Project measure / variable:   Tordoff3   CaCl2_pref7

ID, description, units MPD:10308   CaCl2_pref7   preference for CaCl2 (calcium chloride) solutions   [%]  concentration 7.5 mM  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 9-11wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff3 - preference for CaCl2 (calcium chloride) solutions concentration 7.5 mM



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means49.6   % 47.2   %
Median of the strain means47.8   % 48.1   %
SD of the strain means± 13.4 ± 15.1
Coefficient of variation (CV)0.270 0.320
Min–max range of strain means26.1   –   82.5   % 18.1   –   83.9   %
Mean sample size per strain9.8   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 551.8977 551.8977 2.3123 0.1288
strain 39 145057.1255 3719.4135 15.5835 < 0.0001
sex:strain 39 12176.4684 312.2171 1.3081 0.1021
Residuals 710 169459.9983 238.6761


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 50.8 15.7   10 4.96 0.309 33.3, 84.9 0.09
129S1/SvImJ m 49.9 25.8   9 8.59 0.517 13.7, 81.3 0.18
A/J f 48.6 13.6   10 4.29 0.279 22.8, 61.0 -0.08
A/J m 54.7 18.7   10 5.93 0.343 22.8, 75.7 0.5
AKR/J f 49.7 8.69   9 2.9 0.175 37.0, 61.1 0.01
AKR/J m 48.8 20.0   10 6.34 0.411 17.0, 86.2 0.11
BALB/cByJ f 63.3 15.1   9 5.04 0.239 30.0, 81.3 1.02
BALB/cByJ m 55.8 16.9   10 5.33 0.302 13.6, 75.0 0.57
BTBR T+ Itpr3tf/J f 58.2 17.1   10 5.4 0.294 25.4, 86.7 0.64
BTBR T+ Itpr3tf/J m 57.0 11.1   10 3.5 0.194 40.0, 70.6 0.65
BUB/BnJ f 65.8 12.8   10 4.04 0.195 43.8, 83.3 1.21
BUB/BnJ m 54.2 17.4   9 5.81 0.321 18.3, 74.1 0.46
C3H/HeJ f 61.4 25.2   10 7.97 0.41 22.9, 86.6 0.88
C3H/HeJ m 67.9 10.5   10 3.33 0.155 51.6, 85.2 1.37
C57BL/10J f 46.1 13.3   10 4.21 0.289 31.3, 72.6 -0.26
C57BL/10J m 23.1 11.9   10 3.78 0.518 8.5, 48.6 -1.59
C57BL/6J f 41.4 5.74   9 1.91 0.139 34.7, 50.5 -0.61
C57BL/6J m 38.3 12.0   9 4.0 0.313 16.7, 50.0 -0.59
C57BLKS/J f 49.3 6.23   10 1.97 0.126 41.2, 60.0 -0.02
C57BLKS/J m 48.2 13.2   8 4.67 0.274 33.7, 64.5 0.07
C57BR/cdJ f 35.7 9.41   15 2.43 0.263 17.4, 50.4 -1.04
C57BR/cdJ m 36.4 11.3   13 3.14 0.31 20.0, 57.8 -0.71
C57L/J f 42.2 14.9   10 4.71 0.353 24.4, 64.2 -0.55
C57L/J m 45.7 7.14   10 2.26 0.156 29.3, 54.3 -0.1
C58/J f 32.1 27.7   9 9.25 0.863 5.9, 93.8 -1.31
C58/J m 18.2 8.88   9 2.96 0.489 3.5, 32.8 -1.92
CAST/EiJ f 42.3 10.7   11 3.24 0.254 18.2, 52.9 -0.55
CAST/EiJ m 48.0 15.3   10 4.83 0.319 25.4, 74.3 0.05
CBA/J f 63.5 17.5   10 5.53 0.275 31.8, 91.2 1.04
CBA/J m 59.6 18.3   10 5.79 0.307 24.3, 93.1 0.82
CE/J f 36.3 29.1   9 9.69 0.802 5.5, 81.0 -0.99
CE/J m 18.1 10.5   8 3.7 0.577 10.4, 41.4 -1.93
CZECHII/EiJ f 61.1 23.1   9 7.71 0.378 13.0, 88.9 0.86
CZECHII/EiJ m 59.1 15.7   10 4.96 0.265 32.1, 76.5 0.79
DBA/2J f 45.3 16.4   10 5.19 0.362 15.1, 72.3 -0.32
DBA/2J m 60.2 11.2   10 3.53 0.185 44.4, 75.9 0.86
FVB/NJ f 33.1 18.8   10 5.95 0.568 8.6, 57.9 -1.23
FVB/NJ m 29.6 15.6   10 4.93 0.527 -1.16
I/LnJ f 31.9 15.9   10 5.02 0.497 15.5, 66.7 -1.32
I/LnJ m 34.9 8.29   10 2.62 0.237 17.6, 44.0 -0.81
JF1/MsJ f 64.5 11.8   10 3.72 0.182 48.0, 87.2 1.11
JF1/MsJ m 73.3 8.52   10 2.69 0.116 59.3, 84.8 1.73
KK/HlJ f 26.1 12.9   10 4.07 0.492 10.5, 45.9 -1.76
KK/HlJ m 22.1 18.6   10 5.87 0.839 5.3, 62.1 -1.66
LP/J f 77.7 9.91   10 3.13 0.128 65.2, 93.3 2.1
LP/J m 65.9 19.5   10 6.17 0.296 13.0, 78.3 1.24
MA/MyJ f 67.1 15.3   8 5.4 0.228 40.7, 94.4 1.31
MA/MyJ m 64.8 17.1   15 4.43 0.265 34.5, 88.9 1.16
MOLF/EiJ f 57.8 13.2   9 4.41 0.229 39.2, 78.1 0.61
MOLF/EiJ m 55.4 16.7   10 5.27 0.301 12.1, 74.0 0.54
MSM/MsJ f 45.9 23.2   10 7.32 0.505 9.5, 75.5 -0.28
MSM/MsJ m 57.8 12.9   10 4.08 0.224 45.6, 87.2 0.7
NOD/ShiLtJ f 47.0 11.1   10 3.5 0.235 29.0, 68.2 -0.19
NOD/ShiLtJ m 43.1 19.4   10 6.15 0.451 13.4, 85.3 -0.27
NON/ShiLtJ f 50.2 6.9   10 2.18 0.137 40.7, 65.4 0.04
NON/ShiLtJ m 45.2 9.06   10 2.86 0.2 29.2, 54.3 -0.13
NZB/BlNJ f 55.8 6.59   10 2.08 0.118 47.6, 69.2 0.46
NZB/BlNJ m 51.3 5.79   10 1.83 0.113 40.7, 58.6 0.27
NZW/LacJ f 43.4 5.78   10 1.83 0.133 36.3, 52.3 -0.46
NZW/LacJ m 31.0 15.3   10 4.83 0.492 11.0, 53.6 -1.07
PERA/EiJ f 39.6 16.0   10 5.05 0.403 20.9, 74.1 -0.75
PERA/EiJ m 35.9 22.2   10 7.02 0.619 15.8, 88.7 -0.75
PL/J f 36.1 16.5   10 5.2 0.456 14.1, 54.3 -1.01
PL/J m 47.1 15.2   10 4.8 0.322 12.7, 70.0 -0.01
PWK/PhJ f 82.5 11.0   10 3.49 0.134 54.5, 93.3 2.46
PWK/PhJ m 83.9 5.87   10 1.85 0.0699 70.7, 91.7 2.43
RIIIS/J f 63.6 10.9   10 3.44 0.171 50.0, 80.0 1.04
RIIIS/J m 57.9 14.1   10 4.45 0.243 37.3, 77.8 0.71
SEA/GnJ f 35.3 13.7   10 4.34 0.389 12.0, 61.2 -1.07
SEA/GnJ m 44.3 17.0   10 5.39 0.385 24.6, 80.7 -0.19
SJL/J f 39.3 15.1   10 4.76 0.383 18.3, 60.0 -0.77
SJL/J m 36.6 16.2   10 5.11 0.442 9.0, 57.4 -0.7
SM/J f 68.7 10.4   10 3.29 0.152 45.5, 84.8 1.43
SM/J m 58.9 27.6   10 8.74 0.469 14.7, 90.8 0.77
SPRET/EiJ f 49.3 25.9   9 8.64 0.526 12.7, 93.6 -0.02
SPRET/EiJ m 42.1 17.2   5 7.68 0.408 11.8, 54.7 -0.34
SWR/J f 40.2 14.6   10 4.62 0.363 15.1, 58.1 -0.7
SWR/J m 34.6 13.1   9 4.36 0.378 17.0, 59.1 -0.83
WSB/EiJ f 36.2 15.2   10 4.79 0.419 12.0, 64.0 -1.0
WSB/EiJ m 29.3 14.7   10 4.65 0.501 8.8, 53.1 -1.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 50.77 4.8854 60.3617 41.1783
129S1/SvImJ m 49.8778 5.1497 59.9883 39.7673
A/J f 48.58 4.8854 58.1717 38.9883
A/J m 54.66 4.8854 64.2517 45.0683
AKR/J f 49.6556 5.1497 59.766 39.5451
AKR/J m 48.79 4.8854 58.3817 39.1983
BALB/cByJ f 63.3 5.1497 73.4105 53.1895
BALB/cByJ m 55.84 4.8854 65.4317 46.2483
BTBR T+ Itpr3tf/J f 58.16 4.8854 67.7517 48.5683
BTBR T+ Itpr3tf/J m 57.0 4.8854 66.5917 47.4083
BUB/BnJ f 65.76 4.8854 75.3517 56.1683
BUB/BnJ m 54.2333 5.1497 64.3438 44.1228
C3H/HeJ f 61.36 4.8854 70.9517 51.7683
C3H/HeJ m 67.92 4.8854 77.5117 58.3283
C57BL/10J f 46.11 4.8854 55.7017 36.5183
C57BL/10J m 23.06 4.8854 32.6517 13.4683
C57BL/6J f 41.3556 5.1497 51.466 31.2451
C57BL/6J m 38.3111 5.1497 48.4216 28.2006
C57BLKS/J f 49.34 4.8854 58.9317 39.7483
C57BLKS/J m 48.1625 5.4621 58.8863 37.4387
C57BR/cdJ f 35.7067 3.989 43.5382 27.8751
C57BR/cdJ m 36.4462 4.2848 44.8586 28.0337
C57L/J f 42.22 4.8854 51.8117 32.6283
C57L/J m 45.72 4.8854 55.3117 36.1283
C58/J f 32.1444 5.1497 42.2549 22.034
C58/J m 18.1667 5.1497 28.2772 8.0562
CAST/EiJ f 42.2727 4.6581 51.418 33.1274
CAST/EiJ m 47.96 4.8854 57.5517 38.3683
CBA/J f 63.5 4.8854 73.0917 53.9083
CBA/J m 59.62 4.8854 69.2117 50.0283
CE/J f 36.2667 5.1497 46.3772 26.1562
CE/J m 18.15 5.4621 28.8738 7.4262
CZECHII/EiJ f 61.1111 5.1497 71.2216 51.0006
CZECHII/EiJ m 59.15 4.8854 68.7417 49.5583
DBA/2J f 45.28 4.8854 54.8717 35.6883
DBA/2J m 60.24 4.8854 69.8317 50.6483
FVB/NJ f 33.1 4.8854 42.6917 23.5083
FVB/NJ m 29.6 4.8854 39.1917 20.0083
I/LnJ f 31.91 4.8854 41.5017 22.3183
I/LnJ m 34.94 4.8854 44.5317 25.3483
JF1/MsJ f 64.49 4.8854 74.0817 54.8983
JF1/MsJ m 73.3 4.8854 82.8917 63.7083
KK/HlJ f 26.15 4.8854 35.7417 16.5583
KK/HlJ m 22.11 4.8854 31.7017 12.5183
LP/J f 77.66 4.8854 87.2517 68.0683
LP/J m 65.92 4.8854 75.5117 56.3283
MA/MyJ f 67.0875 5.4621 77.8113 56.3637
MA/MyJ m 64.76 3.989 72.5916 56.9284
MOLF/EiJ f 57.7778 5.1497 67.8883 47.6673
MOLF/EiJ m 55.41 4.8854 65.0017 45.8183
MSM/MsJ f 45.9 4.8854 55.4917 36.3083
MSM/MsJ m 57.77 4.8854 67.3617 48.1783
NOD/ShiLtJ f 46.99 4.8854 56.5817 37.3983
NOD/ShiLtJ m 43.11 4.8854 52.7017 33.5183
NON/ShiLtJ f 50.19 4.8854 59.7817 40.5983
NON/ShiLtJ m 45.25 4.8854 54.8417 35.6583
NZB/BlNJ f 55.77 4.8854 65.3617 46.1783
NZB/BlNJ m 51.33 4.8854 60.9217 41.7383
NZW/LacJ f 43.39 4.8854 52.9817 33.7983
NZW/LacJ m 31.04 4.8854 40.6317 21.4483
PERA/EiJ f 39.61 4.8854 49.2017 30.0183
PERA/EiJ m 35.89 4.8854 45.4817 26.2983
PL/J f 36.09 4.8854 45.6817 26.4983
PL/J m 47.11 4.8854 56.7017 37.5183
PWK/PhJ f 82.48 4.8854 92.0717 72.8883
PWK/PhJ m 83.87 4.8854 93.4617 74.2783
RIIIS/J f 63.61 4.8854 73.2017 54.0183
RIIIS/J m 57.88 4.8854 67.4717 48.2883
SEA/GnJ f 35.26 4.8854 44.8517 25.6683
SEA/GnJ m 44.25 4.8854 53.8417 34.6583
SJL/J f 39.34 4.8854 48.9317 29.7483
SJL/J m 36.57 4.8854 46.1617 26.9783
SM/J f 68.66 4.8854 78.2517 59.0683
SM/J m 58.93 4.8854 68.5217 49.3383
SPRET/EiJ f 49.2778 5.1497 59.3883 39.1673
SPRET/EiJ m 42.08 6.9091 55.6446 28.5154
SWR/J f 40.24 4.8854 49.8317 30.6483
SWR/J m 34.6444 5.1497 44.7549 24.534
WSB/EiJ f 36.16 4.8854 45.7517 26.5683
WSB/EiJ m 29.32 4.8854 38.9117 19.7283


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 50.3239 3.5492 57.2921 43.3557
A/J both 51.62 3.4545 58.4023 44.8377
AKR/J both 49.2228 3.5492 56.191 42.2546
BALB/cByJ both 59.57 3.5492 66.5382 52.6018
BTBR T+ Itpr3tf/J both 57.58 3.4545 64.3623 50.7977
BUB/BnJ both 59.9967 3.5492 66.9648 53.0285
C3H/HeJ both 64.64 3.4545 71.4223 57.8577
C57BL/10J both 34.585 3.4545 41.3673 27.8027
C57BL/6J both 39.8333 3.6414 46.9825 32.6841
C57BLKS/J both 48.7513 3.6641 55.945 41.5575
C57BR/cdJ both 36.0764 2.9271 41.8232 30.3296
C57L/J both 43.97 3.4545 50.7523 37.1877
C58/J both 25.1556 3.6414 32.3048 18.0064
CAST/EiJ both 45.1164 3.3751 51.7428 38.49
CBA/J both 61.56 3.4545 68.3423 54.7777
CE/J both 27.2083 3.7535 34.5776 19.8391
CZECHII/EiJ both 60.1306 3.5492 67.0987 53.1624
DBA/2J both 52.76 3.4545 59.5423 45.9777
FVB/NJ both 31.35 3.4545 38.1323 24.5677
I/LnJ both 33.425 3.4545 40.2073 26.6427
JF1/MsJ both 68.895 3.4545 75.6773 62.1127
KK/HlJ both 24.13 3.4545 30.9123 17.3477
LP/J both 71.79 3.4545 78.5723 65.0077
MA/MyJ both 65.9238 3.3818 72.5633 59.2842
MOLF/EiJ both 56.5939 3.5492 63.5621 49.6257
MSM/MsJ both 51.835 3.4545 58.6173 45.0527
NOD/ShiLtJ both 45.05 3.4545 51.8323 38.2677
NON/ShiLtJ both 47.72 3.4545 54.5023 40.9377
NZB/BlNJ both 53.55 3.4545 60.3323 46.7677
NZW/LacJ both 37.215 3.4545 43.9973 30.4327
PERA/EiJ both 37.75 3.4545 44.5323 30.9677
PL/J both 41.6 3.4545 48.3823 34.8177
PWK/PhJ both 83.175 3.4545 89.9573 76.3927
RIIIS/J both 60.745 3.4545 67.5273 53.9627
SEA/GnJ both 39.755 3.4545 46.5373 32.9727
SJL/J both 37.955 3.4545 44.7373 31.1727
SM/J both 63.795 3.4545 70.5773 57.0127
SPRET/EiJ both 45.6789 4.3086 54.1379 37.2198
SWR/J both 37.4422 3.5492 44.4104 30.474
WSB/EiJ both 32.74 3.4545 39.5223 25.9577




  GWAS USING LINEAR MIXED MODELS