Project measure / variable:   Tordoff3   CaLa_pref7

ID, description, units MPD:10311   CaLa_pref7   preference for CaLa (calcium lactate) solutions   [%]  concentration 7.5 mM  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 10-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff3 - preference for CaLa (calcium lactate) solutions concentration 7.5 mM



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means47.3   % 45.2   %
Median of the strain means46.0   % 43.9   %
SD of the strain means± 14.9 ± 16.0
Coefficient of variation (CV)0.314 0.353
Min–max range of strain means9.40   –   84.3   % 13.5   –   80.2   %
Mean sample size per strain9.8   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 217.372 217.372 0.7223 0.3957
strain 39 167397.2379 4292.2369 14.2629 < 0.0001
sex:strain 39 15993.7466 410.0961 1.3627 0.072
Residuals 710 213665.2574 300.937


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 59.1 18.5   10 5.83 0.312 15.7, 80.3 0.8
129S1/SvImJ m 57.4 22.4   9 7.47 0.391 14.0, 85.7 0.76
A/J f 55.2 14.1   10 4.47 0.256 30.6, 76.8 0.53
A/J m 52.5 15.0   10 4.75 0.286 24.2, 75.3 0.46
AKR/J f 40.4 15.2   9 5.07 0.376 11.7, 62.3 -0.46
AKR/J m 44.0 25.6   10 8.1 0.582 14.0, 79.3 -0.08
BALB/cByJ f 62.8 13.8   9 4.61 0.22 39.2, 81.4 1.04
BALB/cByJ m 60.8 14.6   10 4.63 0.241 40.0, 81.5 0.98
BTBR T+ Itpr3tf/J f 56.9 17.8   10 5.64 0.313 28.2, 83.8 0.65
BTBR T+ Itpr3tf/J m 68.4 15.7   10 4.95 0.229 38.6, 96.1 1.45
BUB/BnJ f 62.5 15.3   10 4.83 0.245 29.9, 87.3 1.02
BUB/BnJ m 43.8 10.2   9 3.41 0.233 30.5, 59.2 -0.09
C3H/HeJ f 60.8 15.1   10 4.79 0.249 37.8, 83.3 0.91
C3H/HeJ m 68.7 15.2   10 4.82 0.222 37.3, 86.3 1.47
C57BL/10J f 39.2 16.2   10 5.14 0.414 15.6, 63.1 -0.54
C57BL/10J m 20.3 13.4   10 4.24 0.661 10.3, 54.2 -1.56
C57BL/6J f 46.3 9.86   9 3.29 0.213 27.8, 58.5 -0.07
C57BL/6J m 39.6 11.6   9 3.88 0.294 24.2, 56.6 -0.35
C57BLKS/J f 47.7 9.57   10 3.03 0.2 31.8, 62.0 0.03
C57BLKS/J m 42.6 10.4   8 3.68 0.244 22.2, 53.7 -0.16
C57BR/cdJ f 25.0 12.1   15 3.11 0.482 8.7, 46.6 -1.5
C57BR/cdJ m 24.6 15.0   13 4.16 0.609 5.3, 67.3 -1.29
C57L/J f 48.8 12.8   10 4.03 0.261 28.2, 69.5 0.1
C57L/J m 32.1 13.4   10 4.25 0.419 11.9, 58.1 -0.82
C58/J f 9.4 5.58   9 1.86 0.594 2.5, 19.0 -2.55
C58/J m 13.5 14.8   9 4.92 1.09 3.3, 50.2 -1.99
CAST/EiJ f 41.1 11.6   11 3.49 0.281 12.1, 52.5 -0.42
CAST/EiJ m 43.3 12.8   10 4.04 0.295 23.6, 64.9 -0.12
CBA/J f 63.4 15.2   10 4.81 0.24 42.6, 86.0 1.08
CBA/J m 54.1 20.1   10 6.34 0.371 11.6, 81.8 0.56
CE/J f 23.6 20.2   9 6.73 0.857 5.2, 55.9 -1.59
CE/J m 20.4 14.5   8 5.11 0.71 6.8, 54.8 -1.56
CZECHII/EiJ f 41.4 28.1   9 9.36 0.678 13.8, 85.2 -0.4
CZECHII/EiJ m 57.5 25.3   10 8.01 0.44 10.6, 88.7 0.77
DBA/2J f 45.8 20.9   10 6.61 0.457 21.5, 81.6 -0.1
DBA/2J m 57.0 11.8   10 3.73 0.207 36.5, 67.6 0.74
FVB/NJ f 34.8 17.6   10 5.58 0.507 9.8, 59.5 -0.84
FVB/NJ m 32.2 19.7   10 6.22 0.61 13.0, 69.2 -0.82
I/LnJ f 35.3 15.1   10 4.78 0.428 19.0, 61.0 -0.81
I/LnJ m 41.8 14.1   10 4.45 0.336 26.2, 68.1 -0.21
JF1/MsJ f 60.1 17.0   10 5.39 0.284 35.4, 85.7 0.86
JF1/MsJ m 54.8 19.6   10 6.19 0.357 21.7, 81.3 0.6
KK/HlJ f 32.0 22.2   10 7.03 0.694 11.3, 72.2 -1.03
KK/HlJ m 24.1 16.7   10 5.28 0.691 5.6, 50.8 -1.32
LP/J f 67.7 17.5   10 5.55 0.259 36.4, 89.5 1.37
LP/J m 62.4 24.1   10 7.62 0.386 9.5, 89.9 1.08
MA/MyJ f 84.3 8.21   8 2.9 0.0974 72.8, 96.6 2.49
MA/MyJ m 74.2 14.9   15 3.85 0.201 46.8, 93.8 1.81
MOLF/EiJ f 59.5 11.0   9 3.65 0.184 42.6, 82.1 0.82
MOLF/EiJ m 57.2 15.1   10 4.78 0.264 28.9, 80.7 0.75
MSM/MsJ f 40.4 26.8   10 8.49 0.665 4.9, 81.6 -0.46
MSM/MsJ m 56.6 23.2   10 7.32 0.409 8.0, 90.2 0.71
NOD/ShiLtJ f 32.0 19.4   10 6.12 0.605 6.1, 62.4 -1.03
NOD/ShiLtJ m 33.5 18.6   10 5.88 0.554 8.0, 61.9 -0.73
NON/ShiLtJ f 45.7 9.32   10 2.95 0.204 30.8, 60.0 -0.11
NON/ShiLtJ m 37.5 11.6   10 3.67 0.31 24.3, 60.4 -0.48
NZB/BlNJ f 49.8 6.32   10 2.0 0.127 39.8, 60.6 0.17
NZB/BlNJ m 47.0 10.1   10 3.19 0.215 27.5, 59.5 0.11
NZW/LacJ f 45.8 15.4   10 4.86 0.336 22.4, 67.0 -0.1
NZW/LacJ m 30.3 17.3   10 5.46 0.57 10.2, 59.4 -0.94
PERA/EiJ f 51.8 23.6   10 7.46 0.455 15.4, 89.3 0.3
PERA/EiJ m 51.5 29.7   10 9.4 0.578 13.0, 90.4 0.39
PL/J f 31.9 15.3   10 4.84 0.479 9.7, 53.0 -1.04
PL/J m 36.8 14.1   10 4.45 0.383 15.6, 56.8 -0.53
PWK/PhJ f 76.4 18.6   10 5.89 0.244 36.4, 93.5 1.96
PWK/PhJ m 80.2 25.9   10 8.21 0.323 6.9, 92.4 2.19
RIIIS/J f 56.5 7.62   10 2.41 0.135 43.9, 64.7 0.62
RIIIS/J m 57.2 13.3   10 4.2 0.232 26.7, 71.9 0.75
SEA/GnJ f 32.6 16.1   10 5.1 0.495 5.9, 53.8 -0.99
SEA/GnJ m 43.2 13.2   10 4.18 0.306 19.7, 59.6 -0.13
SJL/J f 36.2 19.8   10 6.27 0.547 10.1, 63.6 -0.75
SJL/J m 27.6 17.4   10 5.49 0.629 7.9, 56.7 -1.1
SM/J f 58.5 26.1   10 8.27 0.447 13.6, 85.1 0.75
SM/J m 46.7 30.4   10 9.6 0.651 9.4, 95.3 0.09
SPRET/EiJ f 45.3 15.4   9 5.13 0.339 22.7, 66.0 -0.13
SPRET/EiJ m 24.9 12.6   5 5.65 0.508 4.9, 38.8 -1.27
SWR/J f 49.5 25.3   10 8.01 0.512 8.0, 84.3 0.15
SWR/J m 58.5 14.6   9 4.87 0.25 40.4, 89.0 0.83
WSB/EiJ f 35.8 16.6   10 5.24 0.463 6.7, 49.1 -0.77
WSB/EiJ m 30.4 17.7   10 5.6 0.582 9.2, 60.3 -0.93


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 59.12 5.4858 69.8903 48.3497
129S1/SvImJ m 57.3778 5.7825 68.7306 46.0249
A/J f 55.24 5.4858 66.0103 44.4697
A/J m 52.5 5.4858 63.2703 41.7297
AKR/J f 40.4111 5.7825 51.764 29.0582
AKR/J m 44.01 5.4858 54.7803 33.2397
BALB/cByJ f 62.8111 5.7825 74.164 51.4582
BALB/cByJ m 60.8 5.4858 71.5703 50.0297
BTBR T+ Itpr3tf/J f 56.9 5.4858 67.6703 46.1297
BTBR T+ Itpr3tf/J m 68.4 5.4858 79.1703 57.6297
BUB/BnJ f 62.47 5.4858 73.2403 51.6997
BUB/BnJ m 43.8222 5.7825 55.1751 32.4694
C3H/HeJ f 60.82 5.4858 71.5903 50.0497
C3H/HeJ m 68.71 5.4858 79.4803 57.9397
C57BL/10J f 39.19 5.4858 49.9603 28.4197
C57BL/10J m 20.32 5.4858 31.0903 9.5497
C57BL/6J f 46.2778 5.7825 57.6306 34.9249
C57BL/6J m 39.5778 5.7825 50.9306 28.2249
C57BLKS/J f 47.74 5.4858 58.5103 36.9697
C57BLKS/J m 42.5625 6.1333 54.604 30.521
C57BR/cdJ f 25.0333 4.4791 33.8272 16.2394
C57BR/cdJ m 24.6231 4.8113 34.0692 15.1769
C57L/J f 48.81 5.4858 59.5803 38.0397
C57L/J m 32.12 5.4858 42.8903 21.3497
C58/J f 9.4 5.7825 20.7529 0.0
C58/J m 13.5444 5.7825 24.8973 2.1916
CAST/EiJ f 41.1182 5.2305 51.3872 30.8491
CAST/EiJ m 43.29 5.4858 54.0603 32.5197
CBA/J f 63.36 5.4858 74.1303 52.5897
CBA/J m 54.09 5.4858 64.8603 43.3197
CE/J f 23.5667 5.7825 34.9195 12.2138
CE/J m 20.375 6.1333 32.4165 8.3335
CZECHII/EiJ f 41.4222 5.7825 52.7751 30.0694
CZECHII/EiJ m 57.53 5.4858 68.3003 46.7597
DBA/2J f 45.75 5.4858 56.5203 34.9797
DBA/2J m 57.0 5.4858 67.7703 46.2297
FVB/NJ f 34.8 5.4858 45.5703 24.0297
FVB/NJ m 32.24 5.4858 43.0103 21.4697
I/LnJ f 35.27 5.4858 46.0403 24.4997
I/LnJ m 41.83 5.4858 52.6003 31.0597
JF1/MsJ f 60.09 5.4858 70.8603 49.3197
JF1/MsJ m 54.78 5.4858 65.5503 44.0097
KK/HlJ f 32.01 5.4858 42.7803 21.2397
KK/HlJ m 24.14 5.4858 34.9103 13.3697
LP/J f 67.72 5.4858 78.4903 56.9497
LP/J m 62.35 5.4858 73.1203 51.5797
MA/MyJ f 84.2875 6.1333 96.329 72.246
MA/MyJ m 74.2467 4.4791 83.0406 65.4528
MOLF/EiJ f 59.5444 5.7825 70.8973 48.1916
MOLF/EiJ m 57.21 5.4858 67.9803 46.4397
MSM/MsJ f 40.37 5.4858 51.1403 29.5997
MSM/MsJ m 56.65 5.4858 67.4203 45.8797
NOD/ShiLtJ f 31.97 5.4858 42.7403 21.1997
NOD/ShiLtJ m 33.55 5.4858 44.3203 22.7797
NON/ShiLtJ f 45.72 5.4858 56.4903 34.9497
NON/ShiLtJ m 37.52 5.4858 48.2903 26.7497
NZB/BlNJ f 49.81 5.4858 60.5803 39.0397
NZB/BlNJ m 46.98 5.4858 57.7503 36.2097
NZW/LacJ f 45.77 5.4858 56.5403 34.9997
NZW/LacJ m 30.29 5.4858 41.0603 19.5197
PERA/EiJ f 51.82 5.4858 62.5903 41.0497
PERA/EiJ m 51.46 5.4858 62.2303 40.6897
PL/J f 31.93 5.4858 42.7003 21.1597
PL/J m 36.79 5.4858 47.5603 26.0197
PWK/PhJ f 76.4 5.4858 87.1703 65.6297
PWK/PhJ m 80.22 5.4858 90.9903 69.4497
RIIIS/J f 56.47 5.4858 67.2403 45.6997
RIIIS/J m 57.2 5.4858 67.9703 46.4297
SEA/GnJ f 32.59 5.4858 43.3603 21.8197
SEA/GnJ m 43.23 5.4858 54.0003 32.4597
SJL/J f 36.21 5.4858 46.9803 25.4397
SJL/J m 27.59 5.4858 38.3603 16.8197
SM/J f 58.48 5.4858 69.2503 47.7097
SM/J m 46.65 5.4858 57.4203 35.8797
SPRET/EiJ f 45.3111 5.7825 56.664 33.9582
SPRET/EiJ m 24.86 7.7581 40.0915 9.6285
SWR/J f 49.54 5.4858 60.3103 38.7697
SWR/J m 58.4889 5.7825 69.8418 47.136
WSB/EiJ f 35.82 5.4858 46.5903 25.0497
WSB/EiJ m 30.41 5.4858 41.1803 19.6397


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 58.2489 3.9853 66.0733 50.4245
A/J both 53.87 3.879 61.4857 46.2543
AKR/J both 42.2106 3.9853 50.035 34.3861
BALB/cByJ both 61.8056 3.9853 69.63 53.9811
BTBR T+ Itpr3tf/J both 62.65 3.879 70.2657 55.0343
BUB/BnJ both 53.1461 3.9853 60.9705 45.3217
C3H/HeJ both 64.765 3.879 72.3807 57.1493
C57BL/10J both 29.755 3.879 37.3707 22.1393
C57BL/6J both 42.9278 4.0889 50.9555 34.9001
C57BLKS/J both 45.1512 4.1143 53.229 37.0735
C57BR/cdJ both 24.8282 3.2868 31.2812 18.3753
C57L/J both 40.465 3.879 48.0807 32.8493
C58/J both 11.4722 4.0889 19.4999 3.4445
CAST/EiJ both 42.2041 3.7898 49.6447 34.7635
CBA/J both 58.725 3.879 66.3407 51.1093
CE/J both 21.9708 4.2147 30.2456 13.6961
CZECHII/EiJ both 49.4761 3.9853 57.3005 41.6517
DBA/2J both 51.375 3.879 58.9907 43.7593
FVB/NJ both 33.52 3.879 41.1357 25.9043
I/LnJ both 38.55 3.879 46.1657 30.9343
JF1/MsJ both 57.435 3.879 65.0507 49.8193
KK/HlJ both 28.075 3.879 35.6907 20.4593
LP/J both 65.035 3.879 72.6507 57.4193
MA/MyJ both 79.2671 3.7974 86.7225 71.8117
MOLF/EiJ both 58.3772 3.9853 66.2016 50.5528
MSM/MsJ both 48.51 3.879 56.1257 40.8943
NOD/ShiLtJ both 32.76 3.879 40.3757 25.1443
NON/ShiLtJ both 41.62 3.879 49.2357 34.0043
NZB/BlNJ both 48.395 3.879 56.0107 40.7793
NZW/LacJ both 38.03 3.879 45.6457 30.4143
PERA/EiJ both 51.64 3.879 59.2557 44.0243
PL/J both 34.36 3.879 41.9757 26.7443
PWK/PhJ both 78.31 3.879 85.9257 70.6943
RIIIS/J both 56.835 3.879 64.4507 49.2193
SEA/GnJ both 37.91 3.879 45.5257 30.2943
SJL/J both 31.9 3.879 39.5157 24.2843
SM/J both 52.565 3.879 60.1807 44.9493
SPRET/EiJ both 35.0856 4.838 44.584 25.5871
SWR/J both 54.0144 3.9853 61.8389 46.19
WSB/EiJ both 33.115 3.879 40.7307 25.4993




  GWAS USING LINEAR MIXED MODELS