient of variation (CV)0.5383 0.4493
Min–max range of strain means17.0   –   159.0   n 17.0   –   121.0   n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3597.9409 3597.9409 4.3775 0.0377
strain 34 57175.9667 1681.6461 2.046 0.0014
sex:strain 34 16753.33 492.745 0.5995 0.9611
Residuals 192 157806.4418 821.9086


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 52.67 47.269   3 27.291 0.8975 21.0, 107.0 0.08
129S1/SvImJ m 33.25 21.808   4 10.904 0.6559 18.0, 65.0 -0.63
A/J f 60.67 21.059   6 8.5972 0.3471 19.0, 75.0 0.37
A/J m 64.8 21.776   5 9.7386 0.3361 48.0, 95.0 0.88
C57BL/6J f 51.64 22.242   14 5.9444 0.4307 16.0, 90.0 0.04
C57BL/6J m 43.182 19.276   11 5.8119 0.4464 18.0, 72.0 -0.16
CAST/EiJ f 66.5 33.334   10 10.541 0.5013 18.0, 135.0 0.59
CAST/EiJ m 53.38 28.555   8 10.096 0.535 18.0, 107.0 0.33
CC001/UncJ f 45.333 10.017   3 5.7831 0.221 34.0, 53.0 -0.19
CC001/UncJ m 58.0 5.6569   2   4.0 0.0975 54.0, 62.0 0.55
CC002/UncJ f 30.5 15.61   4 7.8049 0.5118 16.0, 50.0 -0.74
CC002/UncJ m 34.5 19.841   4 9.9205 0.5751 16.0, 59.0 -0.57
CC003/UncJ f 44.5 37.477   2   26.5 0.8422 18.0, 71.0 -0.22
CC003/UncJ m 52.67 21.548   3 12.441 0.4091 36.0, 77.0 0.3
CC004/TauUncJ f 159.0 0.0   1   0.0 0.0 159.0, 159.0 3.99
CC004/TauUncJ m 64.5 65.76   2   46.5 1.0195 18.0, 111.0 0.86
CC005/TauUncJ f 47.667 25.794   3 14.892 0.5411 19.0, 69.0 -0.1
CC005/TauUncJ m 18.0 1.4142   2   1.0 0.0786 17.0, 19.0 -1.36
CC006/TauUncJ f 48.0 32.527   2   23.0 0.6776 25.0, 71.0 -0.09
CC006/TauUncJ m 46.5 43.134   2   30.5 0.9276 16.0, 77.0 0.0
CC007/UncJ f 17.0 0.0   1   0.0 0.0 17.0, 17.0 -1.23
CC008/GeniUncJ f 33.0 0.0   1   0.0 0.0 33.0, 33.0 -0.64
CC008/GeniUncJ m 36.0 0.0   1   0.0 0.0 36.0, 36.0 -0.5
CC009/UncJ f 38.0 26.87   2   19.0 0.7071 19.0, 57.0 -0.46
CC009/UncJ m 27.0 14.142   2   10.0 0.5238 17.0, 37.0 -0.93
CC011/UncJ f 54.67 24.214   3 13.98 0.4429 27.0, 72.0 0.15
CC011/UncJ m 22.667 8.1445   3 4.7022 0.3593 17.0, 32.0 -1.14
CC012/GeniUncJ f 28.0 15.588   3 9.0 0.5567 19.0, 46.0 -0.83
CC012/GeniUncJ m 58.0 0.0   1   0.0 0.0 58.0, 58.0 0.55
CC013/GeniUncJ f 66.5 19.092   2   13.5 0.2871 53.0, 80.0 0.59
CC013/GeniUncJ m 49.5 9.1924   2   6.5 0.1857 43.0, 56.0 0.14
CC015/UncJ f 66.0 0.0   1   0.0 0.0 66.0, 66.0 0.57
CC015/UncJ m 37.0 0.0   1   0.0 0.0 37.0, 37.0 -0.45
CC016/GeniUncJ f 37.0 2.0   3 1.1547 0.0541 35.0, 39.0 -0.5
CC016/GeniUncJ m 25.5 12.61   4 6.3048 0.4945 17.0, 44.0 -1.0
CC017/UncJ f 23.0 8.4853   2   6.0 0.3689 17.0, 29.0 -1.01
CC017/UncJ m 29.0 13.0   3 7.5056 0.4483 16.0, 42.0 -0.84
CC018/UncJ f 40.333 22.189   3 12.811 0.5501 20.0, 64.0 -0.37
CC018/UncJ m 30.0 19.799   2   14.0 0.66 16.0, 44.0 -0.79
CC019/TauUncJ f 45.75 19.721   4 9.8605 0.4311 17.0, 60.0 -0.17
CC019/TauUncJ m 35.0 14.72   4 7.3598 0.4206 22.0, 53.0 -0.55
CC023/GeniUncJ f 47.0 42.426   2   30.0 0.9027 17.0, 77.0 -0.13
CC023/GeniUncJ m 121.0 0.0   1   0.0 0.0 121.0, 121.0 3.57
CC025/GeniUncJ f 53.33 15.631   3 9.0247 0.2931 39.0, 70.0 0.1
CC025/GeniUncJ m 46.0 26.23   3 15.144 0.5702 22.0, 74.0 -0.02
CC026/GeniUncJ f 21.0 0.0   1   0.0 0.0 21.0, 21.0 -1.08
CC026/GeniUncJ m 44.0 36.77   2   26.0 0.8357 18.0, 70.0 -0.12
CC027/GeniUncJ f 26.5 7.7782   2   5.5 0.2935 21.0, 32.0 -0.88
CC027/GeniUncJ m 44.5 14.271   4 7.1356 0.3207 29.0, 61.0 -0.09
CC028/GeniUncJ f 95.67 82.65   3 47.716 0.8639 36.0, 190.0 1.66
CC028/GeniUncJ m 79.33 55.15   3 31.84 0.6951 22.0, 132.0 1.57
CC029/UncJ f 88.0 0.0   1   0.0 0.0 88.0, 88.0 1.38
CC029/UncJ m 67.0 0.0   1   0.0 0.0 67.0, 67.0 0.98
CC030/GeniUncJ f 37.5 2.1213   2   1.5 0.0566 36.0, 39.0 -0.48
CC030/GeniUncJ m 45.0 33.941   2   24.0 0.7542 21.0, 69.0 -0.07
CC032/GeniUncJ f 60.5 62.93   2   44.5 1.0402 16.0, 105.0 0.37
CC033/GeniUncJ f 122.0 26.87   2   19.0 0.2202 103.0, 141.0 2.63
CC033/GeniUncJ m 46.0 15.556   2   11.0 0.3382 35.0, 57.0 -0.02
CC035/UncJ m 112.0 0.0   1   0.0 0.0 112.0, 112.0 3.14
CC036/UncJ f 53.33 13.868   3 8.0069 0.26 38.0, 65.0 0.1
CC036/UncJ m 38.333 12.014   3 6.9362 0.3134 26.0, 50.0 -0.39
CC037/TauUncJ f 43.5 6.364   2   4.5 0.1463 39.0, 48.0 -0.26
CC037/TauUncJ m 31.0 24.269   3 14.012 0.7829 16.0, 59.0 -0.74
CC040/TauUncJ f 25.667 9.2916   3 5.3645 0.362 18.0, 36.0 -0.91
CC040/TauUncJ m 42.0 20.785   3 12.0 0.4949 18.0, 54.0 -0.21
CC041/TauUncJ f 54.33 33.828   3 19.531 0.6226 16.0, 80.0 0.14
CC041/TauUncJ m 53.0 39.598   2   28.0 0.7471 25.0, 81.0 0.31
CC043/GeniUncJ f 32.5 2.1213   2   1.5 0.0653 31.0, 34.0 -0.66
CC043/GeniUncJ m 66.5 48.79   2   34.5 0.7337 32.0, 101.0 0.96
CC044/UncJ f 18.0 0.0   1   0.0 0.0 18.0, 18.0 -1.2
CC051/TauUncJ f 67.0 0.0   1   0.0 0.0 67.0, 67.0 0.61
CC051/TauUncJ m 31.0 0.0   1   0.0 0.0 31.0, 31.0 -0.74
CC057/UncJ f 19.5 3.5355   2   2.5 0.1813 17.0, 22.0 -1.14
CC057/UncJ m 41.0 22.627   2   16.0 0.5519 25.0, 57.0 -0.26
CC059/TauUncJ f 81.25 47.275   4 23.637 0.5818 39.0, 142.0 1.13
CC059/TauUncJ m 72.2 36.575   5 16.357 0.5066 19.0, 121.0 1.23
CC060/UncJ f 28.0 0.0   1   0.0 0.0 28.0, 28.0 -0.83
CC060/UncJ m 57.0 0.0   1   0.0 0.0 57.0, 57.0 0.5
CC061/GeniUncJ f 107.0 83.5   3 48.211 0.7804 24.0, 191.0 2.08
CC061/GeniUncJ m 70.0 39.598   2   28.0 0.5657 42.0, 98.0 1.13
CC074/UncJ f 36.0 0.0   1   0.0 0.0 36.0, 36.0 -0.53
CC074/UncJ m 35.0 0.0   1   0.0 0.0 35.0, 35.0 -0.55
CC075/UncJ f 25.0 11.314   2   8.0 0.4525 17.0, 33.0 -0.94
CC075/UncJ m 17.0 0.0   1   0.0 0.0 17.0, 17.0 -1.41
CC078/TauUncJ f 48.667 30.616   3 17.676 0.6291 30.0, 84.0 -0.07
CC078/TauUncJ m 41.0 41.581   3 24.007 1.0142 16.0, 89.0 -0.26
CC079/TauUncJ f 55.0 0.0   1   0.0 0.0 55.0, 55.0 0.17
CC079/TauUncJ m 41.5 9.1924   2   6.5 0.2215 35.0, 48.0 -0.24
CC080/TauUncJ f 47.0 21.213   2   15.0 0.4513 32.0, 62.0 -0.13
CC080/TauUncJ m 19.0 0.0   1   0.0 0.0 19.0, 19.0 -1.32
CC084/TauJ f 69.5 70.0   2   49.5 1.0072 20.0, 119.0 0.7
CC084/TauJ m 58.5 34.648   2   24.5 0.5923 34.0, 83.0 0.58
NOD/ShiLtJ f 36.625 17.41   8 6.1555 0.4754 19.0, 63.0 -0.51
NOD/ShiLtJ m 40.545 30.546   11 9.21 0.7534 16.0, 111.0 -0.28
NZO/HlLtJ f 23.0 5.5678   3 3.2146 0.2421 17.0, 28.0 -1.01
NZO/HlLtJ m 23.0 7.0711   2   5.0 0.3074 18.0, 28.0 -1.12
PWK/PhJ f 38.556 31.914   9 10.638 0.8278 16.0, 114.0 -0.44
PWK/PhJ m 44.25 36.586   8 12.935 0.8268 16.0, 120.0 -0.11
WSB/EiJ f 57.88 20.336   8 7.1899 0.3514 41.0, 100.0 0.27
WSB/EiJ m 32.167 16.57   6 6.7647 0.5151 17.0, 60.0 -0.69


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 52.6666666667 16.5520245599 85.3138218329 20.0195115005
129S1/SvImJ m 33.25 14.334473753 61.5232657352 4.9767342648
A/J f 60.6666666667 11.7040488087 83.7516914711 37.5816418622
A/J m 64.8 12.8211430933 90.0883776519 39.5116223481
C57BL/6J f 51.6428571429 7.6620985148 66.7555533695 36.5301609162
C57BL/6J m 43.1818181818 8.6440129101 60.2312389167 26.132397447
CAST/EiJ f 66.5 9.0659172239 84.3815833229 48.6184166771
CAST/EiJ m 53.375 10.1360035955 73.3672179277 33.3827820723
CC001/UncJ f 45.3333333333 16.5520245599 77.9804884995 12.6861781671
CC001/UncJ m 58.0 20.2720071909 97.9844358553 18.0155641447
CC002/UncJ f 30.5 14.334473753 58.7732657352 2.2267342648
CC002/UncJ m 34.5 14.334473753 62.7732657352 6.2267342648
CC003/UncJ f 44.5 20.2720071909 84.4844358553 4.5155641447
CC003/UncJ m 52.6666666667 16.5520245599 85.3138218329 20.0195115005
CC005/TauUncJ f 47.6666666667 16.5520245599 80.3138218329 15.0195115005
CC005/TauUncJ m 18.0 20.2720071909 57.9844358553 -21.9844358553
CC006/TauUncJ f 48.0 20.2720071909 87.9844358553 8.0155641447
CC006/TauUncJ m 46.5 20.2720071909 86.4844358553 6.5155641447
CC009/UncJ f 38.0 20.2720071909 77.9844358553 -1.9844358553
CC009/UncJ m 27.0 20.2720071909 66.9844358553 -12.9844358553
CC011/UncJ f 54.6666666667 16.5520245599 87.3138218329 22.0195115005
CC011/UncJ m 22.6666666667 16.5520245599 55.3138218329 -9.9804884995
CC013/GeniUncJ f 66.5 20.2720071909 106.4844358553 26.5155641447
CC013/GeniUncJ m 49.5 20.2720071909 89.4844358553 9.5155641447
CC016/GeniUncJ f 37.0 16.5520245599 69.6471551662 4.3528448338
CC016/GeniUncJ m 25.5 14.334473753 53.7732657352 -2.7732657352
CC017/UncJ f 23.0 20.2720071909 62.9844358553 -16.9844358553
CC017/UncJ m 29.0 16.5520245599 61.6471551662 -3.6471551662
CC018/UncJ f 40.3333333333 16.5520245599 72.9804884995 7.6861781671
CC018/UncJ m 30.0 20.2720071909 69.9844358553 -9.9844358553
CC019/TauUncJ f 45.75 14.334473753 74.0232657352 17.4767342648
CC019/TauUncJ m 35.0 14.334473753 63.2732657352 6.7267342648
CC025/GeniUncJ f 53.3333333333 16.5520245599 85.9804884995 20.6861781671
CC025/GeniUncJ m 46.0 16.5520245599 78.6471551662 13.3528448338
CC027/GeniUncJ f 26.5 20.2720071909 66.4844358553 -13.4844358553
CC027/GeniUncJ m 44.5 14.334473753 72.7732657352 16.2267342648
CC028/GeniUncJ f 95.6666666667 16.5520245599 128.3138218329 63.0195115005
CC028/GeniUncJ m 79.3333333333 16.5520245599 111.9804884995 46.6861781671
CC030/GeniUncJ f 37.5 20.2720071909 77.4844358553 -2.4844358553
CC030/GeniUncJ m 45.0 20.2720071909 84.9844358553 5.0155641447
CC033/GeniUncJ f 122.0 20.2720071909 161.9844358553 82.0155641447
CC033/GeniUncJ m 46.0 20.2720071909 85.9844358553 6.0155641447
CC036/UncJ f 53.3333333333 16.5520245599 85.9804884995 20.6861781671
CC036/UncJ m 38.3333333333 16.5520245599 70.9804884995 5.6861781671
CC037/TauUncJ f 43.5 20.2720071909 83.4844358553 3.5155641447
CC037/TauUncJ m 31.0 16.5520245599 63.6471551662 -1.6471551662
CC040/TauUncJ f 25.6666666667 16.5520245599 58.3138218329 -6.9804884995
CC040/TauUncJ m 42.0 16.5520245599 74.6471551662 9.3528448338
CC041/TauUncJ f 54.3333333333 16.5520245599 86.9804884995 21.6861781671
CC041/TauUncJ m 53.0 20.2720071909 92.9844358553 13.0155641447
CC043/GeniUncJ f 32.5 20.2720071909 72.4844358553 -7.4844358553
CC043/GeniUncJ m 66.5 20.2720071909 106.4844358553 26.5155641447
CC057/UncJ f 19.5 20.2720071909 59.4844358553 -20.4844358553
CC057/UncJ m 41.0 20.2720071909 80.9844358553 1.0155641447
CC059/TauUncJ f 81.25 14.334473753 109.5232657352 52.9767342648
CC059/TauUncJ m 72.2 12.8211430933 97.4883776519 46.9116223481
CC061/GeniUncJ f 107.0 16.5520245599 139.6471551662 74.3528448338
CC061/GeniUncJ m 70.0 20.2720071909 109.9844358553 30.0155641447
CC078/TauUncJ f 48.6666666667 16.5520245599 81.3138218329 16.0195115005
CC078/TauUncJ m 41.0 16.5520245599 73.6471551662 8.3528448338
CC084/TauJ f 69.5 20.2720071909 109.4844358553 29.5155641447
CC084/TauJ m 58.5 20.2720071909 98.4844358553 18.5155641447
NOD/ShiLtJ f 36.625 10.1360035955 56.6172179277 16.6327820723
NOD/ShiLtJ m 40.5454545455 8.6440129101 57.5948752803 23.4960338106
NZO/HlLtJ f 23.0 16.5520245599 55.6471551662 -9.6471551662
NZO/HlLtJ m 23.0 20.2720071909 62.9844358553 -16.9844358553
PWK/PhJ f 38.5555555556 9.5563158353 57.404399379 19.7067117321
PWK/PhJ m 44.25 10.1360035955 64.2422179277 24.2577820723
WSB/EiJ f 57.875 10.1360035955 77.8672179277 37.8827820723
WSB/EiJ m 32.1666666667 11.7040488087 55.2516914711 9.0816418622


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 42.9583333333 10.9481351701 64.5523967292 21.3642699375
A/J both 62.7333333333 8.6799549068 79.8536459363 45.6130207304
C57BL/6J both 47.4123376623 5.7755240637 58.8039610611 36.0207142636
CAST/EiJ both 59.9375 6.7994379179 73.3486874922 46.5263125078
CC001/UncJ both 51.6666666667 13.0855243741 77.4765090292 25.8568243041
CC002/UncJ both 32.5 10.1360035955 52.4922179277 12.5077820723
CC003/UncJ both 48.5833333333 13.0855243741 74.3931756959 22.7734909708
CC005/TauUncJ both 32.8333333333 13.0855243741 58.6431756959 7.0234909708
CC006/TauUncJ both 47.25 14.334473753 75.5232657352 18.9767342648
CC009/UncJ both 32.5 14.334473753 60.7732657352 4.2267342648
CC011/UncJ both 38.6666666667 11.7040488087 61.7516914711 15.5816418622
CC013/GeniUncJ both 58.0 14.334473753 86.2732657352 29.7267342648
CC016/GeniUncJ both 31.25 10.9481351701 52.8440633959 9.6559366041
CC017/UncJ both 26.0 13.0855243741 51.8098423625 0.1901576375
CC018/UncJ both 35.1666666667 13.0855243741 60.9765090292 9.3568243041
CC019/TauUncJ both 40.375 10.1360035955 60.3672179277 20.3827820723
CC025/GeniUncJ both 49.6666666667 11.7040488087 72.7516914711 26.5816418622
CC027/GeniUncJ both 35.5 12.41401842 59.9853663746 11.0146336254
CC028/GeniUncJ both 87.5 11.7040488087 110.5850248045 64.4149751955
CC030/GeniUncJ both 41.25 14.334473753 69.5232657352 12.9767342648
CC033/GeniUncJ both 84.0 14.334473753 112.2732657352 55.7267342648
CC036/UncJ both 45.8333333333 11.7040488087 68.9183581378 22.7483085289
CC037/TauUncJ both 37.25 13.0855243741 63.0598423625 11.4401576375
CC040/TauUncJ both 33.8333333333 11.7040488087 56.9183581378 10.7483085289
CC041/TauUncJ both 53.6666666667 13.0855243741 79.4765090292 27.8568243041
CC043/GeniUncJ both 49.5 14.334473753 77.7732657352 21.2267342648
CC057/UncJ both 30.25 14.334473753 58.5232657352 1.9767342648
CC059/TauUncJ both 76.725 9.61585732 95.691283239 57.758716761
CC061/GeniUncJ both 88.5 13.0855243741 114.3098423625 62.6901576375
CC078/TauUncJ both 44.8333333333 11.7040488087 67.9183581378 21.7483085289
CC084/TauJ both 64.0 14.334473753 92.2732657352 35.7267342648
NOD/ShiLtJ both 38.5852272727 6.6606592781 51.7226882628 25.4477662827
NZO/HlLtJ both 23.0 13.0855243741 48.8098423625 -2.8098423625
PWK/PhJ both 41.4027777778 6.965302241 55.1411154788 27.6644400768
WSB/EiJ both 45.0208333333 7.7415006201 60.2901419939 29.7515246727




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA