Project measure / variable:   CSNA03   trials_cc_rev_JAX

ID, description, units MPD:110490   trials_cc_rev_JAX   total number of trials (reversal learning assay), CC   [n]  reversal  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - total number of trials (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means127.1   n 131.1   n
Median of the strain means125.0   n 119.0   n
SD of the strain means± 49.956 ± 57.25
Coefficient of variation (CV)0.3929 0.4368
Min–max range of strain means34.0   –   320.5   n 44.0   –   310.0   n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 79.4743 79.4743 0.013 0.9093
strain 34 262852.3085 7730.9502 1.2669 0.1629
sex:strain 34 195117.467 5738.749 0.9404 0.5673
Residuals 192 1171635.3189 6102.2673


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 68.33 45.236   3 26.117 0.662 32.0, 119.0 -1.18
129S1/SvImJ m 105.5 81.88   4 40.942 0.7762 30.0, 222.0 -0.45
A/J f 130.0 53.17   6 21.706 0.409 87.0, 224.0 0.06
A/J m 120.0 36.804   5 16.459 0.3067 82.0, 162.0 -0.19
C57BL/6J f 143.5 96.85   14 25.885 0.6749 51.0, 442.0 0.33
C57BL/6J m 153.4 103.6   11 31.233 0.6754 52.0, 403.0 0.39
CAST/EiJ f 147.2 60.26   10 19.055 0.4094 47.0, 244.0 0.4
CAST/EiJ m 144.5 115.8   8 40.935 0.8013 25.0, 363.0 0.23
CC001/UncJ f 151.3 46.231   3 26.692 0.3055 98.0, 180.0 0.48
CC001/UncJ m 147.0 123.0   2   87.0 0.837 60.0, 234.0 0.28
CC002/UncJ f 115.0 24.617   4 12.309 0.2141 92.0, 145.0 -0.24
CC002/UncJ m 123.2 44.101   4 22.051 0.3578 88.0, 183.0 -0.14
CC003/UncJ f 320.5 101.1   2   71.5 0.3155 249.0, 392.0 3.87
CC003/UncJ m 172.3 103.4   3 59.68 0.5998 80.0, 284.0 0.72
CC004/TauUncJ f 136.0 0.0   1   0.0 0.0 136.0, 136.0 0.18
CC004/TauUncJ m 310.0 131.5   2   93.0 0.4243 217.0, 403.0 3.13
CC005/TauUncJ f 108.0 51.12   3 29.513 0.4733 59.0, 161.0 -0.38
CC005/TauUncJ m 91.0 18.385   2   13.0 0.202 78.0, 104.0 -0.7
CC006/TauUncJ f 75.5 13.435   2   9.5 0.1779 66.0, 85.0 -1.03
CC006/TauUncJ m 126.0 45.255   2   32.0 0.3592 94.0, 158.0 -0.09
CC007/UncJ f 111.0 0.0   1   0.0 0.0 111.0, 111.0 -0.32
CC008/GeniUncJ f 34.0 0.0   1   0.0 0.0 34.0, 34.0 -1.86
CC008/GeniUncJ m 82.0 0.0   1   0.0 0.0 82.0, 82.0 -0.86
CC009/UncJ f 187.5 173.2   2   122.5 0.924 65.0, 310.0 1.21
CC009/UncJ m 115.5 20.506   2   14.5 0.1775 101.0, 130.0 -0.27
CC011/UncJ f 103.7 99.61   3 57.51 0.9609 30.0, 217.0 -0.47
CC011/UncJ m 190.3 155.9   3 90.01 0.8191 45.0, 355.0 1.03
CC012/GeniUncJ f 129.0 23.643   3 13.65 0.1833 107.0, 154.0 0.04
CC012/GeniUncJ m 44.0 0.0   1   0.0 0.0 44.0, 44.0 -1.52
CC013/GeniUncJ f 68.5 0.70711   2   0.5 0.0103 68.0, 69.0 -1.17
CC013/GeniUncJ m 140.5 3.5355   2   2.5 0.0252 138.0, 143.0 0.16
CC015/UncJ f 105.0 0.0   1   0.0 0.0 105.0, 105.0 -0.44
CC015/UncJ m 76.0 0.0   1   0.0 0.0 76.0, 76.0 -0.96
CC016/GeniUncJ f 142.0 28.16   3 16.258 0.1983 118.0, 173.0 0.3
CC016/GeniUncJ m 85.25 59.76   4 29.879 0.701 33.0, 155.0 -0.8
CC017/UncJ f 143.0 39.598   2   28.0 0.2769 115.0, 171.0 0.32
CC017/UncJ m 118.0 45.078   3 26.026 0.382 66.0, 146.0 -0.23
CC018/UncJ f 223.3 37.233   3 21.497 0.1667 181.0, 251.0 1.92
CC018/UncJ m 103.0 39.598   2   28.0 0.3844 75.0, 131.0 -0.49
CC019/TauUncJ f 181.5 162.2   4 81.12 0.8938 49.0, 418.0 1.09
CC019/TauUncJ m 134.0 63.49   4 31.746 0.4738 39.0, 171.0 0.05
CC023/GeniUncJ f 54.0 14.142   2   10.0 0.2619 44.0, 64.0 -1.46
CC023/GeniUncJ m 73.0 0.0   1   0.0 0.0 73.0, 73.0 -1.01
CC025/GeniUncJ f 79.33 48.222   3 27.841 0.6078 34.0, 130.0 -0.96
CC025/GeniUncJ m 119.7 43.981   3 25.392 0.3675 82.0, 168.0 -0.2
CC026/GeniUncJ f 159.0 0.0   1   0.0 0.0 159.0, 159.0 0.64
CC026/GeniUncJ m 141.5 143.5   2   101.5 1.0144 40.0, 243.0 0.18
CC027/GeniUncJ f 136.0 76.37   2   54.0 0.5615 82.0, 190.0 0.18
CC027/GeniUncJ m 173.2 88.04   4 44.02 0.5082 63.0, 277.0 0.74
CC028/GeniUncJ f 103.7 81.0   3 46.767 0.7814 35.0, 193.0 -0.47
CC028/GeniUncJ m 151.7 49.662   3 28.672 0.3274 97.0, 194.0 0.36
CC029/UncJ f 96.0 0.0   1   0.0 0.0 96.0, 96.0 -0.62
CC029/UncJ m 100.0 0.0   1   0.0 0.0 100.0, 100.0 -0.54
CC030/GeniUncJ f 81.0 39.598   2   28.0 0.4889 53.0, 109.0 -0.92
CC030/GeniUncJ m 146.5 2.1213   2   1.5 0.0145 145.0, 148.0 0.27
CC032/GeniUncJ f 171.0 59.4   2   42.0 0.3474 129.0, 213.0 0.88
CC033/GeniUncJ f 193.5 6.364   2   4.5 0.0329 189.0, 198.0 1.33
CC033/GeniUncJ m 83.5 14.849   2   10.5 0.1778 73.0, 94.0 -0.83
CC035/UncJ m 271.0 0.0   1   0.0 0.0 271.0, 271.0 2.44
CC036/UncJ f 53.33 21.502   3 12.414 0.4032 32.0, 75.0 -1.48
CC036/UncJ m 71.0 13.892   3 8.0208 0.1957 62.0, 87.0 -1.05
CC037/TauUncJ f 102.5 31.82   2   22.5 0.3104 80.0, 125.0 -0.49
CC037/TauUncJ m 79.33 55.14   3 31.835 0.695 20.0, 129.0 -0.9
CC040/TauUncJ f 77.67 56.07   3 32.375 0.722 20.0, 132.0 -0.99
CC040/TauUncJ m 201.7 100.7   3 58.15 0.4995 131.0, 317.0 1.23
CC041/TauUncJ f 113.0 45.133   3 26.058 0.3994 70.0, 160.0 -0.28
CC041/TauUncJ m 108.0 16.971   2   12.0 0.1571 96.0, 120.0 -0.4
CC043/GeniUncJ f 139.0 117.4   2   83.0 0.8445 56.0, 222.0 0.24
CC043/GeniUncJ m 172.5 6.364   2   4.5 0.0369 168.0, 177.0 0.72
CC044/UncJ f 171.0 0.0   1   0.0 0.0 171.0, 171.0 0.88
CC051/TauUncJ f 132.0 0.0   1   0.0 0.0 132.0, 132.0 0.1
CC051/TauUncJ m 201.0 0.0   1   0.0 0.0 201.0, 201.0 1.22
CC057/UncJ f 69.0 8.4853   2   6.0 0.123 63.0, 75.0 -1.16
CC057/UncJ m 84.0 52.33   2   37.0 0.6229 47.0, 121.0 -0.82
CC059/TauUncJ f 170.0 43.413   4 21.706 0.2554 131.0, 224.0 0.86
CC059/TauUncJ m 204.6 114.7   5 51.28 0.5604 67.0, 373.0 1.28
CC060/UncJ f 118.0 0.0   1   0.0 0.0 118.0, 118.0 -0.18
CC060/UncJ m 94.0 0.0   1   0.0 0.0 94.0, 94.0 -0.65
CC061/GeniUncJ f 128.7 45.633   3 26.346 0.3547 90.0, 179.0 0.03
CC061/GeniUncJ m 288.5 27.577   2   19.5 0.0956 269.0, 308.0 2.75
CC074/UncJ f 127.0 0.0   1   0.0 0.0 127.0, 127.0 0.0
CC074/UncJ m 119.0 0.0   1   0.0 0.0 119.0, 119.0 -0.21
CC075/UncJ f 104.5 51.62   2   36.5 0.494 68.0, 141.0 -0.45
CC075/UncJ m 62.0 0.0   1   0.0 0.0 62.0, 62.0 -1.21
CC078/TauUncJ f 121.3 43.004   3 24.828 0.3544 78.0, 164.0 -0.12
CC078/TauUncJ m 116.7 13.796   3 7.9652 0.1183 101.0, 127.0 -0.25
CC079/TauUncJ f 125.0 0.0   1   0.0 0.0 125.0, 125.0 -0.04
CC079/TauUncJ m 63.5 27.577   2   19.5 0.4343 44.0, 83.0 -1.18
CC080/TauUncJ f 121.5 14.849   2   10.5 0.1222 111.0, 132.0 -0.11
CC080/TauUncJ m 188.0 0.0   1   0.0 0.0 188.0, 188.0 0.99
CC084/TauJ f 230.0 179.6   2   127.0 0.7809 103.0, 357.0 2.06
CC084/TauJ m 77.0 1.4142   2   1.0 0.0184 76.0, 78.0 -0.94
NOD/ShiLtJ f 93.5 32.509   8 11.494 0.3477 52.0, 147.0 -0.67
NOD/ShiLtJ m 115.7 79.68   11 24.024 0.6885 20.0, 293.0 -0.27
NZO/HlLtJ f 96.0 13.748   3 7.9373 0.1432 84.0, 111.0 -0.62
NZO/HlLtJ m 86.5 7.7782   2   5.5 0.0899 81.0, 92.0 -0.78
PWK/PhJ f 167.3 104.7   9 34.886 0.6254 96.0, 414.0 0.8
PWK/PhJ m 146.8 121.4   8 42.904 0.8269 62.0, 420.0 0.27
WSB/EiJ f 126.4 33.269   8 11.762 0.2633 94.0, 180.0 -0.01
WSB/EiJ m 101.2 46.219   6 18.869 0.4569 47.0, 163.0 -0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 68.3333333333 45.1008768804 157.2901446475 -20.6234779808
129S1/SvImJ m 105.5 39.0585051114 182.5388584377 28.4611415623
A/J f 130.0 31.8911358796 192.901964513 67.098035487
A/J m 120.0 34.9349890114 188.9056497503 51.0943502497
C57BL/6J f 143.5 20.8776491666 184.6790019632 102.3209980368
C57BL/6J m 153.3636363636 23.5531647867 199.8198159482 106.9074567791
CAST/EiJ f 147.2 24.7027676307 195.9236522005 98.4763477995
CAST/EiJ m 144.5 27.6185338273 198.9746992162 90.0253007838
CC001/UncJ f 151.3333333333 45.1008768804 240.2901446475 62.3765220192
CC001/UncJ m 147.0 55.2370676545 255.9493984324 38.0506015676
CC002/UncJ f 115.0 39.0585051114 192.0388584377 37.9611415623
CC002/UncJ m 123.25 39.0585051114 200.2888584377 46.2111415623
CC003/UncJ f 320.5 55.2370676545 429.4493984324 211.5506015676
CC003/UncJ m 172.3333333333 45.1008768804 261.2901446475 83.3765220192
CC005/TauUncJ f 108.0 45.1008768804 196.9568113142 19.0431886858
CC005/TauUncJ m 91.0 55.2370676545 199.9493984324 -17.9493984324
CC006/TauUncJ f 75.5 55.2370676545 184.4493984324 -33.4493984324
CC006/TauUncJ m 126.0 55.2370676545 234.9493984324 17.0506015676
CC009/UncJ f 187.5 55.2370676545 296.4493984324 78.5506015676
CC009/UncJ m 115.5 55.2370676545 224.4493984324 6.5506015676
CC011/UncJ f 103.6666666667 45.1008768804 192.6234779808 14.7098553525
CC011/UncJ m 190.3333333333 45.1008768804 279.2901446475 101.3765220192
CC013/GeniUncJ f 68.5 55.2370676545 177.4493984324 -40.4493984324
CC013/GeniUncJ m 140.5 55.2370676545 249.4493984324 31.5506015676
CC016/GeniUncJ f 142.0 45.1008768804 230.9568113142 53.0431886858
CC016/GeniUncJ m 85.25 39.0585051114 162.2888584377 8.2111415623
CC017/UncJ f 143.0 55.2370676545 251.9493984324 34.0506015676
CC017/UncJ m 118.0 45.1008768804 206.9568113142 29.0431886858
CC018/UncJ f 223.3333333333 45.1008768804 312.2901446475 134.3765220192
CC018/UncJ m 103.0 55.2370676545 211.9493984324 -5.9493984324
CC019/TauUncJ f 181.5 39.0585051114 258.5388584377 104.4611415623
CC019/TauUncJ m 134.0 39.0585051114 211.0388584377 56.9611415623
CC025/GeniUncJ f 79.3333333333 45.1008768804 168.2901446475 -9.6234779808
CC025/GeniUncJ m 119.6666666667 45.1008768804 208.6234779808 30.7098553525
CC027/GeniUncJ f 136.0 55.2370676545 244.9493984324 27.0506015676
CC027/GeniUncJ m 173.25 39.0585051114 250.2888584377 96.2111415623
CC028/GeniUncJ f 103.6666666667 45.1008768804 192.6234779808 14.7098553525
CC028/GeniUncJ m 151.6666666667 45.1008768804 240.6234779808 62.7098553525
CC030/GeniUncJ f 81.0 55.2370676545 189.9493984324 -27.9493984324
CC030/GeniUncJ m 146.5 55.2370676545 255.4493984324 37.5506015676
CC033/GeniUncJ f 193.5 55.2370676545 302.4493984324 84.5506015676
CC033/GeniUncJ m 83.5 55.2370676545 192.4493984324 -25.4493984324
CC036/UncJ f 53.3333333333 45.1008768804 142.2901446475 -35.6234779808
CC036/UncJ m 71.0 45.1008768804 159.9568113142 -17.9568113142
CC037/TauUncJ f 102.5 55.2370676545 211.4493984324 -6.4493984324
CC037/TauUncJ m 79.3333333333 45.1008768804 168.2901446475 -9.6234779808
CC040/TauUncJ f 77.6666666667 45.1008768804 166.6234779808 -11.2901446475
CC040/TauUncJ m 201.6666666667 45.1008768804 290.6234779808 112.7098553525
CC041/TauUncJ f 113.0 45.1008768804 201.9568113142 24.0431886858
CC041/TauUncJ m 108.0 55.2370676545 216.9493984324 -0.9493984324
CC043/GeniUncJ f 139.0 55.2370676545 247.9493984324 30.0506015676
CC043/GeniUncJ m 172.5 55.2370676545 281.4493984324 63.5506015676
CC057/UncJ f 69.0 55.2370676545 177.9493984324 -39.9493984324
CC057/UncJ m 84.0 55.2370676545 192.9493984324 -24.9493984324
CC059/TauUncJ f 170.0 39.0585051114 247.0388584377 92.9611415623
CC059/TauUncJ m 204.6 34.9349890114 273.5056497503 135.6943502497
CC061/GeniUncJ f 128.6666666667 45.1008768804 217.6234779808 39.7098553525
CC061/GeniUncJ m 288.5 55.2370676545 397.4493984324 179.5506015676
CC078/TauUncJ f 121.3333333333 45.1008768804 210.2901446475 32.3765220192
CC078/TauUncJ m 116.6666666667 45.1008768804 205.6234779808 27.7098553525
CC084/TauJ f 230.0 55.2370676545 338.9493984324 121.0506015676
CC084/TauJ m 77.0 55.2370676545 185.9493984324 -31.9493984324
NOD/ShiLtJ f 93.5 27.6185338273 147.9746992162 39.0253007838
NOD/ShiLtJ m 115.7272727273 23.5531647867 162.1834523119 69.2710931427
NZO/HlLtJ f 96.0 45.1008768804 184.9568113142 7.0431886858
NZO/HlLtJ m 86.5 55.2370676545 195.4493984324 -22.4493984324
PWK/PhJ f 167.3333333333 26.0390034076 218.6925722918 115.9740943749
PWK/PhJ m 146.75 27.6185338273 201.2246992162 92.2753007838
WSB/EiJ f 126.375 27.6185338273 180.8496992162 71.9003007838
WSB/EiJ m 101.1666666667 31.8911358796 164.0686311796 38.2647021537


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 86.9166666667 29.8314260341 145.7560667073 28.077266626
A/J both 125.0 23.6510993662 171.6493454056 78.3506545944
C57BL/6J both 148.4318181818 15.7371201796 179.4716588075 117.3919775561
CAST/EiJ both 145.85 18.527075723 182.3927391504 109.3072608496
CC001/UncJ both 149.1666666667 35.6553738532 219.4932009513 78.840132382
CC002/UncJ both 119.125 27.6185338273 173.5996992162 64.6503007838
CC003/UncJ both 246.4166666667 35.6553738532 316.7432009513 176.090132382
CC005/TauUncJ both 99.5 35.6553738532 169.8265342846 29.1734657154
CC006/TauUncJ both 100.75 39.0585051114 177.7888584377 23.7111415623
CC009/UncJ both 151.5 39.0585051114 228.5388584377 74.4611415623
CC011/UncJ both 147.0 31.8911358796 209.901964513 84.098035487
CC013/GeniUncJ both 104.5 39.0585051114 181.5388584377 27.4611415623
CC016/GeniUncJ both 113.625 29.8314260341 172.4644000406 54.7855999594
CC017/UncJ both 130.5 35.6553738532 200.8265342846 60.1734657154
CC018/UncJ both 163.1666666667 35.6553738532 233.4932009513 92.840132382
CC019/TauUncJ both 157.75 27.6185338273 212.2246992162 103.2753007838
CC025/GeniUncJ both 99.5 31.8911358796 162.401964513 36.598035487
CC027/GeniUncJ both 154.625 33.8256576603 221.3426084856 87.9073915144
CC028/GeniUncJ both 127.6666666667 31.8911358796 190.5686311796 64.7647021537
CC030/GeniUncJ both 113.75 39.0585051114 190.7888584377 36.7111415623
CC033/GeniUncJ both 138.5 39.0585051114 215.5388584377 61.4611415623
CC036/UncJ both 62.1666666667 31.8911358796 125.0686311796 -0.7352978463
CC037/TauUncJ both 90.9166666667 35.6553738532 161.2432009513 20.590132382
CC040/TauUncJ both 139.6666666667 31.8911358796 202.5686311796 76.7647021537
CC041/TauUncJ both 110.5 35.6553738532 180.8265342846 40.1734657154
CC043/GeniUncJ both 155.75 39.0585051114 232.7888584377 78.7111415623
CC057/UncJ both 76.5 39.0585051114 153.5388584377 -0.5388584377
CC059/TauUncJ both 187.3 26.2012417586 238.9792373127 135.6207626873
CC061/GeniUncJ both 208.5833333333 35.6553738532 278.909867618 138.2567990487
CC078/TauUncJ both 119.0 31.8911358796 181.901964513 56.098035487
CC084/TauJ both 153.5 39.0585051114 230.5388584377 76.4611415623
NOD/ShiLtJ both 104.6136363636 18.1489323531 140.4105268581 68.8167458692
NZO/HlLtJ both 91.25 35.6553738532 161.5765342846 20.9234657154
PWK/PhJ both 157.0416666667 18.9790220324 194.475823132 119.6075102013
WSB/EiJ both 113.7708333333 21.0940036412 155.376572103 72.1650945637




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA