Project measure / variable:   Deschepper1   kidney_L

ID, description, units MPD:10425   kidney_L   kidney weight   [mg]  left  
Data set, strains Deschepper1   inbred   13 strains     sex: both     age: 10wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Deschepper1 - kidney weight left



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains13 strains
Mean of the strain means129   mg 171   mg
Median of the strain means131   mg 175   mg
SD of the strain means± 16.5 ± 48.1
Coefficient of variation (CV)0.128 0.281
Min–max range of strain means106   –   160   mg 78.1   –   221   mg
Mean sample size per strain9.5   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 111997.3853 111997.3853 443.9311 < 0.0001
strain 12 228581.2472 19048.4373 75.5035 < 0.0001
sex:strain 12 73851.6862 6154.3072 24.3942 < 0.0001
Residuals 228 57521.0915 252.2855


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 115.0 7.02   9 2.34 0.0608 105.0, 125.0 -0.84
129S1/SvImJ m 174.0 20.4   12 5.89 0.117 134.0, 210.0 0.06
A/J f 111.0 10.4   10 3.3 0.094 92.0, 128.0 -1.08
A/J m 153.0 12.1   10 3.81 0.0787 134.0, 180.0 -0.37
AKR/J f 150.0 9.75   10 3.08 0.0649 138.0, 164.0 1.28
AKR/J m 193.0 16.5   10 5.21 0.0855 170.0, 215.0 0.46
BALB/cByJ f 139.0 7.35   10 2.32 0.0528 125.0, 150.0 0.61
BALB/cByJ m 220.0 13.5   10 4.27 0.0612 198.0, 235.0 1.02
C3H/HeJ f 132.0 12.4   10 3.92 0.0937 117.0, 148.0 0.19
C3H/HeJ m 221.0 33.7   10 10.6 0.152 165.0, 272.0 1.04
C57BL/6J f 106.0 11.5   8 4.06 0.108 91.1, 126.0 -1.38
C57BL/6J m 78.1 10.2   10 3.24 0.131 63.0, 97.0 -1.93
C57L/J f 160.0 18.7   10 5.93 0.117 137.0, 192.0 1.88
C57L/J m 217.0 19.5   10 6.16 0.0897 191.0, 247.0 0.96
CAST/EiJ f 109.0 14.5   9 4.83 0.132 89.0, 129.0 -1.2
CAST/EiJ m 89.8 10.3   9 3.43 0.115 78.0, 112.0 -1.69
CBA/J f 143.0 14.0   10 4.42 0.0977 125.0, 161.0 0.86
CBA/J m 216.0 21.8   10 6.89 0.101 186.0, 253.0 0.94
DBA/2J f 131.0 16.7   10 5.28 0.127 105.0, 159.0 0.13
DBA/2J m 175.0 22.1   10 7.0 0.127 131.0, 209.0 0.08
FVB/NJ f 130.0 7.65   9 2.55 0.0588 120.0, 140.0 0.07
FVB/NJ m 197.0 18.9   10 5.98 0.0959 153.0, 218.0 0.54
PWK/PhJ f 118.0 7.13   10 2.26 0.0606 107.0, 126.0 -0.66
PWK/PhJ m 128.0 15.0   10 4.75 0.118 117.0, 167.0 -0.89
SJL/J f 131.0 19.2   8 6.79 0.147 114.0, 175.0 0.13
SJL/J m 160.0 8.16   10 2.58 0.051 142.0, 172.0 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 115.3333 5.2945 125.7657 104.9009
129S1/SvImJ m 174.0 4.5852 183.0347 164.9653
A/J f 111.1 5.0228 120.997 101.203
A/J m 153.2 5.0228 163.097 143.303
AKR/J f 150.3 5.0228 160.197 140.403
AKR/J m 192.6 5.0228 202.497 182.703
BALB/cByJ f 139.3 5.0228 149.197 129.403
BALB/cByJ m 220.3 5.0228 230.197 210.403
C3H/HeJ f 132.2 5.0228 142.097 122.303
C3H/HeJ m 221.2 5.0228 231.097 211.303
C57BL/6J f 106.1625 5.6157 117.2277 95.0973
C57BL/6J m 78.1 5.0228 87.997 68.203
C57L/J f 159.5 5.0228 169.397 149.603
C57L/J m 217.1 5.0228 226.997 207.203
CAST/EiJ f 109.4444 5.2945 119.8768 99.012
CAST/EiJ m 89.7778 5.2945 100.2102 79.3454
CBA/J f 143.0 5.0228 152.897 133.103
CBA/J m 216.2 5.0228 226.097 206.303
DBA/2J f 131.4 5.0228 141.297 121.503
DBA/2J m 174.6 5.0228 184.497 164.703
FVB/NJ f 130.0 5.2945 140.4324 119.5676
FVB/NJ m 197.0 5.0228 206.897 187.103
PWK/PhJ f 117.7 5.0228 127.597 107.803
PWK/PhJ m 127.7 5.0228 137.597 117.803
SJL/J f 130.875 5.6157 141.9402 119.8098
SJL/J m 159.9 5.0228 169.797 150.003


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 144.6667 3.502 151.5671 137.7663
A/J both 132.15 3.5517 139.1483 125.1517
AKR/J both 171.45 3.5517 178.4483 164.4517
BALB/cByJ both 179.8 3.5517 186.7983 172.8017
C3H/HeJ both 176.7 3.5517 183.6983 169.7017
C57BL/6J both 92.1312 3.7671 99.554 84.7085
C57L/J both 188.3 3.5517 195.2983 181.3017
CAST/EiJ both 99.6111 3.7438 106.9879 92.2343
CBA/J both 179.6 3.5517 186.5983 172.6017
DBA/2J both 153.0 3.5517 159.9983 146.0017
FVB/NJ both 163.5 3.649 170.69 156.31
PWK/PhJ both 122.7 3.5517 129.6983 115.7017
SJL/J both 145.3875 3.7671 152.8103 137.9647




  GWAS USING LINEAR MIXED MODELS