Project measure / variable:   Deschepper1   kidney_bi

ID, description, units MPD:10427   kidney_bi   kidney weight   [mg]  both  
Data set, strains Deschepper1   inbred   13 strains     sex: both     age: 10wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Deschepper1 - kidney weight both



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains13 strains
Mean of the strain means264   mg 352   mg
Median of the strain means258   mg 360   mg
SD of the strain means± 34.4 ± 90.8
Coefficient of variation (CV)0.130 0.258
Min–max range of strain means222   –   333   mg 180   –   460   mg
Mean sample size per strain9.5   mice 9.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 506474.7217 506474.7217 495.7297 < 0.0001
strain 12 819611.1851 68300.9321 66.8519 < 0.0001
sex:strain 12 258768.1806 21564.0151 21.1065 < 0.0001
Residuals 226 230898.5912 1021.6752


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 234.0 11.5   9 3.82 0.0489 216.0, 252.0 -0.87
129S1/SvImJ m 360.0 36.9   11 11.1 0.102 292.0, 430.0 0.08
A/J f 228.0 19.4   10 6.14 0.0853 190.0, 258.0 -1.05
A/J m 310.0 28.5   10 9.0 0.0918 268.0, 372.0 -0.47
AKR/J f 309.0 25.2   10 7.98 0.0817 268.0, 347.0 1.3
AKR/J m 399.0 29.2   10 9.24 0.0733 360.0, 441.0 0.51
BALB/cByJ f 285.0 13.7   10 4.33 0.0481 263.0, 308.0 0.61
BALB/cByJ m 444.0 26.8   10 8.48 0.0604 404.0, 484.0 1.01
C3H/HeJ f 276.0 26.3   10 8.31 0.0951 233.0, 311.0 0.35
C3H/HeJ m 460.0 78.5   10 24.8 0.17 333.0, 568.0 1.19
C57BL/6J f 226.0 14.6   8 5.15 0.0645 202.0, 254.0 -1.11
C57BL/6J m 216.0 23.6   9 7.87 0.109 189.0, 257.0 -1.5
C57L/J f 333.0 35.7   10 11.3 0.107 288.0, 384.0 2.0
C57L/J m 440.0 40.0   10 12.6 0.0907 392.0, 495.0 0.97
CAST/EiJ f 222.0 31.9   9 10.6 0.143 181.0, 278.0 -1.22
CAST/EiJ m 180.0 18.7   9 6.23 0.104 156.0, 216.0 -1.9
CBA/J f 291.0 27.2   10 8.59 0.0933 252.0, 326.0 0.78
CBA/J m 433.0 39.0   10 12.3 0.0902 358.0, 485.0 0.89
DBA/2J f 258.0 35.2   10 11.1 0.136 207.0, 312.0 -0.18
DBA/2J m 349.0 44.7   10 14.1 0.128 264.0, 426.0 -0.04
FVB/NJ f 258.0 20.4   9 6.79 0.0789 226.0, 280.0 -0.18
FVB/NJ m 405.0 31.4   10 9.93 0.0775 336.0, 434.0 0.58
PWK/PhJ f 240.0 17.1   10 5.41 0.0714 215.0, 274.0 -0.7
PWK/PhJ m 257.0 22.8   10 7.2 0.0887 239.0, 315.0 -1.05
SJL/J f 273.0 30.5   8 10.8 0.112 246.0, 339.0 0.26
SJL/J m 327.0 21.0   10 6.66 0.0643 283.0, 357.0 -0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 234.3333 10.6546 255.3283 213.3384
129S1/SvImJ m 360.4545 9.6374 379.4452 341.4639
A/J f 227.5 10.1078 247.4176 207.5824
A/J m 310.0 10.1078 329.9176 290.0824
AKR/J f 308.9 10.1078 328.8176 288.9824
AKR/J m 398.8 10.1078 418.7176 378.8824
BALB/cByJ f 284.7 10.1078 304.6176 264.7824
BALB/cByJ m 444.1 10.1078 464.0176 424.1824
C3H/HeJ f 276.3 10.1078 296.2176 256.3824
C3H/HeJ m 460.5 10.1078 480.4176 440.5824
C57BL/6J f 226.0 11.3009 248.2685 203.7315
C57BL/6J m 216.4444 10.6546 237.4394 195.4495
C57L/J f 332.8 10.1078 352.7176 312.8824
C57L/J m 440.5 10.1078 460.4176 420.5824
CAST/EiJ f 222.4444 10.6546 243.4394 201.4495
CAST/EiJ m 179.8889 10.6546 200.8839 158.8939
CBA/J f 291.2 10.1078 311.1176 271.2824
CBA/J m 432.8 10.1078 452.7176 412.8824
DBA/2J f 258.4 10.1078 278.3176 238.4824
DBA/2J m 348.9 10.1078 368.8176 328.9824
FVB/NJ f 258.2222 10.6546 279.2172 237.2273
FVB/NJ m 405.4 10.1078 425.3176 385.4824
PWK/PhJ f 239.8 10.1078 259.7176 219.8824
PWK/PhJ m 257.0 10.1078 276.9176 237.0824
SJL/J f 272.875 11.3009 295.1435 250.6065
SJL/J m 327.1 10.1078 347.0176 307.1824


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 297.3939 7.1833 311.5487 283.2391
A/J both 268.75 7.1473 282.8339 254.6661
AKR/J both 353.85 7.1473 367.9339 339.7661
BALB/cByJ both 364.4 7.1473 378.4839 350.3161
C3H/HeJ both 368.4 7.1473 382.4839 354.3161
C57BL/6J both 221.2222 7.7658 236.5248 205.9196
C57L/J both 386.65 7.1473 400.7339 372.5661
CAST/EiJ both 201.1667 7.5339 216.0123 186.321
CBA/J both 362.0 7.1473 376.0839 347.9161
DBA/2J both 303.65 7.1473 317.7339 289.5661
FVB/NJ both 331.8111 7.3431 346.2809 317.3413
PWK/PhJ both 248.4 7.1473 262.4839 234.3161
SJL/J both 299.9875 7.5808 314.9257 285.0493




  GWAS USING LINEAR MIXED MODELS