Project measure / variable:   CSNA03   trials_in_rev_JAX

ID, description, units MPD:110460   trials_in_rev_JAX   total number of trials (reversal learning assay), founders   [n]  reversal  
Data set, strains CSNA03   inbred w/CC8   8 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total number of trials (reversal learning assay), founders reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means121.5   n 121.7   n
Median of the strain means128.2   n 117.8   n
SD of the strain means± 32.949 ± 24.247
Coefficient of variation (CV)0.2711 0.1992
Min–max range of strain means68.33   –   167.3   n 86.5   –   153.4   n
Mean sample size per strain7.6   mice 6.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 182.7316 182.7316 0.0269 0.8701
strain 7 57705.9967 8243.7138 1.2123 0.3031
sex:strain 7 9641.785 1377.3979 0.2026 0.9842
Residuals 100 679988.2023 6799.882


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 68.33 45.236   3 26.117 0.662 32.0, 119.0 -1.61
129S1/SvImJ m 105.5 81.88   4 40.942 0.7762 30.0, 222.0 -0.67
A/J f 130.0 53.17   6 21.706 0.409 87.0, 224.0 0.26
A/J m 120.0 36.804   5 16.459 0.3067 82.0, 162.0 -0.07
C57BL/6J f 143.5 96.85   14 25.885 0.6749 51.0, 442.0 0.67
C57BL/6J m 153.4 103.6   11 31.233 0.6754 52.0, 403.0 1.31
CAST/EiJ f 147.2 60.26   10 19.055 0.4094 47.0, 244.0 0.78
CAST/EiJ m 144.5 115.8   8 40.935 0.8013 25.0, 363.0 0.94
NOD/ShiLtJ f 93.5 32.509   8 11.494 0.3477 52.0, 147.0 -0.85
NOD/ShiLtJ m 115.7 79.68   11 24.024 0.6885 20.0, 293.0 -0.25
NZO/HlLtJ f 96.0 13.748   3 7.9373 0.1432 84.0, 111.0 -0.77
NZO/HlLtJ m 86.5 7.7782   2   5.5 0.0899 81.0, 92.0 -1.45
PWK/PhJ f 167.3 104.7   9 34.886 0.6254 96.0, 414.0 1.39
PWK/PhJ m 146.8 121.4   8 42.904 0.8269 62.0, 420.0 1.04
WSB/EiJ f 126.4 33.269   8 11.762 0.2633 94.0, 180.0 0.15
WSB/EiJ m 101.2 46.219   6 18.869 0.4569 47.0, 163.0 -0.85


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 68.3333333333 47.6091098521 162.7884513022 -26.1217846355
129S1/SvImJ m 105.5 41.2306985835 187.3005316785 23.6994683215
A/J f 130.0 33.6647244227 196.7898544335 63.2101455665
A/J m 120.0 36.877857917 193.1646197715 46.8353802285
C57BL/6J f 143.5 22.0387354167 187.224223371 99.775776629
C57BL/6J m 153.3636363636 24.8630467356 202.6912129507 104.0360597765
CAST/EiJ f 147.2 26.0765834087 198.9351987833 95.4648012167
CAST/EiJ m 144.5 29.1545065614 202.3417106545 86.6582893455
NOD/ShiLtJ f 93.5 29.1545065614 151.3417106545 35.6582893455
NOD/ShiLtJ m 115.7272727273 24.8630467356 165.0548493144 66.3996961402
NZO/HlLtJ f 96.0 47.6091098521 190.4551179688 1.5448820312
NZO/HlLtJ m 86.5 58.3090131229 202.183421309 -29.183421309
PWK/PhJ f 167.3333333333 27.487132389 221.867021119 112.7996455477
PWK/PhJ m 146.75 29.1545065614 204.5917106545 88.9082893455
WSB/EiJ f 126.375 29.1545065614 184.2167106545 68.5332893455
WSB/EiJ m 101.1666666667 33.6647244227 167.9565211002 34.3768122331


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 86.9166666667 31.4904662025 149.3928547174 24.440478616
A/J both 125.0 24.9664278332 174.5326817403 75.4673182597
C57BL/6J both 148.4318181818 16.6123218707 181.3901916298 115.4734447338
CAST/EiJ both 145.85 19.5574375566 184.6513990875 107.0486009125
NOD/ShiLtJ both 104.6136363636 19.1582641817 142.6230868444 66.6041858829
NZO/HlLtJ both 91.25 37.6383061264 165.9233273603 16.5766726397
PWK/PhJ both 157.0416666667 20.0345183359 196.7895804325 117.2937529008
WSB/EiJ both 113.7708333333 22.2671221945 157.9481695667 69.5934971




  GWAS USING LINEAR MIXED MODELS