Project measure / variable:   Tordoff3   NaCl_pref75

ID, description, units MPD:10315   NaCl_pref75   preference for NaCl (sodium chloride) solutions   [%]  concentration 75 mM  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 11-13wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff3 - preference for NaCl (sodium chloride) solutions concentration 75 mM



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means62.4   % 61.3   %
Median of the strain means63.1   % 61.1   %
SD of the strain means± 12.3 ± 12.5
Coefficient of variation (CV)0.197 0.204
Min–max range of strain means31.4   –   91.6   % 36.7   –   89.6   %
Mean sample size per strain9.8   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 122.7348 122.7348 0.3963 0.5292
strain 39 113759.5337 2916.9111 9.4181 < 0.0001
sex:strain 39 8491.803 217.7385 0.703 0.9141
Residuals 710 219895.3717 309.7118


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 72.6 18.5   10 5.86 0.255 41.2, 94.3 0.83
129S1/SvImJ m 68.4 18.0   9 6.0 0.263 26.1, 90.2 0.57
A/J f 57.5 20.5   10 6.48 0.357 15.8, 78.3 -0.4
A/J m 67.9 12.1   10 3.83 0.179 49.4, 86.2 0.53
AKR/J f 58.1 11.4   9 3.8 0.196 33.3, 72.4 -0.35
AKR/J m 53.3 19.9   10 6.28 0.373 12.8, 79.3 -0.64
BALB/cByJ f 73.5 15.7   9 5.24 0.214 54.0, 91.5 0.9
BALB/cByJ m 73.3 11.6   10 3.66 0.158 51.2, 89.5 0.96
BTBR T+ Itpr3tf/J f 74.3 13.1   10 4.15 0.177 53.4, 94.5 0.97
BTBR T+ Itpr3tf/J m 76.6 16.6   10 5.26 0.217 51.2, 95.7 1.23
BUB/BnJ f 55.9 15.5   10 4.91 0.278 29.1, 76.1 -0.53
BUB/BnJ m 69.5 9.28   9 3.09 0.133 56.0, 86.0 0.66
C3H/HeJ f 44.3 17.0   10 5.38 0.384 15.4, 65.8 -1.48
C3H/HeJ m 48.6 22.6   10 7.15 0.465 8.0, 76.9 -1.01
C57BL/10J f 69.7 6.14   10 1.94 0.088 56.5, 77.3 0.59
C57BL/10J m 73.3 8.18   10 2.59 0.112 58.3, 81.4 0.96
C57BL/6J f 59.5 11.9   9 3.95 0.199 33.0, 73.0 -0.24
C57BL/6J m 65.1 15.5   9 5.18 0.239 45.2, 83.3 0.31
C57BLKS/J f 69.3 7.92   10 2.51 0.114 60.6, 82.3 0.56
C57BLKS/J m 68.8 8.38   8 2.96 0.122 57.1, 79.5 0.6
C57BR/cdJ f 49.9 20.3   15 5.25 0.407 12.5, 75.5 -1.02
C57BR/cdJ m 43.7 13.6   13 3.77 0.311 21.3, 64.2 -1.41
C57L/J f 54.5 13.4   10 4.23 0.245 37.3, 72.1 -0.65
C57L/J m 54.4 11.8   10 3.74 0.218 31.7, 75.7 -0.55
C58/J f 63.7 32.0   9 10.7 0.502 7.4, 94.9 0.1
C58/J m 56.3 30.1   9 10.0 0.534 7.3, 94.2 -0.4
CAST/EiJ f 74.3 12.2   11 3.69 0.165 49.2, 85.7 0.97
CAST/EiJ m 72.7 10.2   10 3.24 0.141 50.7, 85.5 0.91
CBA/J f 44.7 23.6   10 7.47 0.528 16.5, 79.5 -1.44
CBA/J m 42.4 26.7   10 8.46 0.631 11.4, 78.9 -1.51
CE/J f 70.4 22.9   9 7.62 0.325 30.6, 92.9 0.65
CE/J m 70.8 19.9   8 7.03 0.281 33.8, 87.3 0.76
CZECHII/EiJ f 61.3 28.7   9 9.56 0.468 8.7, 89.7 -0.09
CZECHII/EiJ m 51.7 28.3   10 8.96 0.548 8.7, 92.9 -0.77
DBA/2J f 55.7 22.7   10 7.19 0.408 18.1, 87.6 -0.55
DBA/2J m 57.1 12.0   10 3.79 0.21 33.3, 68.6 -0.33
FVB/NJ f 81.6 8.81   10 2.79 0.108 62.2, 93.3 1.56
FVB/NJ m 78.1 6.16   10 1.95 0.0789 67.4, 85.3 1.35
I/LnJ f 49.0 14.2   10 4.49 0.29 21.9, 74.4 -1.09
I/LnJ m 57.8 16.4   10 5.2 0.284 25.5, 77.6 -0.28
JF1/MsJ f 66.7 29.5   10 9.32 0.442 12.0, 88.4 0.35
JF1/MsJ m 69.6 18.8   10 5.95 0.27 23.7, 85.7 0.67
KK/HlJ f 70.2 12.8   10 4.03 0.182 49.2, 88.4 0.63
KK/HlJ m 62.4 26.7   10 8.44 0.428 17.6, 95.7 0.09
LP/J f 62.5 19.6   10 6.19 0.313 28.8, 88.8 0.01
LP/J m 53.1 21.1   10 6.67 0.397 18.9, 75.8 -0.65
MA/MyJ f 91.6 7.19   8 2.54 0.0785 76.6, 98.4 2.37
MA/MyJ m 89.6 7.42   15 1.92 0.0828 70.2, 97.4 2.27
MOLF/EiJ f 45.6 9.84   9 3.28 0.216 30.0, 56.3 -1.37
MOLF/EiJ m 47.1 10.7   10 3.37 0.226 31.0, 64.9 -1.13
MSM/MsJ f 70.3 11.2   10 3.54 0.159 57.1, 85.7 0.64
MSM/MsJ m 60.9 10.6   10 3.35 0.174 39.3, 77.3 -0.03
NOD/ShiLtJ f 63.9 26.1   10 8.25 0.408 4.1, 90.5 0.12
NOD/ShiLtJ m 48.5 21.6   10 6.84 0.446 10.4, 69.2 -1.02
NON/ShiLtJ f 59.2 8.75   10 2.77 0.148 47.6, 71.1 -0.26
NON/ShiLtJ m 55.0 20.6   10 6.51 0.374 25.7, 85.3 -0.5
NZB/BlNJ f 65.1 6.45   10 2.04 0.099 58.1, 77.1 0.22
NZB/BlNJ m 61.4 8.6   10 2.72 0.14 46.4, 73.6 0.01
NZW/LacJ f 83.5 8.22   10 2.6 0.0985 64.2, 93.2 1.71
NZW/LacJ m 82.3 5.38   10 1.7 0.0654 75.4, 91.6 1.68
PERA/EiJ f 31.4 25.0   10 7.9 0.796 7.1, 78.3 -2.53
PERA/EiJ m 41.9 28.2   10 8.92 0.673 8.3, 85.1 -1.55
PL/J f 51.5 24.1   10 7.63 0.469 15.9, 93.1 -0.89
PL/J m 52.0 23.4   10 7.4 0.45 18.4, 84.0 -0.74
PWK/PhJ f 67.3 19.8   10 6.27 0.295 33.9, 93.5 0.4
PWK/PhJ m 69.5 24.0   10 7.59 0.346 11.7, 90.0 0.66
RIIIS/J f 62.1 7.14   10 2.26 0.115 48.5, 71.7 -0.03
RIIIS/J m 63.5 8.38   10 2.65 0.132 47.3, 75.9 0.18
SEA/GnJ f 60.2 11.5   10 3.64 0.191 39.5, 80.0 -0.18
SEA/GnJ m 59.4 17.1   10 5.41 0.288 21.9, 77.6 -0.15
SJL/J f 71.7 22.7   10 7.17 0.317 15.2, 86.7 0.75
SJL/J m 63.4 20.1   10 6.34 0.317 28.2, 86.1 0.17
SM/J f 53.4 18.9   10 5.97 0.353 19.2, 78.2 -0.74
SM/J m 43.6 19.7   10 6.23 0.451 5.9, 69.0 -1.42
SPRET/EiJ f 70.6 14.5   9 4.82 0.205 50.0, 87.9 0.66
SPRET/EiJ m 58.2 11.3   5 5.05 0.194 46.2, 76.1 -0.25
SWR/J f 70.8 14.5   10 4.57 0.204 38.1, 88.9 0.68
SWR/J m 83.5 9.78   9 3.26 0.117 65.7, 94.8 1.78
WSB/EiJ f 39.9 15.0   10 4.74 0.375 9.6, 59.3 -1.83
WSB/EiJ m 36.7 19.6   10 6.2 0.535 8.9, 59.4 -1.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 72.58 5.5652 83.5062 61.6538
129S1/SvImJ m 68.4222 5.8662 79.9394 56.905
A/J f 57.46 5.5652 68.3862 46.5338
A/J m 67.87 5.5652 78.7962 56.9438
AKR/J f 58.1333 5.8662 69.6505 46.6161
AKR/J m 53.32 5.5652 64.2462 42.3938
BALB/cByJ f 73.4667 5.8662 84.9839 61.9495
BALB/cByJ m 73.31 5.5652 84.2362 62.3838
BTBR T+ Itpr3tf/J f 74.33 5.5652 85.2562 63.4038
BTBR T+ Itpr3tf/J m 76.58 5.5652 87.5062 65.6538
BUB/BnJ f 55.89 5.5652 66.8162 44.9638
BUB/BnJ m 69.5333 5.8662 81.0505 58.0161
C3H/HeJ f 44.35 5.5652 55.2762 33.4238
C3H/HeJ m 48.59 5.5652 59.5162 37.6638
C57BL/10J f 69.73 5.5652 80.6562 58.8038
C57BL/10J m 73.26 5.5652 84.1862 62.3338
C57BL/6J f 59.5222 5.8662 71.0394 48.005
C57BL/6J m 65.0667 5.8662 76.5839 53.5495
C57BLKS/J f 69.3 5.5652 80.2262 58.3738
C57BLKS/J m 68.7875 6.2221 81.0033 56.5717
C57BR/cdJ f 49.9067 4.5439 58.8278 40.9855
C57BR/cdJ m 43.6615 4.881 53.2444 34.0787
C57L/J f 54.51 5.5652 65.4362 43.5838
C57L/J m 54.39 5.5652 65.3162 43.4638
C58/J f 63.7333 5.8662 75.2505 52.2161
C58/J m 56.3222 5.8662 67.8394 44.805
CAST/EiJ f 74.3273 5.3062 84.745 63.9096
CAST/EiJ m 72.74 5.5652 83.6662 61.8138
CBA/J f 44.73 5.5652 55.6562 33.8038
CBA/J m 42.41 5.5652 53.3362 31.4838
CE/J f 70.4222 5.8662 81.9394 58.905
CE/J m 70.775 6.2221 82.9908 58.5592
CZECHII/EiJ f 61.2667 5.8662 72.7839 49.7495
CZECHII/EiJ m 51.68 5.5652 62.6062 40.7538
DBA/2J f 55.74 5.5652 66.6662 44.8138
DBA/2J m 57.06 5.5652 67.9862 46.1338
FVB/NJ f 81.61 5.5652 92.5362 70.6838
FVB/NJ m 78.06 5.5652 88.9862 67.1338
I/LnJ f 48.98 5.5652 59.9062 38.0538
I/LnJ m 57.83 5.5652 68.7562 46.9038
JF1/MsJ f 66.7 5.5652 77.6262 55.7738
JF1/MsJ m 69.62 5.5652 80.5462 58.6938
KK/HlJ f 70.18 5.5652 81.1062 59.2538
KK/HlJ m 62.39 5.5652 73.3162 51.4638
LP/J f 62.51 5.5652 73.4362 51.5838
LP/J m 53.09 5.5652 64.0162 42.1638
MA/MyJ f 91.55 6.2221 103.7658 79.3342
MA/MyJ m 89.6133 4.5439 98.5345 80.6922
MOLF/EiJ f 45.5667 5.8662 57.0839 34.0495
MOLF/EiJ m 47.12 5.5652 58.0462 36.1938
MSM/MsJ f 70.27 5.5652 81.1962 59.3438
MSM/MsJ m 60.86 5.5652 71.7862 49.9338
NOD/ShiLtJ f 63.91 5.5652 74.8362 52.9838
NOD/ShiLtJ m 48.48 5.5652 59.4062 37.5538
NON/ShiLtJ f 59.22 5.5652 70.1462 48.2938
NON/ShiLtJ m 55.0 5.5652 65.9262 44.0738
NZB/BlNJ f 65.12 5.5652 76.0462 54.1938
NZB/BlNJ m 61.38 5.5652 72.3062 50.4538
NZW/LacJ f 83.46 5.5652 94.3862 72.5338
NZW/LacJ m 82.28 5.5652 93.2062 71.3538
PERA/EiJ f 31.39 5.5652 42.3162 20.4638
PERA/EiJ m 41.93 5.5652 52.8562 31.0038
PL/J f 51.51 5.5652 62.4362 40.5838
PL/J m 51.97 5.5652 62.8962 41.0438
PWK/PhJ f 67.25 5.5652 78.1762 56.3238
PWK/PhJ m 69.45 5.5652 80.3762 58.5238
RIIIS/J f 62.13 5.5652 73.0562 51.2038
RIIIS/J m 63.46 5.5652 74.3862 52.5338
SEA/GnJ f 60.25 5.5652 71.1762 49.3238
SEA/GnJ m 59.39 5.5652 70.3162 48.4638
SJL/J f 71.66 5.5652 82.5862 60.7338
SJL/J m 63.36 5.5652 74.2862 52.4338
SM/J f 53.43 5.5652 64.3562 42.5038
SM/J m 43.64 5.5652 54.5662 32.7138
SPRET/EiJ f 70.6222 5.8662 82.1394 59.105
SPRET/EiJ m 58.18 7.8703 73.6319 42.7281
SWR/J f 70.76 5.5652 81.6862 59.8338
SWR/J m 83.5111 5.8662 95.0283 71.9939
WSB/EiJ f 39.91 5.5652 50.8362 28.9838
WSB/EiJ m 36.69 5.5652 47.6162 25.7638


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 70.5011 4.043 78.4388 62.5634
A/J both 62.665 3.9352 70.391 54.939
AKR/J both 55.7267 4.043 63.6643 47.789
BALB/cByJ both 73.3883 4.043 81.326 65.4507
BTBR T+ Itpr3tf/J both 75.455 3.9352 83.181 67.729
BUB/BnJ both 62.7117 4.043 70.6493 54.774
C3H/HeJ both 46.47 3.9352 54.196 38.744
C57BL/10J both 71.495 3.9352 79.221 63.769
C57BL/6J both 62.2944 4.148 70.4383 54.1506
C57BLKS/J both 69.0438 4.1739 77.2384 60.8491
C57BR/cdJ both 46.7841 3.3343 53.3305 40.2377
C57L/J both 54.45 3.9352 62.176 46.724
C58/J both 60.0278 4.148 68.1717 51.8839
CAST/EiJ both 73.5336 3.8447 81.082 65.9853
CBA/J both 43.57 3.9352 51.296 35.844
CE/J both 70.5986 4.2757 78.9931 62.2041
CZECHII/EiJ both 56.4733 4.043 64.411 48.5357
DBA/2J both 56.4 3.9352 64.126 48.674
FVB/NJ both 79.835 3.9352 87.561 72.109
I/LnJ both 53.405 3.9352 61.131 45.679
JF1/MsJ both 68.16 3.9352 75.886 60.434
KK/HlJ both 66.285 3.9352 74.011 58.559
LP/J both 57.8 3.9352 65.526 50.074
MA/MyJ both 90.5817 3.8523 98.145 83.0184
MOLF/EiJ both 46.3433 4.043 54.281 38.4057
MSM/MsJ both 65.565 3.9352 73.291 57.839
NOD/ShiLtJ both 56.195 3.9352 63.921 48.469
NON/ShiLtJ both 57.11 3.9352 64.836 49.384
NZB/BlNJ both 63.25 3.9352 70.976 55.524
NZW/LacJ both 82.87 3.9352 90.596 75.144
PERA/EiJ both 36.66 3.9352 44.386 28.934
PL/J both 51.74 3.9352 59.466 44.014
PWK/PhJ both 68.35 3.9352 76.076 60.624
RIIIS/J both 62.795 3.9352 70.521 55.069
SEA/GnJ both 59.82 3.9352 67.546 52.094
SJL/J both 67.51 3.9352 75.236 59.784
SM/J both 48.535 3.9352 56.261 40.809
SPRET/EiJ both 64.4011 4.908 74.0371 54.7651
SWR/J both 77.1356 4.043 85.0732 69.1979
WSB/EiJ both 38.3 3.9352 46.026 30.574




  GWAS USING LINEAR MIXED MODELS