Project measure / variable:   Tordoff3   CaLa_pref75

ID, description, units MPD:10313   CaLa_pref75   preference for CaLa (calcium lactate) solutions   [%]  concentration 75 mM  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 10-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff3 - preference for CaLa (calcium lactate) solutions concentration 75 mM



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means33.7   % 31.5   %
Median of the strain means31.2   % 28.6   %
SD of the strain means± 15.8 ± 16.3
Coefficient of variation (CV)0.469 0.516
Min–max range of strain means6.37   –   73.4   % 6.61   –   87.0   %
Mean sample size per strain9.8   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 521.6526 521.6526 1.9403 0.1641
strain 39 181320.2298 4649.2367 17.2926 < 0.0001
sex:strain 39 18005.2504 461.6731 1.7172 0.0048
Residuals 710 190888.2798 268.8567


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 38.7 21.6   10 6.83 0.558 6.1, 73.3 0.32
129S1/SvImJ m 40.1 22.9   9 7.62 0.571 7.3, 81.1 0.53
A/J f 47.7 8.87   10 2.8 0.186 34.8, 62.5 0.89
A/J m 49.1 11.2   10 3.56 0.229 30.5, 63.5 1.08
AKR/J f 25.3 15.4   9 5.12 0.608 9.0, 51.4 -0.53
AKR/J m 25.6 23.8   10 7.51 0.927 8.9, 86.0 -0.36
BALB/cByJ f 43.5 14.8   9 4.94 0.341 28.8, 74.5 0.62
BALB/cByJ m 45.6 26.2   10 8.27 0.574 10.4, 75.8 0.87
BTBR T+ Itpr3tf/J f 55.5 18.0   10 5.68 0.324 26.6, 84.0 1.38
BTBR T+ Itpr3tf/J m 68.4 20.2   10 6.39 0.296 29.7, 93.2 2.27
BUB/BnJ f 41.6 16.9   10 5.36 0.407 24.8, 80.6 0.5
BUB/BnJ m 29.2 15.7   9 5.22 0.537 12.7, 52.3 -0.14
C3H/HeJ f 56.1 22.2   10 7.02 0.395 21.3, 85.9 1.42
C3H/HeJ m 44.8 25.0   10 7.91 0.558 12.3, 87.3 0.82
C57BL/10J f 20.6 10.6   10 3.37 0.516 10.2, 45.0 -0.83
C57BL/10J m 16.8 11.4   10 3.61 0.68 7.5, 47.3 -0.9
C57BL/6J f 19.9 8.34   9 2.78 0.419 14.3, 40.8 -0.87
C57BL/6J m 19.4 6.1   9 2.03 0.315 9.5, 29.4 -0.75
C57BLKS/J f 41.1 12.4   10 3.93 0.302 22.5, 59.4 0.47
C57BLKS/J m 45.7 9.16   8 3.24 0.2 31.5, 55.2 0.87
C57BR/cdJ f 10.7 5.56   15 1.44 0.521 3.0, 25.2 -1.45
C57BR/cdJ m 13.8 7.55   13 2.1 0.547 5.0, 30.2 -1.09
C57L/J f 39.0 10.2   10 3.24 0.263 23.6, 56.3 0.34
C57L/J m 29.3 19.2   10 6.07 0.655 7.1, 71.6 -0.14
C58/J f 6.37 4.05   9 1.35 0.636 2.2, 13.6 -1.73
C58/J m 6.61 2.38   9 0.794 0.36 2.7, 9.0 -1.53
CAST/EiJ f 31.7 13.0   11 3.92 0.41 13.1, 51.6 -0.13
CAST/EiJ m 28.1 12.0   10 3.8 0.428 13.8, 46.9 -0.21
CBA/J f 39.9 20.5   10 6.49 0.515 14.9, 73.5 0.39
CBA/J m 40.5 18.6   10 5.88 0.459 12.3, 67.6 0.55
CE/J f 10.6 6.44   9 2.15 0.607 -1.46
CE/J m 12.5 1.88   8 0.664 0.15 9.3, 15.3 -1.17
CZECHII/EiJ f 20.4 13.3   9 4.42 0.651 10.3, 49.0 -0.84
CZECHII/EiJ m 23.8 19.9   10 6.31 0.838 10.0, 77.1 -0.47
DBA/2J f 23.0 11.7   10 3.69 0.508 8.4, 38.7 -0.68
DBA/2J m 35.7 23.0   10 7.26 0.643 10.0, 80.2 0.26
FVB/NJ f 25.1 16.9   10 5.34 0.674 7.5, 53.4 -0.54
FVB/NJ m 17.6 11.7   10 3.69 0.663 9.8, 49.2 -0.86
I/LnJ f 23.0 8.24   10 2.61 0.358 8.9, 37.9 -0.68
I/LnJ m 31.3 12.7   10 4.0 0.404 12.6, 50.6 -0.01
JF1/MsJ f 63.1 13.2   10 4.18 0.209 38.1, 82.6 1.86
JF1/MsJ m 55.0 18.2   10 5.76 0.331 31.8, 82.1 1.44
KK/HlJ f 14.0 6.55   10 2.07 0.468 5.5, 25.6 -1.25
KK/HlJ m 9.38 10.0   10 3.17 1.07 1.4, 36.8 -1.36
LP/J f 38.2 14.7   10 4.66 0.386 16.4, 69.9 0.29
LP/J m 40.5 23.7   10 7.49 0.584 12.9, 77.3 0.55
MA/MyJ f 65.5 32.9   8 11.6 0.503 7.5, 95.6 2.01
MA/MyJ m 48.0 30.7   15 7.93 0.64 6.5, 93.0 1.01
MOLF/EiJ f 30.7 25.5   9 8.49 0.829 10.4, 94.0 -0.19
MOLF/EiJ m 34.6 19.9   10 6.28 0.573 10.4, 64.4 0.19
MSM/MsJ f 28.5 21.2   10 6.7 0.742 8.8, 83.0 -0.33
MSM/MsJ m 45.2 22.5   10 7.12 0.498 7.3, 73.9 0.84
NOD/ShiLtJ f 21.5 10.8   10 3.42 0.504 6.3, 34.6 -0.77
NOD/ShiLtJ m 24.3 22.1   10 7.0 0.911 7.2, 78.9 -0.44
NON/ShiLtJ f 27.3 10.3   10 3.25 0.376 12.0, 40.8 -0.4
NON/ShiLtJ m 22.7 9.16   10 2.9 0.403 9.2, 42.9 -0.54
NZB/BlNJ f 46.7 12.1   10 3.81 0.258 27.6, 66.1 0.82
NZB/BlNJ m 38.4 14.3   10 4.51 0.371 15.8, 62.1 0.42
NZW/LacJ f 45.0 16.3   10 5.15 0.362 10.4, 61.4 0.72
NZW/LacJ m 32.2 20.9   10 6.61 0.648 8.1, 63.0 0.04
PERA/EiJ f 41.2 26.8   10 8.47 0.649 18.4, 83.7 0.48
PERA/EiJ m 18.1 4.73   10 1.49 0.262 12.5, 28.6 -0.82
PL/J f 13.2 5.12   10 1.62 0.388 4.8, 23.6 -1.3
PL/J m 14.6 6.52   10 2.06 0.446 7.8, 26.9 -1.04
PWK/PhJ f 73.4 14.4   10 4.57 0.197 43.5, 93.5 2.51
PWK/PhJ m 87.0 4.16   10 1.31 0.0478 80.3, 92.6 3.41
RIIIS/J f 43.3 11.8   10 3.74 0.273 30.3, 67.9 0.61
RIIIS/J m 32.9 13.3   10 4.19 0.403 16.0, 54.0 0.09
SEA/GnJ f 19.5 18.0   10 5.7 0.922 5.3, 63.8 -0.9
SEA/GnJ m 28.1 13.9   10 4.39 0.495 12.6, 57.1 -0.21
SJL/J f 24.2 12.0   10 3.78 0.494 8.2, 45.2 -0.6
SJL/J m 16.5 8.92   10 2.82 0.541 7.1, 31.4 -0.92
SM/J f 47.2 29.0   10 9.17 0.613 8.7, 85.5 0.85
SM/J m 17.9 21.2   10 6.72 1.19 4.7, 65.2 -0.84
SPRET/EiJ f 32.9 13.4   9 4.46 0.407 16.4, 54.5 -0.05
SPRET/EiJ m 23.0 16.1   5 7.2 0.7 11.1, 50.9 -0.52
SWR/J f 26.4 17.3   10 5.47 0.655 4.3, 55.6 -0.46
SWR/J m 26.7 15.7   9 5.22 0.586 10.8, 63.7 -0.3
WSB/EiJ f 25.9 10.8   10 3.42 0.418 10.2, 46.0 -0.49
WSB/EiJ m 21.7 9.21   10 2.91 0.425 12.3, 42.3 -0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 38.71 5.1851 48.89 28.53
129S1/SvImJ m 40.0556 5.4656 50.7863 29.3249
A/J f 47.74 5.1851 57.92 37.56
A/J m 49.08 5.1851 59.26 38.9
AKR/J f 25.3 5.4656 36.0307 14.5693
AKR/J m 25.61 5.1851 35.79 15.43
BALB/cByJ f 43.5444 5.4656 54.2751 32.8137
BALB/cByJ m 45.56 5.1851 55.74 35.38
BTBR T+ Itpr3tf/J f 55.5 5.1851 65.68 45.32
BTBR T+ Itpr3tf/J m 68.37 5.1851 78.55 58.19
BUB/BnJ f 41.64 5.1851 51.82 31.46
BUB/BnJ m 29.1556 5.4656 39.8863 18.4249
C3H/HeJ f 56.11 5.1851 66.29 45.93
C3H/HeJ m 44.77 5.1851 54.95 34.59
C57BL/10J f 20.65 5.1851 30.83 10.47
C57BL/10J m 16.77 5.1851 26.95 6.59
C57BL/6J f 19.9 5.4656 30.6307 9.1693
C57BL/6J m 19.3667 5.4656 30.0974 8.636
C57BLKS/J f 41.15 5.1851 51.33 30.97
C57BLKS/J m 45.7125 5.7972 57.0941 34.3309
C57BR/cdJ f 10.68 4.2336 18.992 2.368
C57BR/cdJ m 13.8077 4.5477 22.7362 4.8792
C57L/J f 39.03 5.1851 49.21 28.85
C57L/J m 29.31 5.1851 39.49 19.13
C58/J f 6.3667 5.4656 17.0974 0.0
C58/J m 6.6111 5.4656 17.3418 0.0
CAST/EiJ f 31.6545 4.9438 41.3608 21.9483
CAST/EiJ m 28.06 5.1851 38.24 17.88
CBA/J f 39.87 5.1851 50.05 29.69
CBA/J m 40.49 5.1851 50.67 30.31
CE/J f 10.6 5.4656 21.3307 0.0
CE/J m 12.5375 5.7972 23.9191 1.1559
CZECHII/EiJ f 20.3556 5.4656 31.0863 9.6249
CZECHII/EiJ m 23.8 5.1851 33.98 13.62
DBA/2J f 22.98 5.1851 33.16 12.8
DBA/2J m 35.67 5.1851 45.85 25.49
FVB/NJ f 25.06 5.1851 35.24 14.88
FVB/NJ m 17.58 5.1851 27.76 7.4
I/LnJ f 23.04 5.1851 33.22 12.86
I/LnJ m 31.32 5.1851 41.5 21.14
JF1/MsJ f 63.13 5.1851 73.31 52.95
JF1/MsJ m 55.04 5.1851 65.22 44.86
KK/HlJ f 14.0 5.1851 24.18 3.82
KK/HlJ m 9.38 5.1851 19.56 0.0
LP/J f 38.15 5.1851 48.33 27.97
LP/J m 40.52 5.1851 50.7 30.34
MA/MyJ f 65.475 5.7972 76.8566 54.0934
MA/MyJ m 48.0 4.2336 56.312 39.688
MOLF/EiJ f 30.7111 5.4656 41.4418 19.9804
MOLF/EiJ m 34.63 5.1851 44.81 24.45
MSM/MsJ f 28.52 5.1851 38.7 18.34
MSM/MsJ m 45.23 5.1851 55.41 35.05
NOD/ShiLtJ f 21.46 5.1851 31.64 11.28
NOD/ShiLtJ m 24.32 5.1851 34.5 14.14
NON/ShiLtJ f 27.33 5.1851 37.51 17.15
NON/ShiLtJ m 22.72 5.1851 32.9 12.54
NZB/BlNJ f 46.69 5.1851 56.87 36.51
NZB/BlNJ m 38.37 5.1851 48.55 28.19
NZW/LacJ f 45.02 5.1851 55.2 34.84
NZW/LacJ m 32.23 5.1851 42.41 22.05
PERA/EiJ f 41.25 5.1851 51.43 31.07
PERA/EiJ m 18.07 5.1851 28.25 7.89
PL/J f 13.19 5.1851 23.37 3.01
PL/J m 14.6 5.1851 24.78 4.42
PWK/PhJ f 73.35 5.1851 83.53 63.17
PWK/PhJ m 87.02 5.1851 97.2 76.84
RIIIS/J f 43.26 5.1851 53.44 33.08
RIIIS/J m 32.87 5.1851 43.05 22.69
SEA/GnJ f 19.55 5.1851 29.73 9.37
SEA/GnJ m 28.06 5.1851 38.24 17.88
SJL/J f 24.23 5.1851 34.41 14.05
SJL/J m 16.5 5.1851 26.68 6.32
SM/J f 47.25 5.1851 57.43 37.07
SM/J m 17.89 5.1851 28.07 7.71
SPRET/EiJ f 32.8556 5.4656 43.5863 22.1249
SPRET/EiJ m 23.0 7.3329 37.3968 8.6032
SWR/J f 26.4 5.1851 36.58 16.22
SWR/J m 26.7111 5.4656 37.4418 15.9804
WSB/EiJ f 25.85 5.1851 36.03 15.67
WSB/EiJ m 21.68 5.1851 31.86 11.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 39.3828 3.7669 46.7784 31.9871
A/J both 48.41 3.6664 55.6084 41.2116
AKR/J both 25.455 3.7669 32.8506 18.0594
BALB/cByJ both 44.5522 3.7669 51.9479 37.1566
BTBR T+ Itpr3tf/J both 61.935 3.6664 69.1334 54.7366
BUB/BnJ both 35.3978 3.7669 42.7934 28.0021
C3H/HeJ both 50.44 3.6664 57.6384 43.2416
C57BL/10J both 18.71 3.6664 25.9084 11.5116
C57BL/6J both 19.6333 3.8648 27.2211 12.0456
C57BLKS/J both 43.4313 3.8889 51.0663 35.7962
C57BR/cdJ both 12.2438 3.1066 18.3432 6.1445
C57L/J both 34.17 3.6664 41.3684 26.9716
C58/J both 6.4889 3.8648 14.0766 0.0
CAST/EiJ both 29.8573 3.5821 36.8901 22.8244
CBA/J both 40.18 3.6664 47.3784 32.9816
CE/J both 11.5687 3.9837 19.39 3.7475
CZECHII/EiJ both 22.0778 3.7669 29.4734 14.6821
DBA/2J both 29.325 3.6664 36.5234 22.1266
FVB/NJ both 21.32 3.6664 28.5184 14.1216
I/LnJ both 27.18 3.6664 34.3784 19.9816
JF1/MsJ both 59.085 3.6664 66.2834 51.8866
KK/HlJ both 11.69 3.6664 18.8884 4.4916
LP/J both 39.335 3.6664 46.5334 32.1366
MA/MyJ both 56.7375 3.5893 63.7843 49.6907
MOLF/EiJ both 32.6706 3.7669 40.0662 25.2749
MSM/MsJ both 36.875 3.6664 44.0734 29.6766
NOD/ShiLtJ both 22.89 3.6664 30.0884 15.6916
NON/ShiLtJ both 25.025 3.6664 32.2234 17.8266
NZB/BlNJ both 42.53 3.6664 49.7284 35.3316
NZW/LacJ both 38.625 3.6664 45.8234 31.4266
PERA/EiJ both 29.66 3.6664 36.8584 22.4616
PL/J both 13.895 3.6664 21.0934 6.6966
PWK/PhJ both 80.185 3.6664 87.3834 72.9866
RIIIS/J both 38.065 3.6664 45.2634 30.8666
SEA/GnJ both 23.805 3.6664 31.0034 16.6066
SJL/J both 20.365 3.6664 27.5634 13.1666
SM/J both 32.57 3.6664 39.7684 25.3716
SPRET/EiJ both 27.9278 4.5729 36.9057 18.9498
SWR/J both 26.5556 3.7669 33.9512 19.1599
WSB/EiJ both 23.765 3.6664 30.9634 16.5666




  GWAS USING LINEAR MIXED MODELS