Project measure / variable:   Wahlsten1   dist_EPM_min1

ID, description, units MPD:10840   dist_EPM_min1   distance traveled in 1 min   [cm]  during minute 1  
Data set, strains Wahlsten1   inbred   21 strains     sex: both     age: 9wks
Procedure elevated plus maze
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  STRAIN COMPARISON PLOT
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Wahlsten1 - distance traveled in 1 min during minute 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested21 strains21 strains
Mean of the strain means323   cm 326   cm
Median of the strain means265   cm 260   cm
SD of the strain means± 168 ± 203
Coefficient of variation (CV)0.520 0.623
Min–max range of strain means91.8   –   761   cm 87.6   –   923   cm
Mean sample size per strain8.9   mice 8.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 13268.3358 13268.3358 0.3036 0.582
strain 20 10769489.4913 538474.4746 12.322 < 0.0001
sex:strain 20 717565.0536 35878.2527 0.821 0.6878
Residuals 328 14333698.555 43700.3005


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 392.0 371.0   7 140.0 0.944 126.0, 1198.0 0.41
129S1/SvImJ m 187.0 132.0   10 41.6 0.705 63.8, 498.0 -0.68
A/J f 91.8 133.0   8 46.9 1.45 10.3, 417.0 -1.38
A/J m 87.6 53.4   8 18.9 0.61 7.2, 164.0 -1.17
AKR/J f 253.0 170.0   8 60.2 0.674 84.6, 576.0 -0.42
AKR/J m 259.0 93.0   7 35.2 0.359 132.0, 384.0 -0.33
BALB/cByJ f 246.0 136.0   10 43.2 0.556 88.3, 495.0 -0.46
BALB/cByJ m 236.0 99.3   8 35.1 0.42 134.0, 424.0 -0.44
BTBR T+ Itpr3tf/J f 761.0 427.0   12 123.0 0.562 350.0, 1660.0 2.61
BTBR T+ Itpr3tf/J m 923.0 669.0   5 299.0 0.725 178.0, 1693.0 2.94
C3H/HeJ f 241.0 64.9   8 22.9 0.269 170.0, 348.0 -0.49
C3H/HeJ m 238.0 98.8   8 34.9 0.415 81.5, 346.0 -0.43
C57BL/6J f 614.0 218.0   8 77.1 0.355 362.0, 993.0 1.73
C57BL/6J m 754.0 403.0   10 127.0 0.534 260.0, 1276.0 2.11
C57L/J f 265.0 47.6   10 15.1 0.18 182.0, 350.0 -0.34
C57L/J m 358.0 101.0   6 41.3 0.282 262.0, 546.0 0.16
C58/J f 579.0 452.0   8 160.0 0.781 130.0, 1532.0 1.52
C58/J m 454.0 385.0   10 122.0 0.848 60.7, 1219.0 0.63
CAST/EiJ f 216.0 114.0   8 40.2 0.525 94.2, 408.0 -0.64
CAST/EiJ m 176.0 43.7   9 14.6 0.248 114.0, 260.0 -0.74
DBA/2J f 241.0 54.0   8 19.1 0.224 168.0, 296.0 -0.49
DBA/2J m 143.0 68.8   8 24.3 0.48 76.4, 285.0 -0.9
FVB/NJ f 310.0 122.0   10 38.4 0.393 121.0, 542.0 -0.08
FVB/NJ m 408.0 86.6   11 26.1 0.213 282.0, 521.0 0.41
MOLF/EiJ f 234.0 88.0   8 31.1 0.377 127.0, 376.0 -0.53
MOLF/EiJ m 260.0 111.0   7 41.8 0.426 108.0, 411.0 -0.32
NOD/ShiLtJ f 339.0 151.0   12 43.5 0.444 14.6, 588.0 0.1
NOD/ShiLtJ m 362.0 88.8   12 25.6 0.246 213.0, 499.0 0.18
NZB/BlNJ f 472.0 328.0   6 134.0 0.696 46.2, 854.0 0.89
NZB/BlNJ m 460.0 326.0   12 94.2 0.709 53.9, 1241.0 0.66
PERA/EiJ f 179.0 87.4   10 27.6 0.489 74.7, 319.0 -0.86
PERA/EiJ m 122.0 65.2   11 19.7 0.535 41.1, 234.0 -1.0
PL/J f 364.0 135.0   12 38.9 0.371 142.0, 536.0 0.24
PL/J m 386.0 159.0   8 56.3 0.413 205.0, 631.0 0.3
SJL/J f 108.0 88.3   8 31.2 0.815 5.7, 282.0 -1.28
SJL/J m 155.0 103.0   10 32.7 0.667 41.0, 333.0 -0.84
SM/J f 333.0 181.0   14 48.4 0.544 78.0, 717.0 0.06
SM/J m 240.0 129.0   8 45.6 0.539 67.7, 403.0 -0.42
SPRET/EiJ f 171.0 161.0   6 65.6 0.939 21.8, 394.0 -0.9
SPRET/EiJ m 350.0 80.6   2   57.0 0.23 293.0, 407.0 0.12
SWR/J f 372.0 161.0   9 53.7 0.434 140.0, 699.0 0.29
SWR/J m 281.0 119.0   10 37.7 0.424 101.0, 440.0 -0.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 392.4286 79.012 547.8628 236.9943
129S1/SvImJ m 186.56 66.1062 316.6056 56.5144
A/J f 91.7875 73.909 237.1829 0.0
A/J m 87.5875 73.909 232.9829 0.0
AKR/J f 252.5125 73.909 397.9079 107.1171
AKR/J m 259.1429 79.012 414.5771 103.7086
BALB/cByJ f 245.53 66.1062 375.5756 115.4844
BALB/cByJ m 236.25 73.909 381.6454 90.8546
BTBR T+ Itpr3tf/J f 760.75 60.3464 879.4649 642.0351
BTBR T+ Itpr3tf/J m 922.8 93.4883 1106.7123 738.8877
C3H/HeJ f 241.25 73.909 386.6454 95.8546
C3H/HeJ m 238.1875 73.909 383.5829 92.7921
C57BL/6J f 613.625 73.909 759.0204 468.2296
C57BL/6J m 754.1 66.1062 884.1456 624.0544
C57L/J f 265.2 66.1062 395.2456 135.1544
C57L/J m 358.3333 85.3427 526.2215 190.4451
C58/J f 579.25 73.909 724.6454 433.8546
C58/J m 453.88 66.1062 583.9256 323.8344
CAST/EiJ f 216.4 73.909 361.7954 71.0046
CAST/EiJ m 176.2222 69.6821 313.3024 39.1421
DBA/2J f 241.0 73.909 386.3954 95.6046
DBA/2J m 143.2625 73.909 288.6579 0.0
FVB/NJ f 309.5 66.1062 439.5456 179.4544
FVB/NJ m 407.5455 63.0298 531.5391 283.5518
MOLF/EiJ f 233.5 73.909 378.8954 88.1046
MOLF/EiJ m 259.8571 79.012 415.2914 104.4229
NOD/ShiLtJ f 339.3 60.3464 458.0149 220.5851
NOD/ShiLtJ m 361.6667 60.3464 480.3815 242.9518
NZB/BlNJ f 471.7 85.3427 639.5882 303.8118
NZB/BlNJ m 460.325 60.3464 579.0399 341.6101
PERA/EiJ f 178.8 66.1062 308.8456 48.7544
PERA/EiJ m 121.7455 63.0298 245.7391 0.0
PL/J f 363.5 60.3464 482.2149 244.7851
PL/J m 385.5 73.909 530.8954 240.1046
SJL/J f 108.325 73.909 253.7204 0.0
SJL/J m 154.88 66.1062 284.9256 24.8344
SM/J f 332.6429 55.8699 442.5515 222.7342
SM/J m 239.6875 73.909 385.0829 94.2921
SPRET/EiJ f 171.1 85.3427 338.9882 3.2118
SPRET/EiJ m 350.0 147.818 640.7909 59.2091
SWR/J f 371.6667 69.6821 508.7468 234.5865
SWR/J m 281.2 66.1062 411.2456 151.1544


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 289.4943 51.5095 390.825 188.1635
A/J both 89.6875 52.2615 192.4976 0.0
AKR/J both 255.8277 54.0958 362.2462 149.4091
BALB/cByJ both 240.89 49.5797 338.4242 143.3558
BTBR T+ Itpr3tf/J both 841.775 55.6367 951.2247 732.3253
C3H/HeJ both 239.7188 52.2615 342.5288 136.9087
C57BL/6J both 683.8625 49.5797 781.3967 586.3283
C57L/J both 311.7667 53.9755 417.9485 205.5849
C58/J both 516.565 49.5797 614.0992 419.0308
CAST/EiJ both 196.3111 50.7891 296.2246 96.3977
DBA/2J both 192.1313 52.2615 294.9413 89.3212
FVB/NJ both 358.5227 45.6694 448.3647 268.6808
MOLF/EiJ both 246.6786 54.0958 353.0971 140.26
NOD/ShiLtJ both 350.4833 42.6714 434.4274 266.5392
NZB/BlNJ both 466.0125 52.2615 568.8226 363.2024
PERA/EiJ both 150.2727 45.6694 240.1147 60.4308
PL/J both 374.5 47.708 468.3524 280.6476
SJL/J both 131.6025 49.5797 229.1367 34.0683
SM/J both 286.1652 46.3249 377.2966 195.0338
SPRET/EiJ both 260.55 85.3427 428.4382 92.6618
SWR/J both 326.4333 48.025 420.9093 231.9574




  GWAS USING LINEAR MIXED MODELS