Project measure / variable:   Tordoff3   total_wt

ID, description, units MPD:10330   total_wt   total weight (lean + fat), head excluded   [g]  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 14-18wks
Procedure DXA
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  STRAIN COMPARISON PLOT
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Tordoff3 - total weight (lean + fat), head excluded



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means20.1   g 26.3   g
Median of the strain means20.3   g 27.0   g
SD of the strain means± 5.92 ± 7.18
Coefficient of variation (CV)0.295 0.273
Min–max range of strain means10.1   –   40.4   g 12.2   –   46.8   g
Mean sample size per strain9.7   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7894.3513 7894.3513 801.5402 < 0.0001
strain 39 30994.3881 794.7279 80.6914 < 0.0001
sex:strain 39 2217.553 56.8603 5.7732 < 0.0001
Residuals 707 6963.2271 9.849


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 19.5 1.74   10 0.549 0.0891 16.7, 22.0 -0.1
129S1/SvImJ m 24.7 1.28   9 0.428 0.0519 22.9, 26.6 -0.22
A/J f 20.8 1.64   10 0.518 0.0786 19.1, 24.4 0.12
A/J m 24.8 3.1   10 0.979 0.125 19.9, 29.5 -0.21
AKR/J f 23.7 5.34   9 1.78 0.225 15.2, 33.4 0.61
AKR/J m 34.8 4.95   10 1.56 0.142 28.0, 46.2 1.18
BALB/cByJ f 22.2 2.03   9 0.676 0.0915 20.0, 26.8 0.35
BALB/cByJ m 28.6 2.17   10 0.685 0.0758 25.7, 32.6 0.32
BTBR T+ Itpr3tf/J f 26.1 1.75   10 0.555 0.0671 22.6, 28.4 1.01
BTBR T+ Itpr3tf/J m 33.0 3.66   10 1.16 0.111 27.8, 38.9 0.93
BUB/BnJ f 26.5 1.05   10 0.332 0.0397 24.3, 27.8 1.08
BUB/BnJ m 32.6 2.61   9 0.868 0.0799 29.4, 37.9 0.88
C3H/HeJ f 20.8 2.08   10 0.659 0.1 17.4, 23.8 0.12
C3H/HeJ m 28.3 2.3   10 0.727 0.0813 25.9, 32.6 0.28
C57BL/10J f 21.6 1.13   10 0.358 0.0525 19.5, 23.1 0.25
C57BL/10J m 30.9 2.91   10 0.921 0.0941 25.2, 36.4 0.64
C57BL/6J f 20.1 2.04   9 0.681 0.102 18.2, 24.2 0.0
C57BL/6J m 27.3 2.97   9 0.99 0.109 24.0, 33.4 0.14
C57BLKS/J f 19.6 1.32   10 0.416 0.0673 17.2, 21.5 -0.09
C57BLKS/J m 25.9 2.53   8 0.896 0.0979 22.1, 28.7 -0.05
C57BR/cdJ f 21.6 1.76   15 0.453 0.0811 19.0, 25.0 0.25
C57BR/cdJ m 31.3 4.53   13 1.26 0.145 23.9, 38.7 0.7
C57L/J f 20.9 1.03   10 0.327 0.0495 19.1, 22.5 0.13
C57L/J m 28.8 3.73   10 1.18 0.129 22.1, 34.0 0.35
C58/J f 20.4 1.53   9 0.51 0.0751 18.4, 22.6 0.05
C58/J m 23.4 1.6   9 0.534 0.0686 20.9, 26.3 -0.4
CAST/EiJ f 11.1 0.727   10 0.23 0.0656 10.1, 12.2 -1.52
CAST/EiJ m 13.8 0.561   10 0.178 0.0407 13.0, 14.5 -1.74
CBA/J f 22.5 2.21   10 0.698 0.0982 20.1, 26.8 0.4
CBA/J m 35.3 3.07   10 0.97 0.0868 29.9, 40.3 1.25
CE/J f 15.4 3.9   9 1.3 0.253 10.0, 20.9 -0.79
CE/J m 20.4 2.97   8 1.05 0.146 15.9, 23.4 -0.82
CZECHII/EiJ f 11.5 1.6   9 0.533 0.139 9.7, 13.6 -1.45
CZECHII/EiJ m 14.6 1.61   10 0.508 0.11 12.3, 17.2 -1.63
DBA/2J f 20.8 1.57   10 0.496 0.0754 17.7, 22.9 0.12
DBA/2J m 28.5 3.25   10 1.03 0.114 25.8, 36.0 0.31
FVB/NJ f 17.7 1.98   10 0.626 0.112 14.9, 21.5 -0.41
FVB/NJ m 25.0 2.18   10 0.688 0.0871 21.6, 28.9 -0.18
I/LnJ f 17.1 1.01   10 0.318 0.0589 15.6, 18.4 -0.51
I/LnJ m 24.2 4.49   10 1.42 0.186 18.7, 34.8 -0.29
JF1/MsJ f 14.7 2.32   10 0.734 0.158 12.7, 19.4 -0.91
JF1/MsJ m 26.6 5.36   10 1.69 0.201 15.8, 31.4 0.04
KK/HlJ f 40.4 2.28   10 0.72 0.0564 37.5, 43.9 3.43
KK/HlJ m 38.2 4.58   10 1.45 0.12 26.4, 43.2 1.66
LP/J f 19.1 1.05   10 0.332 0.055 17.9, 21.1 -0.17
LP/J m 29.5 4.81   10 1.52 0.163 22.9, 39.8 0.45
MA/MyJ f 20.8 1.85   8 0.655 0.0893 18.8, 24.3 0.12
MA/MyJ m 29.1 3.51   15 0.907 0.121 21.7, 34.7 0.39
MOLF/EiJ f 11.5 0.696   9 0.232 0.0604 10.6, 12.6 -1.45
MOLF/EiJ m 13.4 0.596   10 0.188 0.0445 12.3, 14.2 -1.79
MSM/MsJ f 10.1 0.506   10 0.16 0.0499 9.3, 11.2 -1.69
MSM/MsJ m 12.2 0.754   10 0.239 0.0617 11.0, 13.5 -1.96
NOD/ShiLtJ f 20.7 2.9   8 1.02 0.14 13.8, 23.0 0.1
NOD/ShiLtJ m 28.3 2.32   10 0.734 0.082 25.1, 30.8 0.28
NON/ShiLtJ f 32.6 4.86   10 1.54 0.149 25.7, 42.5 2.11
NON/ShiLtJ m 46.8 4.3   10 1.36 0.0918 37.6, 53.2 2.86
NZB/BlNJ f 27.1 3.8   10 1.2 0.14 21.4, 34.0 1.18
NZB/BlNJ m 33.3 5.84   10 1.85 0.175 26.6, 42.5 0.98
NZW/LacJ f 29.3 2.29   10 0.724 0.078 25.5, 33.0 1.55
NZW/LacJ m 30.8 2.48   10 0.783 0.0803 26.7, 34.0 0.63
PERA/EiJ f 20.2 3.54   10 1.12 0.175 15.7, 24.9 0.02
PERA/EiJ m 24.8 2.01   10 0.637 0.0812 22.9, 28.6 -0.21
PL/J f 17.5 0.808   10 0.256 0.0461 16.3, 18.8 -0.44
PL/J m 25.9 2.47   10 0.782 0.0953 20.7, 28.6 -0.05
PWK/PhJ f 15.0 1.17   10 0.37 0.0781 13.3, 17.0 -0.86
PWK/PhJ m 16.3 2.03   10 0.64 0.124 13.1, 20.0 -1.39
RIIIS/J f 24.7 10.7   10 3.38 0.432 14.4, 41.7 0.78
RIIIS/J m 30.1 9.0   10 2.85 0.299 18.3, 40.8 0.53
SEA/GnJ f 21.2 1.25   10 0.394 0.0588 19.2, 23.2 0.18
SEA/GnJ m 27.5 3.47   10 1.1 0.126 20.7, 32.1 0.17
SJL/J f 19.0 1.57   10 0.498 0.0828 17.1, 21.9 -0.19
SJL/J m 25.9 2.54   10 0.803 0.0982 23.4, 31.5 -0.05
SM/J f 15.6 3.41   10 1.08 0.219 9.2, 19.2 -0.76
SM/J m 20.8 2.51   10 0.793 0.12 18.0, 25.6 -0.76
SPRET/EiJ f 14.0 1.15   9 0.384 0.0825 12.2, 16.0 -1.03
SPRET/EiJ m 18.4 1.39   5 0.622 0.0754 17.5, 20.9 -1.1
SWR/J f 17.0 2.53   10 0.8 0.149 15.2, 23.4 -0.52
SWR/J m 21.5 1.49   9 0.495 0.069 19.4, 23.9 -0.67
WSB/EiJ f 13.9 1.82   10 0.575 0.131 12.2, 18.1 -1.05
WSB/EiJ m 16.0 1.69   10 0.534 0.105 13.3, 19.7 -1.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 19.49 0.9924 21.4384 17.5416
129S1/SvImJ m 24.7222 1.0461 26.7761 22.6684
A/J f 20.81 0.9924 22.7584 18.8616
A/J m 24.82 0.9924 26.7684 22.8716
AKR/J f 23.7111 1.0461 25.765 21.6573
AKR/J m 34.79 0.9924 36.7384 32.8416
BALB/cByJ f 22.1667 1.0461 24.2205 20.1128
BALB/cByJ m 28.58 0.9924 30.5284 26.6316
BTBR T+ Itpr3tf/J f 26.14 0.9924 28.0884 24.1916
BTBR T+ Itpr3tf/J m 33.04 0.9924 34.9884 31.0916
BUB/BnJ f 26.48 0.9924 28.4284 24.5316
BUB/BnJ m 32.6111 1.0461 34.665 30.5573
C3H/HeJ f 20.8 0.9924 22.7484 18.8516
C3H/HeJ m 28.26 0.9924 30.2084 26.3116
C57BL/10J f 21.55 0.9924 23.4984 19.6016
C57BL/10J m 30.95 0.9924 32.8984 29.0016
C57BL/6J f 20.0556 1.0461 22.1094 18.0017
C57BL/6J m 27.2889 1.0461 29.3427 25.235
C57BLKS/J f 19.56 0.9924 21.5084 17.6116
C57BLKS/J m 25.9 1.1096 28.0784 23.7216
C57BR/cdJ f 21.6333 0.8103 23.2242 20.0424
C57BR/cdJ m 31.3154 0.8704 33.0243 29.6065
C57L/J f 20.91 0.9924 22.8584 18.9616
C57L/J m 28.77 0.9924 30.7184 26.8216
C58/J f 20.3667 1.0461 22.4205 18.3128
C58/J m 23.3778 1.0461 25.4316 21.3239
CAST/EiJ f 11.08 0.9924 13.0284 9.1316
CAST/EiJ m 13.78 0.9924 15.7284 11.8316
CBA/J f 22.47 0.9924 24.4184 20.5216
CBA/J m 35.34 0.9924 37.2884 33.3916
CE/J f 15.4333 1.0461 17.4872 13.3795
CE/J m 20.3625 1.1096 22.5409 18.1841
CZECHII/EiJ f 11.4778 1.0461 13.5316 9.4239
CZECHII/EiJ m 14.6 0.9924 16.5484 12.6516
DBA/2J f 20.81 0.9924 22.7584 18.8616
DBA/2J m 28.55 0.9924 30.4984 26.6016
FVB/NJ f 17.74 0.9924 19.6884 15.7916
FVB/NJ m 24.97 0.9924 26.9184 23.0216
I/LnJ f 17.09 0.9924 19.0384 15.1416
I/LnJ m 24.17 0.9924 26.1184 22.2216
JF1/MsJ f 14.71 0.9924 16.6584 12.7616
JF1/MsJ m 26.6 0.9924 28.5484 24.6516
KK/HlJ f 40.36 0.9924 42.3084 38.4116
KK/HlJ m 38.18 0.9924 40.1284 36.2316
LP/J f 19.06 0.9924 21.0084 17.1116
LP/J m 29.51 0.9924 31.4584 27.5616
MA/MyJ f 20.75 1.1096 22.9284 18.5716
MA/MyJ m 29.0533 0.8103 30.6442 27.4624
MOLF/EiJ f 11.5333 1.0461 13.5872 9.4795
MOLF/EiJ m 13.38 0.9924 15.3284 11.4316
MSM/MsJ f 10.14 0.9924 12.0884 8.1916
MSM/MsJ m 12.23 0.9924 14.1784 10.2816
NOD/ShiLtJ f 20.65 1.1096 22.8284 18.4716
NOD/ShiLtJ m 28.28 0.9924 30.2284 26.3316
NON/ShiLtJ f 32.6 0.9924 34.5484 30.6516
NON/ShiLtJ m 46.82 0.9924 48.7684 44.8716
NZB/BlNJ f 27.11 0.9924 29.0584 25.1616
NZB/BlNJ m 33.32 0.9924 35.2684 31.3716
NZW/LacJ f 29.32 0.9924 31.2684 27.3716
NZW/LacJ m 30.84 0.9924 32.7884 28.8916
PERA/EiJ f 20.2 0.9924 22.1484 18.2516
PERA/EiJ m 24.81 0.9924 26.7584 22.8616
PL/J f 17.53 0.9924 19.4784 15.5816
PL/J m 25.94 0.9924 27.8884 23.9916
PWK/PhJ f 14.98 0.9924 16.9284 13.0316
PWK/PhJ m 16.32 0.9924 18.2684 14.3716
RIIIS/J f 24.71 0.9924 26.6584 22.7616
RIIIS/J m 30.08 0.9924 32.0284 28.1316
SEA/GnJ f 21.2 0.9924 23.1484 19.2516
SEA/GnJ m 27.52 0.9924 29.4684 25.5716
SJL/J f 19.01 0.9924 20.9584 17.0616
SJL/J m 25.87 0.9924 27.8184 23.9216
SM/J f 15.61 0.9924 17.5584 13.6616
SM/J m 20.84 0.9924 22.7884 18.8916
SPRET/EiJ f 13.9667 1.0461 16.0205 11.9128
SPRET/EiJ m 18.44 1.4035 21.1955 15.6845
SWR/J f 16.96 0.9924 18.9084 15.0116
SWR/J m 21.5444 1.0461 23.5983 19.4906
WSB/EiJ f 13.88 0.9924 15.8284 11.9316
WSB/EiJ m 16.04 0.9924 17.9884 14.0916


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 22.1061 0.721 23.5216 20.6906
A/J both 22.815 0.7017 24.1928 21.4372
AKR/J both 29.2506 0.721 30.6661 27.835
BALB/cByJ both 25.3733 0.721 26.7888 23.9578
BTBR T+ Itpr3tf/J both 29.59 0.7017 30.9678 28.2122
BUB/BnJ both 29.5456 0.721 30.9611 28.13
C3H/HeJ both 24.53 0.7017 25.9078 23.1522
C57BL/10J both 26.25 0.7017 27.6278 24.8722
C57BL/6J both 23.6722 0.7397 25.1245 22.2199
C57BLKS/J both 22.73 0.7443 24.1913 21.2687
C57BR/cdJ both 26.4744 0.5946 27.6418 25.307
C57L/J both 24.84 0.7017 26.2178 23.4622
C58/J both 21.8722 0.7397 23.3245 20.4199
CAST/EiJ both 12.43 0.7017 13.8078 11.0522
CBA/J both 28.905 0.7017 30.2828 27.5272
CE/J both 17.8979 0.7625 19.3949 16.4009
CZECHII/EiJ both 13.0389 0.721 14.4544 11.6234
DBA/2J both 24.68 0.7017 26.0578 23.3022
FVB/NJ both 21.355 0.7017 22.7328 19.9772
I/LnJ both 20.63 0.7017 22.0078 19.2522
JF1/MsJ both 20.655 0.7017 22.0328 19.2772
KK/HlJ both 39.27 0.7017 40.6478 37.8922
LP/J both 24.285 0.7017 25.6628 22.9072
MA/MyJ both 24.9017 0.687 26.2504 23.5529
MOLF/EiJ both 12.4567 0.721 13.8722 11.0412
MSM/MsJ both 11.185 0.7017 12.5628 9.8072
NOD/ShiLtJ both 24.465 0.7443 25.9263 23.0037
NON/ShiLtJ both 39.71 0.7017 41.0878 38.3322
NZB/BlNJ both 30.215 0.7017 31.5928 28.8372
NZW/LacJ both 30.08 0.7017 31.4578 28.7022
PERA/EiJ both 22.505 0.7017 23.8828 21.1272
PL/J both 21.735 0.7017 23.1128 20.3572
PWK/PhJ both 15.65 0.7017 17.0278 14.2722
RIIIS/J both 27.395 0.7017 28.7728 26.0172
SEA/GnJ both 24.36 0.7017 25.7378 22.9822
SJL/J both 22.44 0.7017 23.8178 21.0622
SM/J both 18.225 0.7017 19.6028 16.8472
SPRET/EiJ both 16.2033 0.8752 17.9217 14.485
SWR/J both 19.2522 0.721 20.6677 17.8367
WSB/EiJ both 14.96 0.7017 16.3378 13.5822




  GWAS USING LINEAR MIXED MODELS