Project measure / variable:   Tordoff3   CaLa_pref25

ID, description, units MPD:10312   CaLa_pref25   preference for CaLa (calcium lactate) solutions   [%]  concentration 25 mM  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 10-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff3 - preference for CaLa (calcium lactate) solutions concentration 25 mM



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means43.6   % 41.5   %
Median of the strain means44.2   % 42.0   %
SD of the strain means± 16.2 ± 17.4
Coefficient of variation (CV)0.371 0.419
Min–max range of strain means7.28   –   80.7   % 7.47   –   91.3   %
Mean sample size per strain9.8   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 327.1142 327.1142 1.0478 0.3064
strain 39 195311.701 5007.9923 16.041 < 0.0001
sex:strain 39 23277.9512 596.8705 1.9118 0.0008
Residuals 710 221661.997 312.2


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 57.3 24.0   10 7.6 0.419 10.9, 93.3 0.85
129S1/SvImJ m 57.3 21.6   9 7.2 0.377 7.5, 84.3 0.91
A/J f 52.0 11.3   10 3.58 0.218 32.1, 66.2 0.52
A/J m 52.4 15.0   10 4.75 0.287 27.9, 71.2 0.63
AKR/J f 32.2 12.1   9 4.05 0.377 11.2, 50.6 -0.7
AKR/J m 43.4 23.6   10 7.47 0.544 11.3, 78.5 0.11
BALB/cByJ f 56.2 22.0   9 7.34 0.392 22.4, 91.4 0.78
BALB/cByJ m 49.4 18.0   10 5.7 0.365 15.0, 68.8 0.46
BTBR T+ Itpr3tf/J f 62.4 23.4   10 7.41 0.375 19.8, 90.4 1.17
BTBR T+ Itpr3tf/J m 70.3 18.5   10 5.86 0.264 40.7, 94.1 1.66
BUB/BnJ f 56.9 15.2   10 4.8 0.267 33.3, 86.4 0.83
BUB/BnJ m 41.4 15.2   9 5.08 0.368 17.9, 65.0 0.0
C3H/HeJ f 61.8 17.5   10 5.55 0.284 28.9, 88.0 1.13
C3H/HeJ m 50.9 25.3   10 8.0 0.497 9.8, 78.8 0.54
C57BL/10J f 28.5 11.4   10 3.59 0.399 12.2, 48.8 -0.93
C57BL/10J m 19.7 16.4   10 5.17 0.829 6.5, 53.8 -1.25
C57BL/6J f 36.2 12.7   9 4.23 0.351 17.7, 58.3 -0.46
C57BL/6J m 31.9 12.5   9 4.16 0.391 14.3, 52.8 -0.55
C57BLKS/J f 49.5 7.32   10 2.31 0.148 34.5, 59.1 0.37
C57BLKS/J m 49.6 12.0   8 4.23 0.241 31.5, 68.2 0.47
C57BR/cdJ f 20.1 18.6   15 4.79 0.925 2.1, 65.7 -1.45
C57BR/cdJ m 15.5 9.76   13 2.71 0.629 4.6, 32.4 -1.49
C57L/J f 46.9 18.8   10 5.94 0.401 19.1, 76.3 0.21
C57L/J m 36.3 11.3   10 3.58 0.311 8.2, 46.8 -0.3
C58/J f 7.28 9.13   9 3.04 1.25 0.8, 31.0 -2.25
C58/J m 7.47 2.78   9 0.928 0.373 3.8, 11.0 -1.96
CAST/EiJ f 39.4 11.7   11 3.51 0.296 12.9, 59.3 -0.26
CAST/EiJ m 40.4 10.6   10 3.34 0.262 19.0, 50.9 -0.06
CBA/J f 58.3 17.8   10 5.63 0.305 26.8, 75.7 0.91
CBA/J m 46.4 13.0   10 4.11 0.28 23.8, 65.2 0.28
CE/J f 16.1 16.8   9 5.62 1.05 1.0, 54.9 -1.7
CE/J m 15.0 11.6   8 4.12 0.775 3.7, 39.8 -1.52
CZECHII/EiJ f 34.8 32.5   9 10.8 0.936 6.3, 95.2 -0.54
CZECHII/EiJ m 42.0 26.5   10 8.39 0.632 10.0, 79.6 0.03
DBA/2J f 31.7 12.4   10 3.91 0.39 8.1, 47.9 -0.73
DBA/2J m 50.1 13.7   10 4.32 0.272 27.3, 66.7 0.5
FVB/NJ f 30.7 16.9   10 5.35 0.55 5.9, 59.0 -0.8
FVB/NJ m 17.4 6.65   10 2.1 0.382 10.4, 27.1 -1.39
I/LnJ f 29.5 12.0   10 3.78 0.405 10.0, 46.0 -0.87
I/LnJ m 44.0 19.8   10 6.25 0.449 8.7, 72.9 0.15
JF1/MsJ f 52.0 19.0   10 5.99 0.364 10.4, 83.9 0.52
JF1/MsJ m 60.8 19.0   10 6.01 0.313 31.1, 80.0 1.11
KK/HlJ f 29.1 15.0   10 4.73 0.513 5.6, 47.7 -0.9
KK/HlJ m 22.7 25.1   10 7.93 1.1 2.8, 73.3 -1.08
LP/J f 65.3 15.2   10 4.81 0.233 33.3, 80.6 1.35
LP/J m 57.8 22.7   10 7.17 0.392 16.7, 90.2 0.94
MA/MyJ f 80.7 18.0   8 6.36 0.223 42.4, 97.1 2.3
MA/MyJ m 70.4 24.2   15 6.25 0.344 12.7, 95.6 1.67
MOLF/EiJ f 49.7 16.9   9 5.63 0.34 23.4, 78.2 0.38
MOLF/EiJ m 62.5 16.8   10 5.31 0.269 34.1, 81.4 1.21
MSM/MsJ f 46.8 24.8   10 7.85 0.531 17.9, 93.0 0.2
MSM/MsJ m 58.5 26.2   10 8.28 0.447 7.0, 91.7 0.98
NOD/ShiLtJ f 36.4 25.1   10 7.95 0.69 5.5, 79.8 -0.44
NOD/ShiLtJ m 27.3 16.1   10 5.08 0.589 7.6, 56.0 -0.82
NON/ShiLtJ f 42.2 12.9   10 4.08 0.306 23.3, 59.7 -0.08
NON/ShiLtJ m 33.3 12.7   10 4.0 0.38 13.2, 51.3 -0.47
NZB/BlNJ f 46.1 6.19   10 1.96 0.134 37.2, 55.2 0.16
NZB/BlNJ m 47.3 10.4   10 3.3 0.22 27.9, 59.8 0.34
NZW/LacJ f 50.8 17.9   10 5.67 0.353 12.2, 69.8 0.45
NZW/LacJ m 32.1 21.4   10 6.78 0.668 7.4, 71.6 -0.54
PERA/EiJ f 52.5 16.4   10 5.18 0.312 34.1, 82.0 0.55
PERA/EiJ m 32.5 21.8   10 6.88 0.67 10.0, 80.4 -0.52
PL/J f 20.8 11.8   10 3.75 0.569 5.3, 36.5 -1.41
PL/J m 24.7 12.9   10 4.09 0.524 8.3, 46.1 -0.96
PWK/PhJ f 77.0 16.5   10 5.21 0.214 47.2, 92.6 2.07
PWK/PhJ m 91.3 1.67   10 0.528 0.0183 88.9, 94.7 2.87
RIIIS/J f 59.1 14.4   10 4.56 0.244 36.5, 84.0 0.96
RIIIS/J m 48.6 15.6   10 4.93 0.321 22.2, 72.1 0.41
SEA/GnJ f 24.7 17.7   10 5.61 0.719 5.7, 61.5 -1.17
SEA/GnJ m 37.2 12.3   10 3.88 0.33 22.2, 54.1 -0.25
SJL/J f 32.4 14.0   10 4.41 0.43 11.8, 53.0 -0.69
SJL/J m 29.5 16.6   10 5.26 0.564 6.9, 50.7 -0.69
SM/J f 56.3 26.9   10 8.5 0.477 6.3, 90.2 0.79
SM/J m 26.2 21.7   10 6.86 0.828 6.9, 61.8 -0.88
SPRET/EiJ f 38.3 21.2   9 7.06 0.552 15.9, 83.7 -0.33
SPRET/EiJ m 25.5 10.7   5 4.78 0.419 14.3, 39.2 -0.92
SWR/J f 39.0 21.5   10 6.81 0.552 4.1, 75.0 -0.28
SWR/J m 47.2 17.8   9 5.92 0.376 23.8, 84.9 0.33
WSB/EiJ f 35.6 16.0   10 5.05 0.449 7.8, 54.7 -0.49
WSB/EiJ m 42.0 26.9   10 8.5 0.64 10.7, 87.8 0.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 57.32 5.5875 68.29 46.35
129S1/SvImJ m 57.2667 5.8897 68.83 45.7033
A/J f 51.95 5.5875 62.92 40.98
A/J m 52.35 5.5875 63.32 41.38
AKR/J f 32.2222 5.8897 43.7856 20.6589
AKR/J m 43.41 5.5875 54.38 32.44
BALB/cByJ f 56.2 5.8897 67.7634 44.6366
BALB/cByJ m 49.37 5.5875 60.34 38.4
BTBR T+ Itpr3tf/J f 62.44 5.5875 73.41 51.47
BTBR T+ Itpr3tf/J m 70.32 5.5875 81.29 59.35
BUB/BnJ f 56.9 5.5875 67.87 45.93
BUB/BnJ m 41.4111 5.8897 52.9745 29.8477
C3H/HeJ f 61.78 5.5875 72.75 50.81
C3H/HeJ m 50.87 5.5875 61.84 39.9
C57BL/10J f 28.5 5.5875 39.47 17.53
C57BL/10J m 19.74 5.5875 30.71 8.77
C57BL/6J f 36.2111 5.8897 47.7745 24.6477
C57BL/6J m 31.9333 5.8897 43.4967 20.37
C57BLKS/J f 49.48 5.5875 60.45 38.51
C57BLKS/J m 49.5625 6.247 61.8273 37.2977
C57BR/cdJ f 20.0667 4.5622 29.0236 11.1097
C57BR/cdJ m 15.5154 4.9005 25.1367 5.8941
C57L/J f 46.86 5.5875 57.83 35.89
C57L/J m 36.33 5.5875 47.3 25.36
C58/J f 7.2778 5.8897 18.8411 0.0
C58/J m 7.4667 5.8897 19.03 0.0
CAST/EiJ f 39.3909 5.3275 49.8504 28.9315
CAST/EiJ m 40.4 5.5875 51.37 29.43
CBA/J f 58.32 5.5875 69.29 47.35
CBA/J m 46.44 5.5875 57.41 35.47
CE/J f 16.0778 5.8897 27.6411 4.5144
CE/J m 15.0375 6.247 27.3023 2.7727
CZECHII/EiJ f 34.7556 5.8897 46.3189 23.1922
CZECHII/EiJ m 41.98 5.5875 52.95 31.01
DBA/2J f 31.7 5.5875 42.67 20.73
DBA/2J m 50.15 5.5875 61.12 39.18
FVB/NJ f 30.74 5.5875 41.71 19.77
FVB/NJ m 17.4 5.5875 28.37 6.43
I/LnJ f 29.48 5.5875 40.45 18.51
I/LnJ m 43.95 5.5875 54.92 32.98
JF1/MsJ f 52.05 5.5875 63.02 41.08
JF1/MsJ m 60.76 5.5875 71.73 49.79
KK/HlJ f 29.15 5.5875 40.12 18.18
KK/HlJ m 22.74 5.5875 33.71 11.77
LP/J f 65.28 5.5875 76.25 54.31
LP/J m 57.82 5.5875 68.79 46.85
MA/MyJ f 80.7375 6.247 93.0023 68.4727
MA/MyJ m 70.4467 4.5622 79.4036 61.4897
MOLF/EiJ f 49.7333 5.8897 61.2967 38.17
MOLF/EiJ m 62.53 5.5875 73.5 51.56
MSM/MsJ f 46.77 5.5875 57.74 35.8
MSM/MsJ m 58.52 5.5875 69.49 47.55
NOD/ShiLtJ f 36.4 5.5875 47.37 25.43
NOD/ShiLtJ m 27.27 5.5875 38.24 16.3
NON/ShiLtJ f 42.18 5.5875 53.15 31.21
NON/ShiLtJ m 33.34 5.5875 44.31 22.37
NZB/BlNJ f 46.11 5.5875 57.08 35.14
NZB/BlNJ m 47.34 5.5875 58.31 36.37
NZW/LacJ f 50.83 5.5875 61.8 39.86
NZW/LacJ m 32.08 5.5875 43.05 21.11
PERA/EiJ f 52.5 5.5875 63.47 41.53
PERA/EiJ m 32.5 5.5875 43.47 21.53
PL/J f 20.83 5.5875 31.8 9.86
PL/J m 24.68 5.5875 35.65 13.71
PWK/PhJ f 76.95 5.5875 87.92 65.98
PWK/PhJ m 91.28 5.5875 102.25 80.31
RIIIS/J f 59.1 5.5875 70.07 48.13
RIIIS/J m 48.56 5.5875 59.53 37.59
SEA/GnJ f 24.69 5.5875 35.66 13.72
SEA/GnJ m 37.22 5.5875 48.19 26.25
SJL/J f 32.43 5.5875 43.4 21.46
SJL/J m 29.47 5.5875 40.44 18.5
SM/J f 56.29 5.5875 67.26 45.32
SM/J m 26.19 5.5875 37.16 15.22
SPRET/EiJ f 38.3222 5.8897 49.8856 26.7589
SPRET/EiJ m 25.54 7.9019 41.0539 10.0261
SWR/J f 39.03 5.5875 50.0 28.06
SWR/J m 47.2111 5.8897 58.7745 35.6477
WSB/EiJ f 35.59 5.5875 46.56 24.62
WSB/EiJ m 41.97 5.5875 52.94 31.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 57.2933 4.0592 65.2628 49.3238
A/J both 52.15 3.9509 59.9069 44.3931
AKR/J both 37.8161 4.0592 45.7856 29.8466
BALB/cByJ both 52.785 4.0592 60.7545 44.8155
BTBR T+ Itpr3tf/J both 66.38 3.9509 74.1369 58.6231
BUB/BnJ both 49.1556 4.0592 57.1251 41.1861
C3H/HeJ both 56.325 3.9509 64.0819 48.5681
C57BL/10J both 24.12 3.9509 31.8769 16.3631
C57BL/6J both 34.0722 4.1647 42.2488 25.8957
C57BLKS/J both 49.5213 4.1906 57.7487 41.2938
C57BR/cdJ both 17.791 3.3477 24.3636 11.2184
C57L/J both 41.595 3.9509 49.3519 33.8381
C58/J both 7.3722 4.1647 15.5488 0.0
CAST/EiJ both 39.8955 3.8601 47.4741 32.3169
CBA/J both 52.38 3.9509 60.1369 44.6231
CE/J both 15.5576 4.2928 23.9858 7.1295
CZECHII/EiJ both 38.3678 4.0592 46.3373 30.3983
DBA/2J both 40.925 3.9509 48.6819 33.1681
FVB/NJ both 24.07 3.9509 31.8269 16.3131
I/LnJ both 36.715 3.9509 44.4719 28.9581
JF1/MsJ both 56.405 3.9509 64.1619 48.6481
KK/HlJ both 25.945 3.9509 33.7019 18.1881
LP/J both 61.55 3.9509 69.3069 53.7931
MA/MyJ both 75.5921 3.8678 83.1857 67.9985
MOLF/EiJ both 56.1317 4.0592 64.1012 48.1622
MSM/MsJ both 52.645 3.9509 60.4019 44.8881
NOD/ShiLtJ both 31.835 3.9509 39.5919 24.0781
NON/ShiLtJ both 37.76 3.9509 45.5169 30.0031
NZB/BlNJ both 46.725 3.9509 54.4819 38.9681
NZW/LacJ both 41.455 3.9509 49.2119 33.6981
PERA/EiJ both 42.5 3.9509 50.2569 34.7431
PL/J both 22.755 3.9509 30.5119 14.9981
PWK/PhJ both 84.115 3.9509 91.8719 76.3581
RIIIS/J both 53.83 3.9509 61.5869 46.0731
SEA/GnJ both 30.955 3.9509 38.7119 23.1981
SJL/J both 30.95 3.9509 38.7069 23.1931
SM/J both 41.24 3.9509 48.9969 33.4831
SPRET/EiJ both 31.9311 4.9277 41.6057 22.2565
SWR/J both 43.1206 4.0592 51.0901 35.1511
WSB/EiJ both 38.78 3.9509 46.5369 31.0231




  GWAS USING LINEAR MIXED MODELS