Project measure / variable:   Deschepper1   kidney_R

ID, description, units MPD:10423   kidney_R   kidney weight   [mg]  right  
Data set, strains Deschepper1   inbred   13 strains     sex: both     age: 10wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Deschepper1 - kidney weight right



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains13 strains
Mean of the strain means135   mg 181   mg
Median of the strain means128   mg 183   mg
SD of the strain means± 18.3 ± 44.0
Coefficient of variation (CV)0.136 0.243
Min–max range of strain means113   –   173   mg 90.1   –   239   mg
Mean sample size per strain9.5   mice 9.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 136260.2478 136260.2478 412.492 < 0.0001
strain 12 200638.8778 16719.9065 50.6151 < 0.0001
sex:strain 12 61552.1242 5129.3437 15.5277 < 0.0001
Residuals 226 74655.5558 330.3343


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 119.0 7.23   9 2.41 0.0607 111.0, 133.0 -0.88
129S1/SvImJ m 183.0 20.2   11 6.1 0.111 146.0, 220.0 0.05
A/J f 116.0 9.48   10 3.0 0.0814 98.0, 130.0 -1.04
A/J m 157.0 17.0   10 5.37 0.108 134.0, 192.0 -0.55
AKR/J f 159.0 16.7   10 5.28 0.105 128.0, 183.0 1.31
AKR/J m 206.0 16.5   10 5.22 0.0801 185.0, 229.0 0.57
BALB/cByJ f 145.0 8.05   10 2.55 0.0555 133.0, 158.0 0.54
BALB/cByJ m 224.0 15.1   10 4.78 0.0676 206.0, 249.0 0.98
C3H/HeJ f 144.0 14.3   10 4.54 0.0996 116.0, 163.0 0.49
C3H/HeJ m 239.0 46.1   10 14.6 0.193 168.0, 296.0 1.32
C57BL/6J f 120.0 7.81   8 2.76 0.0651 110.0, 130.0 -0.82
C57BL/6J m 137.0 18.8   9 6.25 0.137 121.0, 173.0 -1.0
C57L/J f 173.0 20.7   10 6.54 0.119 140.0, 200.0 2.07
C57L/J m 223.0 22.8   10 7.2 0.102 194.0, 259.0 0.95
CAST/EiJ f 113.0 18.1   9 6.03 0.16 92.0, 149.0 -1.21
CAST/EiJ m 90.1 9.17   9 3.06 0.102 78.0, 106.0 -2.06
CBA/J f 148.0 16.5   10 5.22 0.111 125.0, 172.0 0.71
CBA/J m 216.0 19.4   10 6.13 0.0896 172.0, 240.0 0.79
DBA/2J f 127.0 19.5   10 6.17 0.154 102.0, 160.0 -0.44
DBA/2J m 174.0 23.6   10 7.46 0.135 133.0, 217.0 -0.16
FVB/NJ f 128.0 13.0   9 4.34 0.102 106.0, 141.0 -0.39
FVB/NJ m 208.0 14.3   10 4.52 0.0685 183.0, 228.0 0.61
PWK/PhJ f 122.0 13.9   10 4.39 0.114 105.0, 148.0 -0.71
PWK/PhJ m 129.0 8.81   10 2.79 0.0681 119.0, 148.0 -1.18
SJL/J f 142.0 13.3   8 4.69 0.0935 128.0, 164.0 0.38
SJL/J m 167.0 14.9   10 4.71 0.0891 141.0, 190.0 -0.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 119.0 6.0584 130.9381 107.0619
129S1/SvImJ m 182.8182 5.48 193.6166 172.0198
A/J f 116.4 5.7475 127.7255 105.0745
A/J m 156.8 5.7475 168.1255 145.4745
AKR/J f 158.6 5.7475 169.9255 147.2745
AKR/J m 206.2 5.7475 217.5255 194.8745
BALB/cByJ f 145.2 5.7475 156.5255 133.8745
BALB/cByJ m 223.6 5.7475 234.9255 212.2745
C3H/HeJ f 144.1 5.7475 155.4255 132.7745
C3H/HeJ m 239.3 5.7475 250.6255 227.9745
C57BL/6J f 119.875 6.4259 132.5373 107.2127
C57BL/6J m 136.6667 6.0584 148.6048 124.7286
C57L/J f 173.3 5.7475 184.6255 161.9745
C57L/J m 223.4 5.7475 234.7255 212.0745
CAST/EiJ f 113.0 6.0584 124.9381 101.0619
CAST/EiJ m 90.1111 6.0584 102.0492 78.173
CBA/J f 148.2 5.7475 159.5255 136.8745
CBA/J m 216.4 5.7475 227.7255 205.0745
DBA/2J f 127.0 5.7475 138.3255 115.6745
DBA/2J m 174.3 5.7475 185.6255 162.9745
FVB/NJ f 128.2222 6.0584 140.1603 116.2841
FVB/NJ m 208.4 5.7475 219.7255 197.0745
PWK/PhJ f 122.1 5.7475 133.4255 110.7745
PWK/PhJ m 129.3 5.7475 140.6255 117.9745
SJL/J f 142.0 6.4259 154.6623 129.3377
SJL/J m 167.2 5.7475 178.5255 155.8745


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 150.9091 4.0846 158.9578 142.8604
A/J both 136.6 4.0641 144.6083 128.5917
AKR/J both 182.4 4.0641 190.4083 174.3917
BALB/cByJ both 184.4 4.0641 192.4083 176.3917
C3H/HeJ both 191.7 4.0641 199.7083 183.6917
C57BL/6J both 128.2708 4.4158 136.9722 119.5695
C57L/J both 198.35 4.0641 206.3583 190.3417
CAST/EiJ both 101.5556 4.2839 109.9971 93.114
CBA/J both 182.3 4.0641 190.3083 174.2917
DBA/2J both 150.65 4.0641 158.6583 142.6417
FVB/NJ both 168.3111 4.1754 176.5389 160.0833
PWK/PhJ both 125.7 4.0641 133.7083 117.6917
SJL/J both 154.6 4.3106 163.0941 146.1059




  GWAS USING LINEAR MIXED MODELS