Project measure / variable:   Tordoff3   bleeding_time

ID, description, units MPD:10320   bleeding_time   time from tail cut to 1/2 tube of blood collected (approx 30 µL) (local parameter)   [s]  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 13-15wks
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  STRAIN COMPARISON PLOT
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Tordoff3 - time from tail cut to 1/2 tube of blood collected (approx 30 µL) (local parameter)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means62.2   s 59.4   s
Median of the strain means61.2   s 55.2   s
SD of the strain means± 15.8 ± 18.3
Coefficient of variation (CV)0.254 0.307
Min–max range of strain means39.8   –   119   s 34.4   –   129   s
Mean sample size per strain9.4   mice 9.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1355.5616 1355.5616 1.6654 0.1973
strain 39 199381.4403 5112.3446 6.281 < 0.0001
sex:strain 39 19095.4821 489.6277 0.6016 0.9747
Residuals 680 553474.5147 813.9331


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 71.6 26.2   9 8.74 0.366 41.0, 129.0 0.6
129S1/SvImJ m 67.2 26.0   9 8.65 0.386 35.0, 119.0 0.43
A/J f 95.4 22.4   9 7.46 0.234 51.0, 135.0 2.1
A/J m 75.1 24.1   10 7.63 0.321 46.0, 115.0 0.86
AKR/J f 49.6 7.14   9 2.38 0.144 41.0, 62.0 -0.8
AKR/J m 64.9 16.4   8 5.81 0.253 44.0, 90.0 0.3
BALB/cByJ f 61.8 19.2   9 6.41 0.311 37.0, 89.0 -0.02
BALB/cByJ m 64.9 29.5   10 9.32 0.454 25.0, 129.0 0.3
BTBR T+ Itpr3tf/J f 48.4 16.4   10 5.19 0.339 23.0, 71.0 -0.87
BTBR T+ Itpr3tf/J m 65.3 24.4   10 7.72 0.374 30.0, 105.0 0.32
BUB/BnJ f 48.9 9.05   8 3.2 0.185 36.0, 61.0 -0.84
BUB/BnJ m 58.3 13.2   9 4.4 0.226 44.0, 83.0 -0.06
C3H/HeJ f 65.2 15.2   10 4.82 0.234 46.0, 90.0 0.19
C3H/HeJ m 68.3 12.1   10 3.83 0.177 50.0, 88.0 0.49
C57BL/10J f 57.9 14.7   9 4.89 0.253 38.0, 80.0 -0.27
C57BL/10J m 55.4 14.5   10 4.6 0.262 25.0, 80.0 -0.22
C57BL/6J f 60.6 22.9   9 7.64 0.378 29.0, 89.0 -0.1
C57BL/6J m 45.8 18.2   8 6.44 0.398 28.0, 83.0 -0.75
C57BLKS/J f 40.0 9.66   9 3.22 0.241 27.0, 57.0 -1.4
C57BLKS/J m 45.1 13.0   8 4.61 0.289 28.0, 65.0 -0.78
C57BR/cdJ f 62.5 18.5   15 4.77 0.295 30.0, 86.0 0.02
C57BR/cdJ m 53.9 20.0   13 5.54 0.371 23.0, 83.0 -0.3
C57L/J f 50.0 11.2   10 3.55 0.224 33.0, 63.0 -0.77
C57L/J m 45.9 12.8   9 4.26 0.278 34.0, 74.0 -0.74
C58/J f 64.6 13.6   8 4.8 0.21 49.0, 89.0 0.15
C58/J m 44.2 14.8   9 4.94 0.335 14.0, 57.0 -0.83
CAST/EiJ f 54.5 16.0   10 5.05 0.293 31.0, 82.0 -0.49
CAST/EiJ m 49.0 10.3   8 3.63 0.21 37.0, 71.0 -0.57
CBA/J f 49.6 12.3   8 4.35 0.248 37.0, 72.0 -0.8
CBA/J m 57.2 26.5   9 8.83 0.463 27.0, 100.0 -0.12
CE/J f 63.1 21.0   9 6.98 0.332 29.0, 92.0 0.06
CE/J m 49.5 14.9   8 5.26 0.301 31.0, 79.0 -0.54
CZECHII/EiJ f 59.2 13.5   9 4.51 0.229 44.0, 87.0 -0.19
CZECHII/EiJ m 50.3 12.8   10 4.05 0.254 35.0, 82.0 -0.5
DBA/2J f 45.1 6.27   9 2.09 0.139 35.0, 52.0 -1.08
DBA/2J m 49.1 24.7   10 7.81 0.503 26.0, 105.0 -0.56
FVB/NJ f 56.8 17.4   10 5.52 0.307 24.0, 75.0 -0.34
FVB/NJ m 49.8 12.8   9 4.28 0.258 35.0, 77.0 -0.53
I/LnJ f 67.9 25.8   10 8.16 0.38 36.0, 122.0 0.36
I/LnJ m 52.2 12.2   10 3.87 0.235 42.0, 77.0 -0.39
JF1/MsJ f 119.0 78.9   10 24.9 0.664 39.0, 259.0 3.6
JF1/MsJ m 129.0 149.0   10 47.0 1.15 41.0, 522.0 3.81
KK/HlJ f 64.4 10.5   10 3.33 0.163 46.0, 80.0 0.14
KK/HlJ m 46.5 13.8   10 4.36 0.296 26.0, 74.0 -0.71
LP/J f 43.1 20.8   9 6.95 0.483 22.0, 96.0 -1.21
LP/J m 46.3 12.8   10 4.05 0.277 31.0, 77.0 -0.72
MA/MyJ f 69.8 18.0   8 6.38 0.259 40.0, 89.0 0.48
MA/MyJ m 56.3 20.5   15 5.29 0.364 23.0, 98.0 -0.17
MOLF/EiJ f 66.1 14.7   8 5.21 0.223 35.0, 80.0 0.25
MOLF/EiJ m 79.5 24.2   10 7.65 0.304 47.0, 128.0 1.1
MSM/MsJ f 86.0 20.9   10 6.61 0.243 60.0, 126.0 1.51
MSM/MsJ m 97.8 18.4   9 6.12 0.188 64.0, 129.0 2.1
NOD/ShiLtJ f 44.9 15.0   9 5.01 0.335 27.0, 80.0 -1.09
NOD/ShiLtJ m 44.2 11.9   9 3.96 0.269 32.0, 65.0 -0.83
NON/ShiLtJ f 48.5 23.8   10 7.51 0.49 26.0, 95.0 -0.87
NON/ShiLtJ m 34.4 6.38   10 2.02 0.185 26.0, 43.0 -1.37
NZB/BlNJ f 79.7 29.1   9 9.71 0.366 53.0, 132.0 1.11
NZB/BlNJ m 81.2 50.4   10 16.0 0.621 48.0, 199.0 1.19
NZW/LacJ f 70.7 20.1   10 6.37 0.285 28.0, 94.0 0.54
NZW/LacJ m 70.2 15.7   10 4.96 0.223 45.0, 92.0 0.59
PERA/EiJ f 50.5 13.4   10 4.23 0.265 31.0, 74.0 -0.74
PERA/EiJ m 50.6 12.3   10 3.9 0.244 35.0, 79.0 -0.48
PL/J f 70.9 35.0   9 11.7 0.494 40.0, 133.0 0.55
PL/J m 55.1 17.3   8 6.1 0.313 37.0, 89.0 -0.24
PWK/PhJ f 80.2 32.9   10 10.4 0.41 45.0, 156.0 1.14
PWK/PhJ m 72.6 22.2   10 7.02 0.306 50.0, 110.0 0.72
RIIIS/J f 65.8 20.1   10 6.36 0.306 38.0, 100.0 0.23
RIIIS/J m 65.5 18.4   10 5.8 0.28 39.0, 83.0 0.33
SEA/GnJ f 81.1 58.6   10 18.5 0.723 41.0, 230.0 1.2
SEA/GnJ m 95.3 56.0   10 17.7 0.588 50.0, 212.0 1.97
SJL/J f 57.6 21.0   10 6.65 0.365 32.0, 85.0 -0.29
SJL/J m 57.3 21.8   9 7.25 0.379 35.0, 89.0 -0.12
SM/J f 39.8 10.2   9 3.41 0.257 25.0, 55.0 -1.42
SM/J m 35.5 8.32   10 2.63 0.234 25.0, 48.0 -1.31
SPRET/EiJ f 69.7 21.6   9 7.19 0.31 43.0, 100.0 0.48
SPRET/EiJ m 58.0 2.74   5 1.22 0.0472 55.0, 62.0 -0.08
SWR/J f 51.4 22.1   10 6.99 0.43 33.0, 106.0 -0.68
SWR/J m 42.9 14.5   9 4.83 0.338 15.0, 68.0 -0.9
WSB/EiJ f 54.8 14.6   10 4.62 0.267 42.0, 80.0 -0.47
WSB/EiJ m 46.8 12.2   10 3.85 0.26 33.0, 77.0 -0.69


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 71.5556 9.5098 90.2277 52.8834
129S1/SvImJ m 67.2222 9.5098 85.8944 48.55
A/J f 95.4444 9.5098 114.1166 76.7723
A/J m 75.1 9.0218 92.814 57.386
AKR/J f 49.5556 9.5098 68.2277 30.8834
AKR/J m 64.875 10.0867 84.6798 45.0702
BALB/cByJ f 61.7778 9.5098 80.45 43.1056
BALB/cByJ m 64.9 9.0218 82.614 47.186
BTBR T+ Itpr3tf/J f 48.4 9.0218 66.114 30.686
BTBR T+ Itpr3tf/J m 65.3 9.0218 83.014 47.586
BUB/BnJ f 48.875 10.0867 68.6798 29.0702
BUB/BnJ m 58.3333 9.5098 77.0055 39.6612
C3H/HeJ f 65.2 9.0218 82.914 47.486
C3H/HeJ m 68.3 9.0218 86.014 50.586
C57BL/10J f 57.8889 9.5098 76.5611 39.2167
C57BL/10J m 55.4 9.0218 73.114 37.686
C57BL/6J f 60.5556 9.5098 79.2277 41.8834
C57BL/6J m 45.75 10.0867 65.5548 25.9452
C57BLKS/J f 40.0 9.5098 58.6722 21.3278
C57BLKS/J m 45.125 10.0867 64.9298 25.3202
C57BR/cdJ f 62.5333 7.3663 76.9967 48.0699
C57BR/cdJ m 53.9231 7.9127 69.4593 38.3869
C57L/J f 50.0 9.0218 67.714 32.286
C57L/J m 45.8889 9.5098 64.5611 27.2167
C58/J f 64.625 10.0867 84.4298 44.8202
C58/J m 44.2222 9.5098 62.8944 25.55
CAST/EiJ f 54.5 9.0218 72.214 36.786
CAST/EiJ m 49.0 10.0867 68.8048 29.1952
CBA/J f 49.625 10.0867 69.4298 29.8202
CBA/J m 57.2222 9.5098 75.8944 38.55
CE/J f 63.1111 9.5098 81.7833 44.4389
CE/J m 49.5 10.0867 69.3048 29.6952
CZECHII/EiJ f 59.2222 9.5098 77.8944 40.55
CZECHII/EiJ m 50.3 9.0218 68.014 32.586
DBA/2J f 45.1111 9.5098 63.7833 26.4389
DBA/2J m 49.1 9.0218 66.814 31.386
FVB/NJ f 56.8 9.0218 74.514 39.086
FVB/NJ m 49.7778 9.5098 68.45 31.1056
I/LnJ f 67.9 9.0218 85.614 50.186
I/LnJ m 52.2 9.0218 69.914 34.486
JF1/MsJ f 118.8 9.0218 136.514 101.086
JF1/MsJ m 128.8 9.0218 146.514 111.086
KK/HlJ f 64.4 9.0218 82.114 46.686
KK/HlJ m 46.5 9.0218 64.214 28.786
LP/J f 43.1111 9.5098 61.7833 24.4389
LP/J m 46.3 9.0218 64.014 28.586
MA/MyJ f 69.75 10.0867 89.5548 49.9452
MA/MyJ m 56.3333 7.3663 70.7967 41.8699
MOLF/EiJ f 66.125 10.0867 85.9298 46.3202
MOLF/EiJ m 79.5 9.0218 97.214 61.786
MSM/MsJ f 86.0 9.0218 103.714 68.286
MSM/MsJ m 97.7778 9.5098 116.45 79.1056
NOD/ShiLtJ f 44.8889 9.5098 63.5611 26.2167
NOD/ShiLtJ m 44.2222 9.5098 62.8944 25.55
NON/ShiLtJ f 48.5 9.0218 66.214 30.786
NON/ShiLtJ m 34.4 9.0218 52.114 16.686
NZB/BlNJ f 79.6667 9.5098 98.3388 60.9945
NZB/BlNJ m 81.2 9.0218 98.914 63.486
NZW/LacJ f 70.7 9.0218 88.414 52.986
NZW/LacJ m 70.2 9.0218 87.914 52.486
PERA/EiJ f 50.5 9.0218 68.214 32.786
PERA/EiJ m 50.6 9.0218 68.314 32.886
PL/J f 70.8889 9.5098 89.5611 52.2167
PL/J m 55.125 10.0867 74.9298 35.3202
PWK/PhJ f 80.2 9.0218 97.914 62.486
PWK/PhJ m 72.6 9.0218 90.314 54.886
RIIIS/J f 65.8 9.0218 83.514 48.086
RIIIS/J m 65.5 9.0218 83.214 47.786
SEA/GnJ f 81.1 9.0218 98.814 63.386
SEA/GnJ m 95.3 9.0218 113.014 77.586
SJL/J f 57.6 9.0218 75.314 39.886
SJL/J m 57.3333 9.5098 76.0055 38.6612
SM/J f 39.7778 9.5098 58.45 21.1056
SM/J m 35.5 9.0218 53.214 17.786
SPRET/EiJ f 69.6667 9.5098 88.3388 50.9945
SPRET/EiJ m 58.0 12.7588 83.0513 32.9487
SWR/J f 51.4 9.0218 69.114 33.686
SWR/J m 42.8889 9.5098 61.5611 24.2167
WSB/EiJ f 54.8 9.0218 72.514 37.086
WSB/EiJ m 46.8 9.0218 64.514 29.086


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 69.3889 6.7245 82.5921 56.1857
A/J both 85.2722 6.5542 98.1411 72.4033
AKR/J both 57.2153 6.9314 70.8248 43.6057
BALB/cByJ both 63.3389 6.5542 76.2078 50.47
BTBR T+ Itpr3tf/J both 56.85 6.3794 69.3757 44.3243
BUB/BnJ both 53.6042 6.9314 67.2137 39.9946
C3H/HeJ both 66.75 6.3794 79.2757 54.2243
C57BL/10J both 56.6444 6.5542 69.5134 43.7755
C57BL/6J both 53.1528 6.9314 66.7623 39.5432
C57BLKS/J both 42.5625 6.9314 56.1721 28.9529
C57BR/cdJ both 58.2282 5.4054 68.8414 47.615
C57L/J both 47.9444 6.5542 60.8134 35.0755
C58/J both 54.4236 6.9314 68.0332 40.814
CAST/EiJ both 51.75 6.7664 65.0355 38.4645
CBA/J both 53.4236 6.9314 67.0332 39.814
CE/J both 56.3056 6.9314 69.9151 42.696
CZECHII/EiJ both 54.7611 6.5542 67.63 41.8922
DBA/2J both 47.1056 6.5542 59.9745 34.2366
FVB/NJ both 53.2889 6.5542 66.1578 40.42
I/LnJ both 60.05 6.3794 72.5757 47.5243
JF1/MsJ both 123.8 6.3794 136.3257 111.2743
KK/HlJ both 55.45 6.3794 67.9757 42.9243
LP/J both 44.7056 6.5542 57.5745 31.8366
MA/MyJ both 63.0417 6.2451 75.3036 50.7797
MOLF/EiJ both 72.8125 6.7664 86.098 59.527
MSM/MsJ both 91.8889 6.5542 104.7578 79.02
NOD/ShiLtJ both 44.5556 6.7245 57.7588 31.3523
NON/ShiLtJ both 41.45 6.3794 53.9757 28.9243
NZB/BlNJ both 80.4333 6.5542 93.3022 67.5644
NZW/LacJ both 70.45 6.3794 82.9757 57.9243
PERA/EiJ both 50.55 6.3794 63.0757 38.0243
PL/J both 63.0069 6.9314 76.6165 49.3974
PWK/PhJ both 76.4 6.3794 88.9257 63.8743
RIIIS/J both 65.65 6.3794 78.1757 53.1243
SEA/GnJ both 88.2 6.3794 100.7257 75.6743
SJL/J both 57.4667 6.5542 70.3356 44.5978
SM/J both 37.6389 6.5542 50.5078 24.77
SPRET/EiJ both 63.8333 7.9565 79.4556 48.2111
SWR/J both 47.1444 6.5542 60.0134 34.2755
WSB/EiJ both 50.8 6.3794 63.3257 38.2743




  GWAS USING LINEAR MIXED MODELS