Project measure / variable:   Tordoff3   NaCl_pref225

ID, description, units MPD:10316   NaCl_pref225   preference for NaCl (sodium chloride) solutions   [%]  concentration 225 mM  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 11-13wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff3 - preference for NaCl (sodium chloride) solutions concentration 225 mM



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means49.5   % 50.2   %
Median of the strain means47.9   % 50.0   %
SD of the strain means± 13.9 ± 16.1
Coefficient of variation (CV)0.281 0.320
Min–max range of strain means20.8   –   76.5   % 19.6   –   76.3   %
Mean sample size per strain9.8   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 113.0176 113.0176 0.3881 0.5335
strain 39 169180.1822 4337.9534 14.8974 < 0.0001
sex:strain 39 8366.9207 214.5364 0.7368 0.8818
Residuals 709 206453.289 291.1894


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 66.1 30.2   10 9.55 0.457 17.7, 95.8 1.19
129S1/SvImJ m 71.9 19.6   9 6.53 0.272 44.1, 94.3 1.35
A/J f 46.2 23.8   10 7.53 0.515 8.5, 88.4 -0.24
A/J m 47.1 22.9   10 7.25 0.487 18.8, 84.1 -0.2
AKR/J f 36.6 8.53   9 2.84 0.233 21.3, 48.9 -0.93
AKR/J m 24.4 13.1   10 4.16 0.539 9.3, 46.2 -1.61
BALB/cByJ f 61.9 19.4   9 6.47 0.313 25.7, 89.3 0.89
BALB/cByJ m 59.4 12.3   10 3.9 0.207 44.8, 80.7 0.57
BTBR T+ Itpr3tf/J f 54.4 14.3   10 4.51 0.262 37.7, 88.1 0.35
BTBR T+ Itpr3tf/J m 64.8 17.7   10 5.6 0.273 39.7, 94.3 0.9
BUB/BnJ f 62.3 10.3   10 3.27 0.166 42.9, 76.1 0.92
BUB/BnJ m 55.7 10.4   9 3.47 0.187 45.3, 75.6 0.34
C3H/HeJ f 28.3 14.2   10 4.5 0.503 11.7, 51.4 -1.53
C3H/HeJ m 25.5 26.2   10 8.28 1.03 10.7, 98.7 -1.54
C57BL/10J f 49.1 12.1   10 3.82 0.246 35.7, 70.7 -0.03
C57BL/10J m 48.2 13.8   10 4.37 0.287 22.0, 71.1 -0.13
C57BL/6J f 44.1 11.7   9 3.9 0.265 20.2, 61.7 -0.39
C57BL/6J m 50.3 14.6   9 4.86 0.29 25.3, 67.2 0.0
C57BLKS/J f 57.7 7.68   10 2.43 0.133 44.5, 70.9 0.59
C57BLKS/J m 71.5 9.2   8 3.25 0.129 61.4, 84.8 1.32
C57BR/cdJ f 31.0 17.2   15 4.45 0.557 3.1, 73.4 -1.33
C57BR/cdJ m 28.8 14.1   13 3.9 0.489 9.7, 50.7 -1.33
C57L/J f 52.8 8.71   10 2.76 0.165 39.8, 68.1 0.24
C57L/J m 57.2 11.2   10 3.54 0.196 39.5, 79.8 0.43
C58/J f 29.6 28.9   9 9.64 0.978 8.2, 89.8 -1.43
C58/J m 37.8 33.3   9 11.1 0.881 9.7, 91.9 -0.77
CAST/EiJ f 66.4 8.52   10 2.7 0.128 56.8, 82.6 1.21
CAST/EiJ m 71.8 13.7   10 4.32 0.19 53.6, 90.8 1.34
CBA/J f 34.5 13.8   10 4.38 0.402 18.7, 56.3 -1.08
CBA/J m 22.0 13.2   10 4.17 0.6 10.5, 48.8 -1.75
CE/J f 38.4 27.7   9 9.22 0.72 7.6, 91.8 -0.8
CE/J m 49.7 17.4   8 6.14 0.35 26.3, 68.1 -0.03
CZECHII/EiJ f 56.6 32.4   9 10.8 0.573 9.7, 84.6 0.51
CZECHII/EiJ m 50.9 25.1   10 7.94 0.493 7.9, 78.3 0.04
DBA/2J f 42.7 17.6   10 5.56 0.412 7.2, 64.3 -0.49
DBA/2J m 40.9 17.5   10 5.54 0.428 13.1, 66.4 -0.58
FVB/NJ f 69.6 16.3   10 5.14 0.234 44.2, 91.5 1.44
FVB/NJ m 70.6 9.65   10 3.05 0.137 50.6, 81.5 1.27
I/LnJ f 28.1 8.29   10 2.62 0.295 20.3, 47.5 -1.54
I/LnJ m 30.4 17.1   10 5.4 0.562 12.0, 66.3 -1.23
JF1/MsJ f 64.0 19.4   10 6.14 0.303 19.6, 90.9 1.04
JF1/MsJ m 62.6 20.0   10 6.32 0.32 28.7, 88.9 0.77
KK/HlJ f 38.5 19.8   10 6.26 0.515 5.4, 67.4 -0.79
KK/HlJ m 40.2 17.6   10 5.56 0.437 22.4, 75.2 -0.62
LP/J f 48.5 20.1   10 6.36 0.415 23.9, 86.0 -0.07
LP/J m 36.8 18.3   10 5.8 0.498 13.6, 61.5 -0.84
MA/MyJ f 62.2 19.1   8 6.77 0.307 35.3, 86.5 0.91
MA/MyJ m 68.1 15.5   15 4.01 0.228 30.6, 86.1 1.11
MOLF/EiJ f 41.2 11.6   9 3.86 0.281 15.2, 53.5 -0.6
MOLF/EiJ m 43.1 5.68   10 1.8 0.132 34.3, 49.4 -0.44
MSM/MsJ f 59.3 18.4   10 5.83 0.311 37.0, 88.1 0.7
MSM/MsJ m 49.3 14.5   10 4.59 0.294 22.4, 71.8 -0.06
NOD/ShiLtJ f 44.2 18.3   10 5.79 0.414 9.3, 73.9 -0.38
NOD/ShiLtJ m 42.5 13.7   10 4.33 0.322 17.1, 59.6 -0.48
NON/ShiLtJ f 47.2 8.13   10 2.57 0.172 37.5, 63.4 -0.17
NON/ShiLtJ m 54.8 15.6   10 4.93 0.284 24.2, 82.5 0.28
NZB/BlNJ f 61.4 4.45   10 1.41 0.0724 53.7, 67.5 0.85
NZB/BlNJ m 66.7 4.54   10 1.44 0.0681 60.0, 75.7 1.02
NZW/LacJ f 66.2 9.3   10 2.94 0.14 51.3, 81.5 1.2
NZW/LacJ m 64.4 12.7   10 4.03 0.198 45.0, 89.9 0.88
PERA/EiJ f 20.8 11.2   10 3.54 0.538 9.0, 37.3 -2.07
PERA/EiJ m 19.6 11.2   10 3.56 0.573 10.3, 41.2 -1.9
PL/J f 37.9 16.9   10 5.35 0.447 13.5, 64.9 -0.84
PL/J m 43.2 21.6   10 6.84 0.501 19.8, 83.9 -0.44
PWK/PhJ f 67.7 13.9   10 4.41 0.206 54.1, 92.9 1.31
PWK/PhJ m 66.7 24.8   10 7.85 0.372 9.4, 89.0 1.02
RIIIS/J f 62.4 8.97   10 2.84 0.144 50.7, 80.6 0.93
RIIIS/J m 58.8 15.2   10 4.81 0.259 32.8, 75.4 0.53
SEA/GnJ f 45.8 12.9   10 4.09 0.282 30.6, 70.8 -0.27
SEA/GnJ m 48.1 15.3   10 4.83 0.318 14.9, 69.4 -0.13
SJL/J f 76.5 21.7   10 6.85 0.283 20.8, 93.9 1.94
SJL/J m 76.3 16.0   10 5.06 0.21 44.0, 92.9 1.62
SM/J f 41.1 16.8   10 5.31 0.409 6.7, 62.8 -0.61
SM/J m 31.0 13.6   10 4.29 0.438 6.5, 48.9 -1.2
SPRET/EiJ f 44.1 10.3   9 3.42 0.233 30.8, 65.8 -0.39
SPRET/EiJ m 50.2 12.9   5 5.76 0.257 36.2, 64.1 0.0
SWR/J f 62.6 18.5   10 5.86 0.296 41.5, 94.6 0.94
SWR/J m 76.1 13.5   9 4.52 0.178 51.8, 93.7 1.61
WSB/EiJ f 33.1 27.9   10 8.82 0.843 11.8, 86.9 -1.18
WSB/EiJ m 32.2 22.9   10 7.23 0.711 6.4, 78.4 -1.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 66.1 5.3962 76.6944 55.5056
129S1/SvImJ m 71.9111 5.6881 83.0786 60.7436
A/J f 46.22 5.3962 56.8144 35.6256
A/J m 47.12 5.3962 57.7144 36.5256
AKR/J f 36.6222 5.6881 47.7897 25.4547
AKR/J m 24.39 5.3962 34.9844 13.7956
BALB/cByJ f 61.9444 5.6881 73.112 50.7769
BALB/cByJ m 59.38 5.3962 69.9744 48.7856
BTBR T+ Itpr3tf/J f 54.38 5.3962 64.9744 43.7856
BTBR T+ Itpr3tf/J m 64.83 5.3962 75.4244 54.2356
BUB/BnJ f 62.32 5.3962 72.9144 51.7256
BUB/BnJ m 55.7222 5.6881 66.8897 44.5547
C3H/HeJ f 28.3 5.3962 38.8944 17.7056
C3H/HeJ m 25.48 5.3962 36.0744 14.8856
C57BL/10J f 49.11 5.3962 59.7044 38.5156
C57BL/10J m 48.2 5.3962 58.7944 37.6056
C57BL/6J f 44.1444 5.6881 55.312 32.9769
C57BL/6J m 50.3444 5.6881 61.512 39.1769
C57BLKS/J f 57.7 5.3962 68.2944 47.1056
C57BLKS/J m 71.5375 6.0331 83.3824 59.6926
C57BR/cdJ f 30.9533 4.406 39.6037 22.303
C57BR/cdJ m 28.7538 4.7328 38.0458 19.4619
C57L/J f 52.84 5.3962 63.4344 42.2456
C57L/J m 57.2 5.3962 67.7944 46.6056
C58/J f 29.5556 5.6881 40.7231 18.388
C58/J m 37.7778 5.6881 48.9453 26.6103
CAST/EiJ f 66.35 5.3962 76.9444 55.7556
CAST/EiJ m 71.78 5.3962 82.3744 61.1856
CBA/J f 34.48 5.3962 45.0744 23.8856
CBA/J m 22.01 5.3962 32.6044 11.4156
CE/J f 38.4 5.6881 49.5675 27.2325
CE/J m 49.6625 6.0331 61.5074 37.8176
CZECHII/EiJ f 56.6 5.6881 67.7675 45.4325
CZECHII/EiJ m 50.9 5.3962 61.4944 40.3056
DBA/2J f 42.7 5.3962 53.2944 32.1056
DBA/2J m 40.92 5.3962 51.5144 30.3256
FVB/NJ f 69.61 5.3962 80.2044 59.0156
FVB/NJ m 70.6 5.3962 81.1944 60.0056
I/LnJ f 28.08 5.3962 38.6744 17.4856
I/LnJ m 30.42 5.3962 41.0144 19.8256
JF1/MsJ f 64.02 5.3962 74.6144 53.4256
JF1/MsJ m 62.59 5.3962 73.1844 51.9956
KK/HlJ f 38.46 5.3962 49.0544 27.8656
KK/HlJ m 40.25 5.3962 50.8444 29.6556
LP/J f 48.46 5.3962 59.0544 37.8656
LP/J m 36.79 5.3962 47.3844 26.1956
MA/MyJ f 62.2375 6.0331 74.0824 50.3926
MA/MyJ m 68.0867 4.406 76.737 59.4363
MOLF/EiJ f 41.2111 5.6881 52.3786 30.0436
MOLF/EiJ m 43.06 5.3962 53.6544 32.4656
MSM/MsJ f 59.31 5.3962 69.9044 48.7156
MSM/MsJ m 49.32 5.3962 59.9144 38.7256
NOD/ShiLtJ f 44.21 5.3962 54.8044 33.6156
NOD/ShiLtJ m 42.48 5.3962 53.0744 31.8856
NON/ShiLtJ f 47.24 5.3962 57.8344 36.6456
NON/ShiLtJ m 54.84 5.3962 65.4344 44.2456
NZB/BlNJ f 61.39 5.3962 71.9844 50.7956
NZB/BlNJ m 66.65 5.3962 77.2444 56.0556
NZW/LacJ f 66.21 5.3962 76.8044 55.6156
NZW/LacJ m 64.39 5.3962 74.9844 53.7956
PERA/EiJ f 20.78 5.3962 31.3744 10.1856
PERA/EiJ m 19.62 5.3962 30.2144 9.0256
PL/J f 37.89 5.3962 48.4844 27.2956
PL/J m 43.17 5.3962 53.7644 32.5756
PWK/PhJ f 67.69 5.3962 78.2844 57.0956
PWK/PhJ m 66.72 5.3962 77.3144 56.1256
RIIIS/J f 62.38 5.3962 72.9744 51.7856
RIIIS/J m 58.78 5.3962 69.3744 48.1856
SEA/GnJ f 45.82 5.3962 56.4144 35.2256
SEA/GnJ m 48.13 5.3962 58.7244 37.5356
SJL/J f 76.47 5.3962 87.0644 65.8756
SJL/J m 76.29 5.3962 86.8844 65.6956
SM/J f 41.07 5.3962 51.6644 30.4756
SM/J m 30.96 5.3962 41.5544 20.3656
SPRET/EiJ f 44.1111 5.6881 55.2786 32.9436
SPRET/EiJ m 50.2 7.6314 65.1828 35.2172
SWR/J f 62.59 5.3962 73.1844 51.9956
SWR/J m 76.1222 5.6881 87.2897 64.9547
WSB/EiJ f 33.07 5.3962 43.6644 22.4756
WSB/EiJ m 32.16 5.3962 42.7544 21.5656


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 69.0056 3.9202 76.7022 61.3089
A/J both 46.67 3.8157 54.1614 39.1786
AKR/J both 30.5061 3.9202 38.2028 22.8094
BALB/cByJ both 60.6622 3.9202 68.3589 52.9655
BTBR T+ Itpr3tf/J both 59.605 3.8157 67.0964 52.1136
BUB/BnJ both 59.0211 3.9202 66.7178 51.3244
C3H/HeJ both 26.89 3.8157 34.3814 19.3986
C57BL/10J both 48.655 3.8157 56.1464 41.1636
C57BL/6J both 47.2444 4.0221 55.1411 39.3478
C57BLKS/J both 64.6188 4.0471 72.5646 56.6729
C57BR/cdJ both 29.8536 3.2331 36.2012 23.506
C57L/J both 55.02 3.8157 62.5114 47.5286
C58/J both 33.6667 4.0221 41.5633 25.77
CAST/EiJ both 69.065 3.8157 76.5564 61.5736
CBA/J both 28.245 3.8157 35.7364 20.7536
CE/J both 44.0313 4.1459 52.1709 35.8916
CZECHII/EiJ both 53.75 3.9202 61.4467 46.0533
DBA/2J both 41.81 3.8157 49.3014 34.3186
FVB/NJ both 70.105 3.8157 77.5964 62.6136
I/LnJ both 29.25 3.8157 36.7414 21.7586
JF1/MsJ both 63.305 3.8157 70.7964 55.8136
KK/HlJ both 39.355 3.8157 46.8464 31.8636
LP/J both 42.625 3.8157 50.1164 35.1336
MA/MyJ both 65.1621 3.7353 72.4958 57.8284
MOLF/EiJ both 42.1356 3.9202 49.8322 34.4389
MSM/MsJ both 54.315 3.8157 61.8064 46.8236
NOD/ShiLtJ both 43.345 3.8157 50.8364 35.8536
NON/ShiLtJ both 51.04 3.8157 58.5314 43.5486
NZB/BlNJ both 64.02 3.8157 71.5114 56.5286
NZW/LacJ both 65.3 3.8157 72.7914 57.8086
PERA/EiJ both 20.2 3.8157 27.6914 12.7086
PL/J both 40.53 3.8157 48.0214 33.0386
PWK/PhJ both 67.205 3.8157 74.6964 59.7136
RIIIS/J both 60.58 3.8157 68.0714 53.0886
SEA/GnJ both 46.975 3.8157 54.4664 39.4836
SJL/J both 76.38 3.8157 83.8714 68.8886
SM/J both 36.015 3.8157 43.5064 28.5236
SPRET/EiJ both 47.1556 4.759 56.499 37.8121
SWR/J both 69.3561 3.9202 77.0528 61.6594
WSB/EiJ both 32.615 3.8157 40.1064 25.1236




  GWAS USING LINEAR MIXED MODELS