Project measure / variable:   Wahlsten1   dist_ave_OFT

ID, description, units MPD:10833   dist_ave_OFT   average distance traveled in 1 min   [cm]  
Data set, strains Wahlsten1   inbred   21 strains     sex: both     age: 9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Wahlsten1 - average distance traveled in 1 min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested21 strains21 strains
Mean of the strain means479   cm 460   cm
Median of the strain means514   cm 498   cm
SD of the strain means± 151 ± 154
Coefficient of variation (CV)0.315 0.336
Min–max range of strain means193   –   740   cm 151   –   822   cm
Mean sample size per strain9.7   mice 9.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 64278.4627 64278.4627 4.5136 0.0343
strain 20 8779862.3583 438993.1179 30.8261 < 0.0001
sex:strain 20 326283.2228 16314.1611 1.1456 0.3008
Residuals 354 5041292.4102 14240.939


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 258.0 99.5   10 31.5 0.386 142.0, 406.0 -1.46
129S1/SvImJ m 229.0 64.9   10 20.5 0.283 96.7, 328.0 -1.5
A/J f 193.0 55.2   8 19.5 0.286 88.1, 268.0 -1.89
A/J m 151.0 72.1   9 24.0 0.478 49.6, 243.0 -2.0
AKR/J f 520.0 147.0   10 46.5 0.282 365.0, 798.0 0.27
AKR/J m 508.0 71.8   8 25.4 0.141 377.0, 622.0 0.31
BALB/cByJ f 498.0 46.7   10 14.8 0.0938 403.0, 561.0 0.13
BALB/cByJ m 498.0 236.0   10 74.5 0.473 291.0, 1142.0 0.25
BTBR T+ Itpr3tf/J f 540.0 144.0   12 41.6 0.267 239.0, 699.0 0.41
BTBR T+ Itpr3tf/J m 532.0 56.2   6 22.9 0.106 432.0, 587.0 0.47
C3H/HeJ f 270.0 27.2   10 8.59 0.101 235.0, 306.0 -1.38
C3H/HeJ m 256.0 46.8   8 16.5 0.183 204.0, 336.0 -1.32
C57BL/6J f 640.0 84.7   8 30.0 0.132 507.0, 781.0 1.07
C57BL/6J m 522.0 138.0   10 43.5 0.264 338.0, 829.0 0.4
C57L/J f 615.0 64.0   10 20.3 0.104 515.0, 716.0 0.9
C57L/J m 631.0 101.0   8 35.6 0.159 451.0, 755.0 1.11
C58/J f 713.0 311.0   10 98.4 0.436 248.0, 1256.0 1.55
C58/J m 623.0 151.0   10 47.7 0.242 367.0, 912.0 1.06
CAST/EiJ f 485.0 152.0   10 48.0 0.313 353.0, 868.0 0.04
CAST/EiJ m 456.0 98.9   9 33.0 0.217 276.0, 634.0 -0.03
DBA/2J f 341.0 94.0   10 29.7 0.275 156.0, 517.0 -0.91
DBA/2J m 360.0 128.0   8 45.3 0.356 71.6, 461.0 -0.65
FVB/NJ f 550.0 71.8   10 22.7 0.13 402.0, 675.0 0.47
FVB/NJ m 619.0 68.7   11 20.7 0.111 457.0, 712.0 1.03
MOLF/EiJ f 514.0 95.2   8 33.6 0.185 415.0, 651.0 0.23
MOLF/EiJ m 506.0 87.6   7 33.1 0.173 390.0, 630.0 0.3
NOD/ShiLtJ f 740.0 158.0   12 45.7 0.214 439.0, 1014.0 1.73
NOD/ShiLtJ m 822.0 129.0   12 37.3 0.157 649.0, 1128.0 2.35
NZB/BlNJ f 414.0 85.3   6 34.8 0.206 258.0, 515.0 -0.43
NZB/BlNJ m 398.0 116.0   12 33.4 0.291 188.0, 632.0 -0.4
PERA/EiJ f 378.0 80.9   10 25.6 0.214 273.0, 518.0 -0.67
PERA/EiJ m 303.0 113.0   12 32.5 0.372 199.0, 619.0 -1.02
PL/J f 583.0 151.0   12 43.6 0.259 401.0, 936.0 0.69
PL/J m 508.0 87.9   7 33.2 0.173 393.0, 630.0 0.31
SJL/J f 449.0 57.0   8 20.1 0.127 349.0, 515.0 -0.2
SJL/J m 392.0 86.6   12 25.0 0.221 256.0, 525.0 -0.44
SM/J f 550.0 74.4   14 19.9 0.135 409.0, 658.0 0.47
SM/J m 423.0 183.0   10 57.9 0.433 60.0, 740.0 -0.24
SPRET/EiJ f 262.0 89.8   7 33.9 0.343 130.0, 412.0 -1.44
SPRET/EiJ m 384.0 84.9   2   60.0 0.221 324.0, 444.0 -0.49
SWR/J f 540.0 65.1   10 20.6 0.121 469.0, 690.0 0.41
SWR/J m 540.0 63.2   10 20.0 0.117 443.0, 636.0 0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 257.6 37.7372 331.8172 183.3828
129S1/SvImJ m 229.17 37.7372 303.3872 154.9528
A/J f 192.7625 42.1914 275.7399 109.7851
A/J m 150.8444 39.7785 229.0763 72.6126
AKR/J f 520.4 37.7372 594.6172 446.1828
AKR/J m 508.25 42.1914 591.2274 425.2726
BALB/cByJ f 497.8 37.7372 572.0172 423.5828
BALB/cByJ m 498.2 37.7372 572.4172 423.9828
BTBR T+ Itpr3tf/J f 540.0 34.4492 607.7508 472.2492
BTBR T+ Itpr3tf/J m 532.1667 48.7185 627.9807 436.3526
C3H/HeJ f 270.2 37.7372 344.4172 195.9828
C3H/HeJ m 256.0 42.1914 338.9774 173.0226
C57BL/6J f 639.5 42.1914 722.4774 556.5226
C57BL/6J m 521.9 37.7372 596.1172 447.6828
C57L/J f 614.9 37.7372 689.1172 540.6828
C57L/J m 631.25 42.1914 714.2274 548.2726
C58/J f 713.3 37.7372 787.5172 639.0828
C58/J m 622.6 37.7372 696.8172 548.3828
CAST/EiJ f 485.0 37.7372 559.2172 410.7828
CAST/EiJ m 456.0 39.7785 534.2318 377.7682
DBA/2J f 341.4 37.7372 415.6172 267.1828
DBA/2J m 359.825 42.1914 442.8024 276.8476
FVB/NJ f 550.5 37.7372 624.7172 476.2828
FVB/NJ m 619.1818 35.981 689.9452 548.4185
MOLF/EiJ f 513.875 42.1914 596.8524 430.8976
MOLF/EiJ m 506.2857 45.1045 594.9923 417.5792
NOD/ShiLtJ f 739.6667 34.4492 807.4174 671.9159
NOD/ShiLtJ m 821.9167 34.4492 889.6674 754.1659
NZB/BlNJ f 414.0 48.7185 509.814 318.186
NZB/BlNJ m 397.5 34.4492 465.2508 329.7492
PERA/EiJ f 378.4 37.7372 452.6172 304.1828
PERA/EiJ m 302.6667 34.4492 370.4174 234.9159
PL/J f 582.75 34.4492 650.5008 514.9992
PL/J m 508.2857 45.1045 596.9923 419.5792
SJL/J f 448.75 42.1914 531.7274 365.7726
SJL/J m 391.5 34.4492 459.2508 323.7492
SM/J f 550.3571 31.8937 613.0822 487.6321
SM/J m 423.3 37.7372 497.5172 349.0828
SPRET/EiJ f 261.8571 45.1045 350.5637 173.1506
SPRET/EiJ m 384.0 84.3829 549.9548 218.0452
SWR/J f 540.0 37.7372 614.2172 465.7828
SWR/J m 540.4 37.7372 614.6172 466.1828


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 243.385 26.6842 295.8645 190.9055
A/J both 171.8035 28.9933 228.8242 114.7827
AKR/J both 514.325 28.3029 569.9879 458.6621
BALB/cByJ both 498.0 26.6842 550.4795 445.5205
BTBR T+ Itpr3tf/J both 536.0833 29.8339 594.7572 477.4095
C3H/HeJ both 263.1 28.3029 318.7629 207.4371
C57BL/6J both 580.7 28.3029 636.3629 525.0371
C57L/J both 623.075 28.3029 678.7379 567.4121
C58/J both 667.95 26.6842 720.4295 615.4705
CAST/EiJ both 470.5 27.4154 524.4176 416.5824
DBA/2J both 350.6125 28.3029 406.2754 294.9496
FVB/NJ both 584.8409 26.0707 636.1138 533.568
MOLF/EiJ both 510.0804 30.881 570.8136 449.3471
NOD/ShiLtJ both 780.7917 24.3592 828.6987 732.8846
NZB/BlNJ both 405.75 29.8339 464.4239 347.0761
PERA/EiJ both 340.5333 25.5482 390.7786 290.288
PL/J both 545.5179 28.3777 601.3278 489.7079
SJL/J both 420.125 27.2345 473.6867 366.5633
SM/J both 486.8286 24.7048 535.4152 438.242
SPRET/EiJ both 322.9286 47.8406 417.0161 228.8411
SWR/J both 540.2 26.6842 592.6795 487.7205




  GWAS USING LINEAR MIXED MODELS