Project measure / variable:   Tordoff3   ionized_Ca

ID, description, units MPD:10321   ionized_Ca   blood ionized calcium   [mg/dL]  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 13-15wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Tordoff3 - blood ionized calcium



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means4.94   mg/dL 4.96   mg/dL
Median of the strain means4.90   mg/dL 4.94   mg/dL
SD of the strain means± 0.123 ± 0.132
Coefficient of variation (CV)0.0249 0.0266
Min–max range of strain means4.74   –   5.22   mg/dL 4.65   –   5.36   mg/dL
Mean sample size per strain9.8   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0749 0.0749 1.4731 0.2253
strain 39 9.3255 0.2391 4.7059 < 0.0001
sex:strain 39 3.2538 0.0834 1.642 0.009
Residuals 708 35.9749 0.0508


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4.8 0.175   10 0.0554 0.0365 4.56, 5.04 -1.13
129S1/SvImJ m 4.9 0.233   9 0.0778 0.0476 4.52, 5.16 -0.45
A/J f 4.9 0.208   10 0.0659 0.0425 4.56, 5.24 -0.32
A/J m 5.02 0.258   10 0.0816 0.0514 4.64, 5.28 0.46
AKR/J f 5.0 0.174   9 0.0581 0.0349 4.68, 5.2 0.5
AKR/J m 4.89 0.148   10 0.0469 0.0303 4.52, 5.04 -0.52
BALB/cByJ f 5.04 0.214   9 0.0713 0.0424 4.72, 5.4 0.82
BALB/cByJ m 5.02 0.242   10 0.0764 0.0482 4.56, 5.28 0.46
BTBR T+ Itpr3tf/J f 5.19 0.182   10 0.0575 0.0351 4.92, 5.52 2.04
BTBR T+ Itpr3tf/J m 4.92 0.196   10 0.0621 0.0399 4.64, 5.32 -0.29
BUB/BnJ f 5.01 0.285   10 0.09 0.0568 4.56, 5.44 0.58
BUB/BnJ m 4.91 0.217   9 0.0724 0.0443 4.6, 5.16 -0.37
C3H/HeJ f 5.04 0.16   10 0.0506 0.0317 4.76, 5.28 0.82
C3H/HeJ m 4.97 0.18   10 0.0568 0.0362 4.68, 5.2 0.09
C57BL/10J f 4.83 0.228   10 0.0722 0.0473 4.52, 5.12 -0.88
C57BL/10J m 5.17 0.0823   10 0.026 0.0159 5.04, 5.32 1.6
C57BL/6J f 4.84 0.26   9 0.0865 0.0537 4.4, 5.28 -0.8
C57BL/6J m 4.92 0.261   9 0.087 0.053 4.52, 5.24 -0.29
C57BLKS/J f 4.88 0.258   10 0.0816 0.0529 4.4, 5.32 -0.48
C57BLKS/J m 5.0 0.0583   8 0.0206 0.0117 4.92, 5.12 0.31
C57BR/cdJ f 4.92 0.258   15 0.0666 0.0524 4.48, 5.32 -0.15
C57BR/cdJ m 4.86 0.324   13 0.0898 0.0666 4.16, 5.28 -0.75
C57L/J f 4.8 0.401   10 0.127 0.0835 4.0, 5.24 -1.13
C57L/J m 4.74 0.166   10 0.0524 0.0349 4.52, 5.04 -1.66
C58/J f 4.8 0.378   9 0.126 0.0787 4.24, 5.24 -1.13
C58/J m 5.0 0.152   9 0.0505 0.0303 4.84, 5.32 0.31
CAST/EiJ f 4.79 0.174   10 0.0549 0.0362 4.56, 5.04 -1.21
CAST/EiJ m 5.0 0.186   10 0.0589 0.0372 4.76, 5.32 0.31
CBA/J f 5.02 0.246   10 0.0778 0.049 4.52, 5.32 0.66
CBA/J m 4.89 0.213   10 0.0675 0.0436 4.48, 5.2 -0.52
CE/J f 5.17 0.152   9 0.0508 0.0294 4.92, 5.4 1.88
CE/J m 5.0 0.218   8 0.0771 0.0436 4.64, 5.4 0.31
CZECHII/EiJ f 4.88 0.241   9 0.0804 0.0495 4.56, 5.24 -0.48
CZECHII/EiJ m 5.05 0.279   10 0.0882 0.0553 4.64, 5.44 0.69
DBA/2J f 5.08 0.226   10 0.0716 0.0445 4.88, 5.4 1.15
DBA/2J m 5.16 0.171   10 0.054 0.0331 4.96, 5.44 1.53
FVB/NJ f 4.87 0.148   10 0.0469 0.0304 4.64, 5.16 -0.56
FVB/NJ m 4.83 0.154   10 0.0488 0.032 4.56, 5.0 -0.98
I/LnJ f 4.87 0.142   10 0.0449 0.0292 4.64, 5.08 -0.56
I/LnJ m 5.04 0.142   10 0.0448 0.0281 4.72, 5.28 0.62
JF1/MsJ f 5.14 0.189   10 0.0597 0.0367 4.88, 5.44 1.64
JF1/MsJ m 4.94 0.245   10 0.0773 0.0495 4.52, 5.32 -0.14
KK/HlJ f 5.02 0.315   10 0.0995 0.0627 4.16, 5.2 0.66
KK/HlJ m 5.2 0.171   10 0.054 0.0328 4.96, 5.56 1.83
LP/J f 4.89 0.236   10 0.0747 0.0483 4.52, 5.28 -0.4
LP/J m 4.94 0.183   10 0.0579 0.0371 4.56, 5.16 -0.14
MA/MyJ f 5.01 0.145   8 0.0511 0.0289 4.8, 5.28 0.58
MA/MyJ m 4.91 0.17   15 0.044 0.0346 4.52, 5.16 -0.37
MOLF/EiJ f 5.01 0.338   9 0.113 0.0673 4.28, 5.4 0.58
MOLF/EiJ m 5.04 0.205   10 0.0649 0.0408 4.72, 5.32 0.62
MSM/MsJ f 4.81 0.11   10 0.0348 0.0229 4.6, 5.0 -1.05
MSM/MsJ m 4.65 0.154   10 0.0488 0.0332 4.4, 4.88 -2.34
NOD/ShiLtJ f 4.96 0.198   9 0.0661 0.04 4.64, 5.16 0.17
NOD/ShiLtJ m 4.92 0.243   10 0.0769 0.0495 4.32, 5.16 -0.29
NON/ShiLtJ f 5.22 0.171   10 0.0541 0.0327 4.96, 5.4 2.29
NON/ShiLtJ m 5.36 0.165   10 0.0521 0.0307 5.12, 5.64 3.04
NZB/BlNJ f 4.82 0.269   10 0.0852 0.0559 4.4, 5.12 -0.97
NZB/BlNJ m 4.9 0.218   10 0.0691 0.0446 4.48, 5.16 -0.45
NZW/LacJ f 5.06 0.208   10 0.0656 0.041 4.72, 5.36 0.99
NZW/LacJ m 5.15 0.27   10 0.0853 0.0524 4.68, 5.44 1.45
PERA/EiJ f 4.84 0.222   10 0.0702 0.0458 4.48, 5.12 -0.8
PERA/EiJ m 4.86 0.242   10 0.0764 0.0498 4.56, 5.28 -0.75
PL/J f 4.82 0.304   10 0.096 0.0629 4.2, 5.24 -0.97
PL/J m 4.9 0.233   10 0.0736 0.0475 4.56, 5.2 -0.45
PWK/PhJ f 4.87 0.253   10 0.08 0.0519 4.52, 5.24 -0.56
PWK/PhJ m 4.78 0.236   10 0.0745 0.0493 4.44, 5.12 -1.36
RIIIS/J f 4.74 0.281   10 0.0889 0.0593 4.32, 5.24 -1.62
RIIIS/J m 4.9 0.13   10 0.041 0.0264 4.76, 5.12 -0.45
SEA/GnJ f 5.08 0.253   10 0.08 0.0498 4.6, 5.56 1.15
SEA/GnJ m 5.03 0.171   10 0.0539 0.0339 4.8, 5.28 0.54
SJL/J f 4.9 0.269   10 0.085 0.0548 4.44, 5.44 -0.32
SJL/J m 4.97 0.36   10 0.114 0.0725 4.28, 5.48 0.09
SM/J f 4.83 0.19   10 0.0602 0.0395 4.44, 5.16 -0.88
SM/J m 4.76 0.137   10 0.0432 0.0287 4.56, 5.08 -1.51
SPRET/EiJ f 4.88 0.286   9 0.0953 0.0585 4.4, 5.24 -0.48
SPRET/EiJ m 4.86 0.156   5 0.07 0.0322 4.72, 5.12 -0.75
SWR/J f 5.02 0.215   10 0.068 0.0429 4.68, 5.32 0.66
SWR/J m 4.99 0.175   9 0.0585 0.0352 4.56, 5.16 0.24
WSB/EiJ f 4.9 0.212   10 0.067 0.0432 4.48, 5.2 -0.32
WSB/EiJ m 5.0 0.306   10 0.0968 0.0612 4.48, 5.6 0.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4.804 0.0713 4.944 4.664
129S1/SvImJ m 4.9022 0.0751 5.0497 4.7547
A/J f 4.904 0.0713 5.044 4.764
A/J m 5.02 0.0713 5.16 4.88
AKR/J f 5.0 0.0751 5.1475 4.8525
AKR/J m 4.888 0.0713 5.028 4.748
BALB/cByJ f 5.0444 0.0751 5.192 4.8969
BALB/cByJ m 5.016 0.0713 5.156 4.876
BTBR T+ Itpr3tf/J f 5.188 0.0713 5.328 5.048
BTBR T+ Itpr3tf/J m 4.924 0.0713 5.064 4.784
BUB/BnJ f 5.012 0.0713 5.152 4.872
BUB/BnJ m 4.9067 0.0751 5.0542 4.7591
C3H/HeJ f 5.04 0.0713 5.18 4.9
C3H/HeJ m 4.968 0.0713 5.108 4.828
C57BL/10J f 4.832 0.0713 4.972 4.692
C57BL/10J m 5.172 0.0713 5.312 5.032
C57BL/6J f 4.8356 0.0751 4.9831 4.688
C57BL/6J m 4.9244 0.0751 5.072 4.7769
C57BLKS/J f 4.884 0.0713 5.024 4.744
C57BLKS/J m 5.005 0.0797 5.1615 4.8485
C57BR/cdJ f 4.92 0.0582 5.0343 4.8057
C57BR/cdJ m 4.8646 0.0625 4.9874 4.7419
C57L/J f 4.804 0.0713 4.944 4.664
C57L/J m 4.744 0.0713 4.884 4.604
C58/J f 4.7956 0.0751 4.9431 4.648
C58/J m 4.9956 0.0751 5.1431 4.848
CAST/EiJ f 4.792 0.0713 4.932 4.652
CAST/EiJ m 5.004 0.0713 5.144 4.864
CBA/J f 5.02 0.0713 5.16 4.88
CBA/J m 4.892 0.0713 5.032 4.752
CE/J f 5.1733 0.0751 5.3209 5.0258
CE/J m 5.0 0.0797 5.1565 4.8435
CZECHII/EiJ f 4.8756 0.0751 5.0231 4.728
CZECHII/EiJ m 5.048 0.0713 5.188 4.908
DBA/2J f 5.08 0.0713 5.22 4.94
DBA/2J m 5.16 0.0713 5.3 5.02
FVB/NJ f 4.872 0.0713 5.012 4.732
FVB/NJ m 4.828 0.0713 4.968 4.688
I/LnJ f 4.872 0.0713 5.012 4.732
I/LnJ m 5.036 0.0713 5.176 4.896
JF1/MsJ f 5.14 0.0713 5.28 5.0
JF1/MsJ m 4.936 0.0713 5.076 4.796
KK/HlJ f 5.016 0.0713 5.156 4.876
KK/HlJ m 5.2 0.0713 5.34 5.06
LP/J f 4.892 0.0713 5.032 4.752
LP/J m 4.94 0.0713 5.08 4.8
MA/MyJ f 5.01 0.0797 5.1665 4.8535
MA/MyJ m 4.9147 0.0582 5.0289 4.8004
MOLF/EiJ f 5.0133 0.0751 5.1609 4.8658
MOLF/EiJ m 5.036 0.0713 5.176 4.896
MSM/MsJ f 4.812 0.0713 4.952 4.672
MSM/MsJ m 4.652 0.0713 4.792 4.512
NOD/ShiLtJ f 4.9556 0.0751 5.1031 4.808
NOD/ShiLtJ m 4.916 0.0713 5.056 4.776
NON/ShiLtJ f 5.224 0.0713 5.364 5.084
NON/ShiLtJ m 5.364 0.0713 5.504 5.224
NZB/BlNJ f 4.82 0.0713 4.96 4.68
NZB/BlNJ m 4.896 0.0713 5.036 4.756
NZW/LacJ f 5.064 0.0713 5.204 4.924
NZW/LacJ m 5.152 0.0713 5.292 5.012
PERA/EiJ f 4.844 0.0713 4.984 4.704
PERA/EiJ m 4.856 0.0713 4.996 4.716
PL/J f 4.824 0.0713 4.964 4.684
PL/J m 4.896 0.0713 5.036 4.756
PWK/PhJ f 4.872 0.0713 5.012 4.732
PWK/PhJ m 4.776 0.0713 4.916 4.636
RIIIS/J f 4.736 0.0713 4.876 4.596
RIIIS/J m 4.904 0.0713 5.044 4.764
SEA/GnJ f 5.08 0.0713 5.22 4.94
SEA/GnJ m 5.032 0.0713 5.172 4.892
SJL/J f 4.904 0.0713 5.044 4.764
SJL/J m 4.968 0.0713 5.108 4.828
SM/J f 4.828 0.0713 4.968 4.688
SM/J m 4.756 0.0713 4.896 4.616
SPRET/EiJ f 4.8844 0.0751 5.032 4.7369
SPRET/EiJ m 4.856 0.1008 5.0539 4.6581
SWR/J f 5.016 0.0713 5.156 4.876
SWR/J m 4.9867 0.0751 5.1342 4.8391
WSB/EiJ f 4.904 0.0713 5.044 4.764
WSB/EiJ m 5.004 0.0713 5.144 4.864


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 4.8531 0.0518 4.9548 4.7514
A/J both 4.962 0.0504 5.061 4.863
AKR/J both 4.944 0.0518 5.0457 4.8423
BALB/cByJ both 5.0302 0.0518 5.1319 4.9286
BTBR T+ Itpr3tf/J both 5.056 0.0504 5.155 4.957
BUB/BnJ both 4.9593 0.0518 5.061 4.8577
C3H/HeJ both 5.004 0.0504 5.103 4.905
C57BL/10J both 5.002 0.0504 5.101 4.903
C57BL/6J both 4.88 0.0531 4.9843 4.7757
C57BLKS/J both 4.9445 0.0535 5.0495 4.8395
C57BR/cdJ both 4.8923 0.0427 4.9762 4.8085
C57L/J both 4.774 0.0504 4.873 4.675
C58/J both 4.8956 0.0531 4.9999 4.7912
CAST/EiJ both 4.898 0.0504 4.997 4.799
CBA/J both 4.956 0.0504 5.055 4.857
CE/J both 5.0867 0.0548 5.1942 4.9791
CZECHII/EiJ both 4.9618 0.0518 5.0634 4.8601
DBA/2J both 5.12 0.0504 5.219 5.021
FVB/NJ both 4.85 0.0504 4.949 4.751
I/LnJ both 4.954 0.0504 5.053 4.855
JF1/MsJ both 5.038 0.0504 5.137 4.939
KK/HlJ both 5.108 0.0504 5.207 5.009
LP/J both 4.916 0.0504 5.015 4.817
MA/MyJ both 4.9623 0.0493 5.0592 4.8655
MOLF/EiJ both 5.0247 0.0518 5.1263 4.923
MSM/MsJ both 4.732 0.0504 4.831 4.633
NOD/ShiLtJ both 4.9358 0.0518 5.0374 4.8341
NON/ShiLtJ both 5.294 0.0504 5.393 5.195
NZB/BlNJ both 4.858 0.0504 4.957 4.759
NZW/LacJ both 5.108 0.0504 5.207 5.009
PERA/EiJ both 4.85 0.0504 4.949 4.751
PL/J both 4.86 0.0504 4.959 4.761
PWK/PhJ both 4.824 0.0504 4.923 4.725
RIIIS/J both 4.82 0.0504 4.919 4.721
SEA/GnJ both 5.056 0.0504 5.155 4.957
SJL/J both 4.936 0.0504 5.035 4.837
SM/J both 4.792 0.0504 4.891 4.693
SPRET/EiJ both 4.8702 0.0629 4.9936 4.7468
SWR/J both 5.0013 0.0518 5.103 4.8997
WSB/EiJ both 4.954 0.0504 5.053 4.855




  GWAS USING LINEAR MIXED MODELS