Project measure / variable:   CSNA03   trials_cc_acq_JAX

ID, description, units MPD:110489   trials_cc_acq_JAX   total number of trials (reversal learning assay), CC   [n]  acquisition  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total number of trials (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means85.57   n 77.57   n
Median of the strain means82.0   n 72.62   n
SD of the strain means± 51.97 ± 40.34
Coefficient of variation (CV)0.6073 0.5201
Min–max range of strain means20.0   –   264.0   n 20.0   –   186.0   n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 12706.6584 12706.6584 3.757 0.0541
strain 34 267102.1802 7855.9465 2.3228 0.0002
sex:strain 34 79863.7739 2348.9345 0.6945 0.8965
Residuals 192 649364.5021 3382.1068


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 76.0 66.84   3 38.588 0.8794 33.0, 153.0 -0.18
129S1/SvImJ m 47.75 42.664   4 21.332 0.8935 20.0, 110.0 -0.74
A/J f 92.17 41.058   6 16.762 0.4455 20.0, 129.0 0.13
A/J m 138.0 83.41   5 37.304 0.6045 65.0, 271.0 1.5
C57BL/6J f 90.43 44.415   14 11.871 0.4912 20.0, 152.0 0.09
C57BL/6J m 74.82 44.445   11 13.401 0.594 20.0, 151.0 -0.07
CAST/EiJ f 117.6 73.24   10 23.16 0.6228 20.0, 284.0 0.62
CAST/EiJ m 82.0 44.951   8 15.892 0.5482 25.0, 163.0 0.11
CC001/UncJ f 69.33 11.504   3 6.6416 0.1659 58.0, 81.0 -0.31
CC001/UncJ m 110.5 2.1213   2   1.5 0.0192 109.0, 112.0 0.82
CC002/UncJ f 46.25 31.5   4 15.75 0.6811 20.0, 83.0 -0.76
CC002/UncJ m 53.5 37.917   4 18.958 0.7087 20.0, 103.0 -0.6
CC003/UncJ f 75.5 78.49   2   55.5 1.0396 20.0, 131.0 -0.19
CC003/UncJ m 87.33 34.53   3 19.936 0.3954 64.0, 127.0 0.24
CC004/TauUncJ f 264.0 0.0   1   0.0 0.0 264.0, 264.0 3.43
CC004/TauUncJ m 86.5 94.05   2   66.5 1.0872 20.0, 153.0 0.22
CC005/TauUncJ f 106.0 86.71   3 50.06 0.818 23.0, 196.0 0.39
CC005/TauUncJ m 23.0 4.2426   2   3.0 0.1845 20.0, 26.0 -1.35
CC006/TauUncJ f 103.5 77.07   2   54.5 0.7447 49.0, 158.0 0.35
CC006/TauUncJ m 68.0 67.88   2   48.0 0.9983 20.0, 116.0 -0.24
CC007/UncJ f 20.0 0.0   1   0.0 0.0 20.0, 20.0 -1.26
CC008/GeniUncJ f 47.0 0.0   1   0.0 0.0 47.0, 47.0 -0.74
CC008/GeniUncJ m 45.0 0.0   1   0.0 0.0 45.0, 45.0 -0.81
CC009/UncJ f 56.0 36.77   2   26.0 0.6566 30.0, 82.0 -0.57
CC009/UncJ m 37.0 24.042   2   17.0 0.6498 20.0, 54.0 -1.01
CC011/UncJ f 87.67 45.786   3 26.434 0.5223 35.0, 118.0 0.04
CC011/UncJ m 28.0 13.856   3 8.0 0.4949 20.0, 44.0 -1.23
CC012/GeniUncJ f 44.667 25.891   3 14.948 0.5796 25.0, 74.0 -0.79
CC012/GeniUncJ m 95.0 0.0   1   0.0 0.0 95.0, 95.0 0.43
CC013/GeniUncJ f 101.0 25.456   2   18.0 0.252 83.0, 119.0 0.3
CC013/GeniUncJ m 81.0 4.2426   2   3.0 0.0524 78.0, 84.0 0.09
CC015/UncJ f 89.0 0.0   1   0.0 0.0 89.0, 89.0 0.07
CC015/UncJ m 91.0 0.0   1   0.0 0.0 91.0, 91.0 0.33
CC016/GeniUncJ f 69.33 20.599   3 11.893 0.2971 50.0, 91.0 -0.31
CC016/GeniUncJ m 44.25 41.492   4 20.746 0.9377 20.0, 106.0 -0.83
CC017/UncJ f 41.5 26.163   2   18.5 0.6304 23.0, 60.0 -0.85
CC017/UncJ m 46.667 30.925   3 17.854 0.6627 21.0, 81.0 -0.77
CC018/UncJ f 63.67 45.059   3 26.015 0.7077 20.0, 110.0 -0.42
CC018/UncJ m 42.5 31.82   2   22.5 0.7487 20.0, 65.0 -0.87
CC019/TauUncJ f 87.0 49.565   4 24.782 0.5697 20.0, 126.0 0.03
CC019/TauUncJ m 54.0 28.19   4 14.095 0.522 24.0, 80.0 -0.58
CC023/GeniUncJ f 61.5 58.69   2   41.5 0.9543 20.0, 103.0 -0.46
CC023/GeniUncJ m 169.0 0.0   1   0.0 0.0 169.0, 169.0 2.27
CC025/GeniUncJ f 85.33 32.716   3 18.889 0.3834 64.0, 123.0 0.0
CC025/GeniUncJ m 73.33 43.108   3 24.889 0.5878 35.0, 120.0 -0.1
CC026/GeniUncJ f 32.0 0.0   1   0.0 0.0 32.0, 32.0 -1.03
CC026/GeniUncJ m 59.5 45.962   2   32.5 0.7725 27.0, 92.0 -0.45
CC027/GeniUncJ f 43.5 14.849   2   10.5 0.3414 33.0, 54.0 -0.81
CC027/GeniUncJ m 84.0 29.698   4 14.849 0.3536 58.0, 123.0 0.16
CC028/GeniUncJ f 158.3 131.0   3 75.64 0.8275 56.0, 306.0 1.4
CC028/GeniUncJ m 179.0 171.1   3 98.8 0.956 37.0, 369.0 2.51
CC029/UncJ f 168.0 0.0   1   0.0 0.0 168.0, 168.0 1.59
CC029/UncJ m 104.0 0.0   1   0.0 0.0 104.0, 104.0 0.66
CC030/GeniUncJ f 88.0 19.799   2   14.0 0.225 74.0, 102.0 0.05
CC030/GeniUncJ m 95.5 86.97   2   61.5 0.9107 34.0, 157.0 0.44
CC032/GeniUncJ f 109.0 125.9   2   89.0 1.1547 20.0, 198.0 0.45
CC033/GeniUncJ f 239.5 55.86   2   39.5 0.2332 200.0, 279.0 2.96
CC033/GeniUncJ m 79.5 28.991   2   20.5 0.3647 59.0, 100.0 0.05
CC035/UncJ m 186.0 0.0   1   0.0 0.0 186.0, 186.0 2.69
CC036/UncJ f 82.0 23.516   3 13.577 0.2868 58.0, 105.0 -0.07
CC036/UncJ m 60.0 16.703   3 9.6437 0.2784 42.0, 75.0 -0.44
CC037/TauUncJ f 64.0 16.971   2   12.0 0.2652 52.0, 76.0 -0.42
CC037/TauUncJ m 47.667 42.004   3 24.251 0.8812 20.0, 96.0 -0.74
CC040/TauUncJ f 40.667 12.897   3 7.4461 0.3171 30.0, 55.0 -0.86
CC040/TauUncJ m 60.33 35.949   3 20.755 0.5958 20.0, 89.0 -0.43
CC041/TauUncJ f 90.0 65.2   3 37.643 0.7244 20.0, 149.0 0.09
CC041/TauUncJ m 83.5 53.03   2   37.5 0.6351 46.0, 121.0 0.15
CC043/GeniUncJ f 62.0 7.0711   2   5.0 0.114 57.0, 67.0 -0.45
CC043/GeniUncJ m 123.5 103.9   2   73.5 0.8417 50.0, 197.0 1.14
CC044/UncJ f 20.0 0.0   1   0.0 0.0 20.0, 20.0 -1.26
CC051/TauUncJ f 100.0 0.0   1   0.0 0.0 100.0, 100.0 0.28
CC051/TauUncJ m 47.0 0.0   1   0.0 0.0 47.0, 47.0 -0.76
CC057/UncJ f 28.5 9.1924   2   6.5 0.3225 22.0, 35.0 -1.1
CC057/UncJ m 61.5 34.648   2   24.5 0.5634 37.0, 86.0 -0.4
CC059/TauUncJ f 128.8 59.46   4 29.728 0.4618 67.0, 197.0 0.83
CC059/TauUncJ m 137.6 99.18   5 44.355 0.7208 31.0, 286.0 1.49
CC060/UncJ f 40.0 0.0   1   0.0 0.0 40.0, 40.0 -0.88
CC060/UncJ m 86.0 0.0   1   0.0 0.0 86.0, 86.0 0.21
CC061/GeniUncJ f 235.7 172.2   3 99.41 0.7306 41.0, 368.0 2.89
CC061/GeniUncJ m 159.0 91.92   2   65.0 0.5781 94.0, 224.0 2.02
CC074/UncJ f 47.0 0.0   1   0.0 0.0 47.0, 47.0 -0.74
CC074/UncJ m 49.0 0.0   1   0.0 0.0 49.0, 49.0 -0.71
CC075/UncJ f 35.5 17.678   2   12.5 0.498 23.0, 48.0 -0.96
CC075/UncJ m 25.0 0.0   1   0.0 0.0 25.0, 25.0 -1.3
CC078/TauUncJ f 94.33 58.65   3 33.864 0.6218 58.0, 162.0 0.17
CC078/TauUncJ m 61.33 70.73   3 40.834 1.1532 20.0, 143.0 -0.4
CC079/TauUncJ f 90.0 0.0   1   0.0 0.0 90.0, 90.0 0.09
CC079/TauUncJ m 76.5 9.1924   2   6.5 0.1202 70.0, 83.0 -0.03
CC080/TauUncJ f 85.0 55.15   2   39.0 0.6489 46.0, 124.0 -0.01
CC080/TauUncJ m 20.0 0.0   1   0.0 0.0 20.0, 20.0 -1.43
CC084/TauJ f 124.5 147.8   2   104.5 1.187 20.0, 229.0 0.75
CC084/TauJ m 121.0 93.34   2   66.0 0.7714 55.0, 187.0 1.08
NOD/ShiLtJ f 62.12 36.377   8 12.861 0.5855 20.0, 117.0 -0.45
NOD/ShiLtJ m 63.36 54.33   11 16.382 0.8575 20.0, 167.0 -0.35
NZO/HlLtJ f 35.0 14.107   3 8.1445 0.403 20.0, 48.0 -0.97
NZO/HlLtJ m 33.5 14.849   2   10.5 0.4433 23.0, 44.0 -1.09
PWK/PhJ f 67.33 60.48   9 20.159 0.8982 20.0, 202.0 -0.35
PWK/PhJ m 72.62 62.88   8 22.23 0.8658 20.0, 199.0 -0.12
WSB/EiJ f 98.88 34.266   8 12.115 0.3466 63.0, 153.0 0.26
WSB/EiJ m 46.667 26.425   6 10.788 0.5662 20.0, 87.0 -0.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 76.0 33.5763149732 142.2258058445 9.7741941555
129S1/SvImJ m 47.75 29.0779417323 105.1032302474 -9.6032302474
A/J f 92.1666666667 23.7420400048 138.9953830688 45.3379502645
A/J m 138.0 26.0081017437 189.298288625 86.701711375
C57BL/6J f 90.4285714286 15.5428136393 121.0851625158 59.7719803413
C57BL/6J m 74.8181818182 17.5346586185 109.4034809537 40.2328826826
CAST/EiJ f 117.6 18.3905051087 153.87336775 81.32663225
CAST/EiJ m 82.0 20.5612097818 122.5548580309 41.4451419691
CC001/UncJ f 69.3333333333 33.5763149732 135.5591391778 3.1075274888
CC001/UncJ m 110.5 41.1224195637 191.6097160618 29.3902839382
CC002/UncJ f 46.25 29.0779417323 103.6032302474 -11.1032302474
CC002/UncJ m 53.5 29.0779417323 110.8532302474 -3.8532302474
CC003/UncJ f 75.5 41.1224195637 156.6097160618 -5.6097160618
CC003/UncJ m 87.3333333333 33.5763149732 153.5591391778 21.1075274888
CC005/TauUncJ f 106.0 33.5763149732 172.2258058445 39.7741941555
CC005/TauUncJ m 23.0 41.1224195637 104.1097160618 -58.1097160618
CC006/TauUncJ f 103.5 41.1224195637 184.6097160618 22.3902839382
CC006/TauUncJ m 68.0 41.1224195637 149.1097160618 -13.1097160618
CC009/UncJ f 56.0 41.1224195637 137.1097160618 -25.1097160618
CC009/UncJ m 37.0 41.1224195637 118.1097160618 -44.1097160618
CC011/UncJ f 87.6666666667 33.5763149732 153.8924725112 21.4408608222
CC011/UncJ m 28.0 33.5763149732 94.2258058445 -38.2258058445
CC013/GeniUncJ f 101.0 41.1224195637 182.1097160618 19.8902839382
CC013/GeniUncJ m 81.0 41.1224195637 162.1097160618 -0.1097160618
CC016/GeniUncJ f 69.3333333333 33.5763149732 135.5591391778 3.1075274888
CC016/GeniUncJ m 44.25 29.0779417323 101.6032302474 -13.1032302474
CC017/UncJ f 41.5 41.1224195637 122.6097160618 -39.6097160618
CC017/UncJ m 46.6666666667 33.5763149732 112.8924725112 -19.5591391778
CC018/UncJ f 63.6666666667 33.5763149732 129.8924725112 -2.5591391778
CC018/UncJ m 42.5 41.1224195637 123.6097160618 -38.6097160618
CC019/TauUncJ f 87.0 29.0779417323 144.3532302474 29.6467697526
CC019/TauUncJ m 54.0 29.0779417323 111.3532302474 -3.3532302474
CC025/GeniUncJ f 85.3333333333 33.5763149732 151.5591391778 19.1075274888
CC025/GeniUncJ m 73.3333333333 33.5763149732 139.5591391778 7.1075274888
CC027/GeniUncJ f 43.5 41.1224195637 124.6097160618 -37.6097160618
CC027/GeniUncJ m 84.0 29.0779417323 141.3532302474 26.6467697526
CC028/GeniUncJ f 158.3333333333 33.5763149732 224.5591391778 92.1075274888
CC028/GeniUncJ m 179.0 33.5763149732 245.2258058445 112.7741941555
CC030/GeniUncJ f 88.0 41.1224195637 169.1097160618 6.8902839382
CC030/GeniUncJ m 95.5 41.1224195637 176.6097160618 14.3902839382
CC033/GeniUncJ f 239.5 41.1224195637 320.6097160618 158.3902839382
CC033/GeniUncJ m 79.5 41.1224195637 160.6097160618 -1.6097160618
CC036/UncJ f 82.0 33.5763149732 148.2258058445 15.7741941555
CC036/UncJ m 60.0 33.5763149732 126.2258058445 -6.2258058445
CC037/TauUncJ f 64.0 41.1224195637 145.1097160618 -17.1097160618
CC037/TauUncJ m 47.6666666667 33.5763149732 113.8924725112 -18.5591391778
CC040/TauUncJ f 40.6666666667 33.5763149732 106.8924725112 -25.5591391778
CC040/TauUncJ m 60.3333333333 33.5763149732 126.5591391778 -5.8924725112
CC041/TauUncJ f 90.0 33.5763149732 156.2258058445 23.7741941555
CC041/TauUncJ m 83.5 41.1224195637 164.6097160618 2.3902839382
CC043/GeniUncJ f 62.0 41.1224195637 143.1097160618 -19.1097160618
CC043/GeniUncJ m 123.5 41.1224195637 204.6097160618 42.3902839382
CC057/UncJ f 28.5 41.1224195637 109.6097160618 -52.6097160618
CC057/UncJ m 61.5 41.1224195637 142.6097160618 -19.6097160618
CC059/TauUncJ f 128.75 29.0779417323 186.1032302474 71.3967697526
CC059/TauUncJ m 137.6 26.0081017437 188.898288625 86.301711375
CC061/GeniUncJ f 235.6666666667 33.5763149732 301.8924725112 169.4408608222
CC061/GeniUncJ m 159.0 41.1224195637 240.1097160618 77.8902839382
CC078/TauUncJ f 94.3333333333 33.5763149732 160.5591391778 28.1075274888
CC078/TauUncJ m 61.3333333333 33.5763149732 127.5591391778 -4.8924725112
CC084/TauJ f 124.5 41.1224195637 205.6097160618 43.3902839382
CC084/TauJ m 121.0 41.1224195637 202.1097160618 39.8902839382
NOD/ShiLtJ f 62.125 20.5612097818 102.6798580309 21.5701419691
NOD/ShiLtJ m 63.3636363636 17.5346586185 97.9489354992 28.7783372281
NZO/HlLtJ f 35.0 33.5763149732 101.2258058445 -31.2258058445
NZO/HlLtJ m 33.5 41.1224195637 114.6097160618 -47.6097160618
PWK/PhJ f 67.3333333333 19.3852944882 105.5688201649 29.0978465017
PWK/PhJ m 72.625 20.5612097818 113.1798580309 32.0701419691
WSB/EiJ f 98.875 20.5612097818 139.4298580309 58.3201419691
WSB/EiJ m 46.6666666667 23.7420400048 93.4953830688 -0.1620497355


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 61.875 22.2086448403 105.6792531598 18.0707468402
A/J both 115.0833333333 17.6075681164 149.8124389068 80.3542277599
C57BL/6J both 82.6233766234 11.7158365972 105.7316516206 59.5151016262
CAST/EiJ both 99.8 13.7928788315 127.0050258125 72.5949741875
CC001/UncJ both 89.9166666667 26.5444076876 142.2727632538 37.5605700795
CC002/UncJ both 49.875 20.5612097818 90.4298580309 9.3201419691
CC003/UncJ both 81.4166666667 26.5444076876 133.7727632538 29.0605700795
CC005/TauUncJ both 64.5 26.5444076876 116.8560965872 12.1439034128
CC006/TauUncJ both 85.75 29.0779417323 143.1032302474 28.3967697526
CC009/UncJ both 46.5 29.0779417323 103.8532302474 -10.8532302474
CC011/UncJ both 57.8333333333 23.7420400048 104.6620497355 11.0046169312
CC013/GeniUncJ both 91.0 29.0779417323 148.3532302474 33.6467697526
CC016/GeniUncJ both 56.7916666667 22.2086448403 100.5959198265 12.9874135068
CC017/UncJ both 44.0833333333 26.5444076876 96.4394299205 -8.2727632538
CC018/UncJ both 53.0833333333 26.5444076876 105.4394299205 0.7272367462
CC019/TauUncJ both 70.5 20.5612097818 111.0548580309 29.9451419691
CC025/GeniUncJ both 79.3333333333 23.7420400048 126.1620497355 32.5046169311
CC027/GeniUncJ both 63.75 25.1822362299 113.4193543834 14.0806456166
CC028/GeniUncJ both 168.6666666667 23.7420400048 215.4953830688 121.8379502645
CC030/GeniUncJ both 91.75 29.0779417323 149.1032302474 34.3967697526
CC033/GeniUncJ both 159.5 29.0779417323 216.8532302474 102.1467697526
CC036/UncJ both 71.0 23.7420400048 117.8287164022 24.1712835978
CC037/TauUncJ both 55.8333333333 26.5444076876 108.1894299205 3.4772367462
CC040/TauUncJ both 50.5 23.7420400048 97.3287164022 3.6712835978
CC041/TauUncJ both 86.75 26.5444076876 139.1060965872 34.3939034128
CC043/GeniUncJ both 92.75 29.0779417323 150.1032302474 35.3967697526
CC057/UncJ both 45.0 29.0779417323 102.3532302474 -12.3532302474
CC059/TauUncJ both 133.175 19.5060763077 171.6487164687 94.7012835313
CC061/GeniUncJ both 197.3333333333 26.5444076876 249.6894299205 144.9772367462
CC078/TauUncJ both 77.8333333333 23.7420400048 124.6620497355 31.0046169312
CC084/TauJ both 122.75 29.0779417323 180.1032302474 65.3967697526
NOD/ShiLtJ both 62.7443181818 13.5113618907 89.3940809678 36.0945553958
NZO/HlLtJ both 34.25 26.5444076876 86.6060965872 -18.1060965872
PWK/PhJ both 69.9791666667 14.1293399535 97.8478272156 42.1105061178
WSB/EiJ both 72.7708333333 15.7038833675 103.7451177875 41.7965488792




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA