Project measure / variable:   Wahlsten1   dist_EPM_min2

ID, description, units MPD:10841   dist_EPM_min2   distance traveled in 1 min   [cm]  during minute 2  
Data set, strains Wahlsten1   inbred   21 strains     sex: both     age: 9wks
Procedure elevated plus maze
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  STRAIN COMPARISON PLOT
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Wahlsten1 - distance traveled in 1 min during minute 2



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested21 strains21 strains
Mean of the strain means291   cm 295   cm
Median of the strain means261   cm 221   cm
SD of the strain means± 180 ± 198
Coefficient of variation (CV)0.617 0.673
Min–max range of strain means26.9   –   762   cm 58.4   –   854   cm
Mean sample size per strain8.9   mice 8.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3756.7875 3756.7875 0.1065 0.7443
strain 20 11071798.5939 553589.9297 15.6989 < 0.0001
sex:strain 20 809554.5121 40477.7256 1.1479 0.2991
Residuals 328 11566270.0476 35263.0184


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 400.0 360.0   7 136.0 0.899 99.3, 1192.0 0.61
129S1/SvImJ m 160.0 129.0   10 40.8 0.81 44.0, 497.0 -0.68
A/J f 41.2 44.1   8 15.6 1.07 2.2, 110.0 -1.39
A/J m 58.4 55.7   8 19.7 0.954 4.5, 186.0 -1.19
AKR/J f 215.0 125.0   8 44.2 0.582 42.7, 464.0 -0.42
AKR/J m 209.0 82.6   7 31.2 0.395 78.9, 297.0 -0.43
BALB/cByJ f 190.0 98.8   10 31.2 0.52 25.0, 351.0 -0.56
BALB/cByJ m 277.0 78.4   8 27.7 0.283 188.0, 439.0 -0.09
BTBR T+ Itpr3tf/J f 762.0 420.0   12 121.0 0.551 291.0, 1649.0 2.62
BTBR T+ Itpr3tf/J m 854.0 529.0   5 237.0 0.619 179.0, 1514.0 2.82
C3H/HeJ f 200.0 97.0   8 34.3 0.485 46.4, 297.0 -0.51
C3H/HeJ m 191.0 66.2   8 23.4 0.347 80.4, 313.0 -0.52
C57BL/6J f 638.0 266.0   8 94.0 0.416 349.0, 1100.0 1.93
C57BL/6J m 771.0 374.0   10 118.0 0.485 272.0, 1264.0 2.4
C57L/J f 316.0 79.5   10 25.1 0.251 140.0, 390.0 0.14
C57L/J m 347.0 91.7   6 37.4 0.264 200.0, 471.0 0.26
C58/J f 441.0 297.0   8 105.0 0.675 97.5, 894.0 0.83
C58/J m 265.0 191.0   10 60.5 0.72 38.1, 733.0 -0.15
CAST/EiJ f 161.0 102.0   8 36.1 0.635 40.2, 330.0 -0.72
CAST/EiJ m 129.0 32.0   9 10.7 0.249 66.6, 161.0 -0.84
DBA/2J f 159.0 89.9   8 31.8 0.566 54.4, 271.0 -0.74
DBA/2J m 200.0 134.0   8 47.4 0.671 46.2, 354.0 -0.48
FVB/NJ f 332.0 99.7   10 31.5 0.3 151.0, 488.0 0.23
FVB/NJ m 400.0 77.2   11 23.3 0.193 271.0, 502.0 0.53
MOLF/EiJ f 239.0 73.2   8 25.9 0.306 137.0, 332.0 -0.29
MOLF/EiJ m 221.0 69.3   7 26.2 0.314 132.0, 325.0 -0.37
NOD/ShiLtJ f 261.0 128.0   12 37.0 0.492 7.3, 451.0 -0.17
NOD/ShiLtJ m 342.0 123.0   12 35.4 0.359 212.0, 552.0 0.24
NZB/BlNJ f 456.0 386.0   6 158.0 0.847 48.7, 984.0 0.92
NZB/BlNJ m 446.0 333.0   12 96.1 0.747 49.6, 1001.0 0.76
PERA/EiJ f 211.0 65.9   10 20.8 0.312 96.4, 292.0 -0.45
PERA/EiJ m 137.0 75.0   11 22.6 0.548 17.1, 266.0 -0.8
PL/J f 311.0 190.0   12 54.8 0.611 162.0, 820.0 0.11
PL/J m 377.0 110.0   8 38.8 0.291 206.0, 515.0 0.41
SJL/J f 103.0 55.9   8 19.8 0.545 34.8, 166.0 -1.05
SJL/J m 180.0 112.0   10 35.5 0.624 25.8, 383.0 -0.58
SM/J f 315.0 182.0   14 48.6 0.577 48.7, 556.0 0.13
SM/J m 184.0 132.0   8 46.5 0.715 36.5, 378.0 -0.56
SPRET/EiJ f 26.9 11.4   6 4.67 0.426 7.0, 39.1 -1.47
SPRET/EiJ m 168.0 79.9   2   56.5 0.474 112.0, 225.0 -0.64
SWR/J f 335.0 149.0   9 49.6 0.445 186.0, 682.0 0.24
SWR/J m 277.0 119.0   10 37.7 0.431 130.0, 502.0 -0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 400.4714 70.9759 540.0968 260.8461
129S1/SvImJ m 159.5 59.3827 276.3189 42.6811
A/J f 41.1625 66.3918 171.7701 0.0
A/J m 58.4 66.3918 189.0076 0.0
AKR/J f 214.8375 66.3918 345.4451 84.2299
AKR/J m 208.9857 70.9759 348.6111 69.3604
BALB/cByJ f 189.77 59.3827 306.5889 72.9511
BALB/cByJ m 277.0 66.3918 407.6076 146.3924
BTBR T+ Itpr3tf/J f 762.0 54.2087 868.6406 655.3594
BTBR T+ Itpr3tf/J m 854.2 83.9798 1019.4069 688.9931
C3H/HeJ f 200.0875 66.3918 330.6951 69.4799
C3H/HeJ m 191.05 66.3918 321.6576 60.4424
C57BL/6J f 638.25 66.3918 768.8576 507.6424
C57BL/6J m 771.2 59.3827 888.0189 654.3811
C57L/J f 316.4 59.3827 433.2189 199.5811
C57L/J m 347.1667 76.6627 497.9793 196.3541
C58/J f 440.6875 66.3918 571.2951 310.0799
C58/J m 265.41 59.3827 382.2289 148.5911
CAST/EiJ f 160.8125 66.3918 291.4201 30.2049
CAST/EiJ m 128.6778 62.5948 251.8158 5.5398
DBA/2J f 158.9125 66.3918 289.5201 28.3049
DBA/2J m 199.65 66.3918 330.2576 69.0424
FVB/NJ f 332.3 59.3827 449.1189 215.4811
FVB/NJ m 399.5455 56.6192 510.928 288.163
MOLF/EiJ f 239.375 66.3918 369.9826 108.7674
MOLF/EiJ m 220.7143 70.9759 360.3396 81.0889
NOD/ShiLtJ f 260.6083 54.2087 367.249 153.9677
NOD/ShiLtJ m 342.1667 54.2087 448.8073 235.526
NZB/BlNJ f 456.45 76.6627 607.2626 305.6374
NZB/BlNJ m 445.7333 54.2087 552.374 339.0927
PERA/EiJ f 210.94 59.3827 327.7589 94.1211
PERA/EiJ m 136.7909 56.6192 248.1734 25.4084
PL/J f 310.75 54.2087 417.3906 204.1094
PL/J m 377.375 66.3918 507.9826 246.7674
SJL/J f 102.65 66.3918 233.2576 0.0
SJL/J m 179.82 59.3827 296.6389 63.0011
SM/J f 315.0643 50.1875 413.7943 216.3343
SM/J m 184.0625 66.3918 314.6701 53.4549
SPRET/EiJ f 26.9 76.6627 177.7126 0.0
SPRET/EiJ m 168.5 132.7837 429.7151 0.0
SWR/J f 334.6667 62.5948 457.8047 211.5287
SWR/J m 276.6 59.3827 393.4189 159.7811


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 279.9857 46.2706 371.0103 188.9611
A/J both 49.7812 46.9461 142.1347 0.0
AKR/J both 211.9116 48.5939 307.5065 116.3167
BALB/cByJ both 233.385 44.537 320.9992 145.7708
BTBR T+ Itpr3tf/J both 808.1 49.978 906.4178 709.7822
C3H/HeJ both 195.5688 46.9461 287.9222 103.2153
C57BL/6J both 704.725 44.537 792.3392 617.1108
C57L/J both 331.7833 48.4857 427.1656 236.4011
C58/J both 353.0487 44.537 440.663 265.4345
CAST/EiJ both 144.7451 45.6234 234.4966 54.9937
DBA/2J both 179.2813 46.9461 271.6347 86.9278
FVB/NJ both 365.9227 41.0245 446.627 285.2184
MOLF/EiJ both 230.0446 48.5939 325.6396 134.4497
NOD/ShiLtJ both 301.3875 38.3314 376.7938 225.9812
NZB/BlNJ both 451.0917 46.9461 543.4452 358.7382
PERA/EiJ both 173.8655 41.0245 254.5697 93.1612
PL/J both 344.0625 42.8558 428.3693 259.7557
SJL/J both 141.235 44.537 228.8492 53.6208
SM/J both 249.5634 41.6133 331.426 167.7008
SPRET/EiJ both 97.7 76.6627 248.5126 0.0
SWR/J both 305.6333 43.1405 390.5003 220.7663




  GWAS USING LINEAR MIXED MODELS