Project measure / variable:   Tordoff3   bw_chg

ID, description, units MPD:10307   bw_chg   body weight   [g]  fold change  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 8-10wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Tordoff3 - body weight fold change



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means1.10   g 1.12   g
Median of the strain means1.10   g 1.11   g
SD of the strain means± 0.0718 ± 0.0650
Coefficient of variation (CV)0.0655 0.0581
Min–max range of strain means0.835   –   1.23   g 1.01   –   1.28   g
Mean sample size per strain9.8   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0999 0.0999 13.6682 0.0002
strain 39 1.8305 0.0469 6.4234 < 0.0001
sex:strain 39 1.6663 0.0427 5.847 < 0.0001
Residuals 709 5.1807 0.0073


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.1 0.0354   10 0.0112 0.032 1.06, 1.18 0.06
129S1/SvImJ m 1.09 0.0431   9 0.0144 0.0395 1.02, 1.17 -0.43
A/J f 1.04 0.0976   10 0.0309 0.0939 0.786, 1.15 -0.77
A/J m 1.06 0.0459   10 0.0145 0.0432 0.966, 1.11 -0.9
AKR/J f 1.02 0.164   9 0.0548 0.162 0.658, 1.17 -1.05
AKR/J m 1.11 0.0572   10 0.0181 0.0514 1.02, 1.22 -0.13
BALB/cByJ f 1.06 0.0996   9 0.0332 0.0943 0.857, 1.14 -0.5
BALB/cByJ m 1.11 0.0406   10 0.0128 0.0365 1.06, 1.18 -0.13
BTBR T+ Itpr3tf/J f 1.1 0.039   10 0.0123 0.0354 1.05, 1.17 0.06
BTBR T+ Itpr3tf/J m 1.12 0.0365   10 0.0115 0.0325 1.07, 1.17 0.03
BUB/BnJ f 1.17 0.0447   10 0.0141 0.0381 1.11, 1.25 1.04
BUB/BnJ m 1.11 0.0448   9 0.0149 0.0405 1.05, 1.19 -0.13
C3H/HeJ f 1.12 0.0497   10 0.0157 0.0445 1.05, 1.23 0.34
C3H/HeJ m 1.1 0.0713   10 0.0225 0.0647 0.952, 1.19 -0.28
C57BL/10J f 1.17 0.0438   10 0.0138 0.0373 1.1, 1.25 1.04
C57BL/10J m 1.23 0.046   10 0.0145 0.0375 1.17, 1.33 1.72
C57BL/6J f 1.06 0.0805   9 0.0268 0.0759 0.915, 1.16 -0.5
C57BL/6J m 1.09 0.034   9 0.0113 0.0313 1.03, 1.13 -0.43
C57BLKS/J f 1.08 0.0358   10 0.0113 0.0331 1.04, 1.14 -0.22
C57BLKS/J m 1.08 0.0207   8 0.00732 0.0192 1.05, 1.11 -0.59
C57BR/cdJ f 1.12 0.0382   15 0.00987 0.0341 1.05, 1.19 0.34
C57BR/cdJ m 1.17 0.0699   13 0.0194 0.0598 1.05, 1.26 0.8
C57L/J f 1.07 0.0759   10 0.024 0.0712 0.867, 1.13 -0.36
C57L/J m 1.13 0.0495   10 0.0157 0.0439 1.04, 1.21 0.18
C58/J f 1.11 0.1   9 0.0334 0.0902 0.93, 1.23 0.2
C58/J m 1.05 0.0799   9 0.0266 0.0759 0.889, 1.16 -1.05
CAST/EiJ f 0.996 0.108   10 0.034 0.108 0.725, 1.1 -1.39
CAST/EiJ m 1.07 0.063   10 0.0199 0.0586 0.974, 1.17 -0.74
CBA/J f 1.08 0.0979   10 0.031 0.0904 0.923, 1.24 -0.22
CBA/J m 1.2 0.0579   10 0.0183 0.0483 1.09, 1.28 1.26
CE/J f 0.835 0.216   9 0.0721 0.259 0.565, 1.09 -3.63
CE/J m 1.28 0.0713   8 0.0252 0.0559 1.17, 1.35 2.49
CZECHII/EiJ f 1.2 0.356   9 0.119 0.296 0.958, 2.11 1.45
CZECHII/EiJ m 1.02 0.0483   10 0.0153 0.0472 0.965, 1.12 -1.51
DBA/2J f 1.12 0.135   10 0.0426 0.12 0.748, 1.2 0.34
DBA/2J m 1.11 0.0954   10 0.0302 0.0863 0.986, 1.29 -0.13
FVB/NJ f 1.01 0.0671   10 0.0212 0.0662 0.904, 1.14 -1.19
FVB/NJ m 1.04 0.0333   10 0.0105 0.0321 0.989, 1.09 -1.2
I/LnJ f 1.07 0.0491   10 0.0155 0.0459 0.975, 1.14 -0.36
I/LnJ m 1.05 0.0669   10 0.0211 0.0639 0.968, 1.16 -1.05
JF1/MsJ f 1.06 0.094   10 0.0297 0.0884 0.948, 1.23 -0.5
JF1/MsJ m 1.26 0.0713   10 0.0225 0.0565 1.1, 1.35 2.18
KK/HlJ f 1.11 0.0435   10 0.0138 0.0393 1.05, 1.19 0.2
KK/HlJ m 1.11 0.0864   10 0.0273 0.0776 0.984, 1.32 -0.13
LP/J f 1.05 0.0673   10 0.0213 0.0639 0.969, 1.21 -0.64
LP/J m 1.15 0.0788   10 0.0249 0.0685 1.05, 1.27 0.49
MA/MyJ f 1.12 0.0499   8 0.0176 0.0445 1.06, 1.19 0.34
MA/MyJ m 1.16 0.0872   15 0.0225 0.0753 0.973, 1.31 0.64
MOLF/EiJ f 1.06 0.0708   9 0.0236 0.0668 0.925, 1.16 -0.5
MOLF/EiJ m 1.07 0.0646   10 0.0204 0.0605 0.955, 1.19 -0.74
MSM/MsJ f 1.14 0.0678   10 0.0214 0.0597 0.991, 1.21 0.62
MSM/MsJ m 1.06 0.038   10 0.012 0.0358 1.01, 1.12 -0.9
NOD/ShiLtJ f 1.06 0.103   10 0.0324 0.0968 0.847, 1.16 -0.5
NOD/ShiLtJ m 1.12 0.101   10 0.032 0.0905 0.923, 1.25 0.03
NON/ShiLtJ f 1.23 0.0719   10 0.0227 0.0586 1.11, 1.35 1.87
NON/ShiLtJ m 1.27 0.054   10 0.0171 0.0425 1.17, 1.35 2.33
NZB/BlNJ f 1.2 0.0807   10 0.0255 0.0675 1.04, 1.35 1.45
NZB/BlNJ m 1.13 0.0938   10 0.0297 0.0833 0.946, 1.25 0.18
NZW/LacJ f 1.17 0.0422   10 0.0133 0.036 1.09, 1.24 1.04
NZW/LacJ m 1.12 0.0208   10 0.00657 0.0185 1.09, 1.15 0.03
PERA/EiJ f 1.11 0.0465   10 0.0147 0.0419 1.01, 1.17 0.2
PERA/EiJ m 1.01 0.0733   10 0.0232 0.0729 0.853, 1.08 -1.67
PL/J f 1.07 0.175   10 0.0552 0.164 0.669, 1.23 -0.36
PL/J m 1.17 0.0622   10 0.0197 0.0531 1.1, 1.26 0.8
PWK/PhJ f 1.13 0.0919   10 0.0291 0.081 0.978, 1.33 0.48
PWK/PhJ m 1.1 0.062   10 0.0196 0.0563 0.989, 1.2 -0.28
RIIIS/J f 1.07 0.0423   10 0.0134 0.0396 1.01, 1.14 -0.36
RIIIS/J m 1.09 0.0296   10 0.00936 0.0272 1.04, 1.13 -0.43
SEA/GnJ f 1.19 0.0521   10 0.0165 0.0437 1.1, 1.26 1.31
SEA/GnJ m 1.21 0.039   10 0.0123 0.0323 1.14, 1.28 1.41
SJL/J f 0.993 0.119   10 0.0377 0.12 0.78, 1.13 -1.43
SJL/J m 1.07 0.0459   10 0.0145 0.0428 1.0, 1.17 -0.74
SM/J f 1.11 0.104   10 0.033 0.0937 0.971, 1.25 0.2
SM/J m 1.13 0.0424   10 0.0134 0.0375 1.08, 1.22 0.18
SPRET/EiJ f 1.11 0.0624   9 0.0208 0.0561 0.968, 1.18 0.2
SPRET/EiJ m 1.07 0.146   5 0.0651 0.136 0.811, 1.16 -0.74
SWR/J f 1.1 0.0359   10 0.0114 0.0326 1.05, 1.15 0.06
SWR/J m 1.08 0.0277   9 0.00925 0.0257 1.05, 1.13 -0.59
WSB/EiJ f 1.21 0.136   10 0.0432 0.113 1.05, 1.44 1.59
WSB/EiJ m 1.13 0.0636   10 0.0201 0.0563 1.0, 1.19 0.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.105 0.027 1.1581 1.0519
129S1/SvImJ m 1.0911 0.0285 1.1471 1.0352
A/J f 1.0396 0.027 1.0927 0.9865
A/J m 1.0626 0.027 1.1157 1.0095
AKR/J f 1.0154 0.0285 1.0714 0.9595
AKR/J m 1.113 0.027 1.1661 1.0599
BALB/cByJ f 1.056 0.0285 1.1119 1.0001
BALB/cByJ m 1.114 0.027 1.1671 1.0609
BTBR T+ Itpr3tf/J f 1.101 0.027 1.1541 1.0479
BTBR T+ Itpr3tf/J m 1.122 0.027 1.1751 1.0689
BUB/BnJ f 1.173 0.027 1.2261 1.1199
BUB/BnJ m 1.1056 0.0285 1.1615 1.0496
C3H/HeJ f 1.116 0.027 1.1691 1.0629
C3H/HeJ m 1.1012 0.027 1.1543 1.0481
C57BL/10J f 1.174 0.027 1.2271 1.1209
C57BL/10J m 1.227 0.027 1.2801 1.1739
C57BL/6J f 1.0611 0.0285 1.1171 1.0052
C57BL/6J m 1.0856 0.0285 1.1415 1.0296
C57BLKS/J f 1.082 0.027 1.1351 1.0289
C57BLKS/J m 1.08 0.0302 1.1393 1.0207
C57BR/cdJ f 1.122 0.0221 1.1653 1.0787
C57BR/cdJ m 1.1685 0.0237 1.215 1.1219
C57L/J f 1.0657 0.027 1.1188 1.0126
C57L/J m 1.129 0.027 1.1821 1.0759
C58/J f 1.1119 0.0285 1.1678 1.0559
C58/J m 1.0526 0.0285 1.1085 0.9966
CAST/EiJ f 0.9963 0.027 1.0494 0.9432
CAST/EiJ m 1.0748 0.027 1.1279 1.0217
CBA/J f 1.0833 0.027 1.1364 1.0302
CBA/J m 1.198 0.027 1.2511 1.1449
CE/J f 0.8351 0.0285 0.8911 0.7792
CE/J m 1.275 0.0302 1.3343 1.2157
CZECHII/EiJ f 1.2023 0.0285 1.2583 1.1464
CZECHII/EiJ m 1.0239 0.027 1.077 0.9708
DBA/2J f 1.1208 0.027 1.1739 1.0677
DBA/2J m 1.1056 0.027 1.1587 1.0525
FVB/NJ f 1.0141 0.027 1.0672 0.961
FVB/NJ m 1.0351 0.027 1.0882 0.982
I/LnJ f 1.0695 0.027 1.1226 1.0164
I/LnJ m 1.046 0.027 1.0991 0.9929
JF1/MsJ f 1.0632 0.027 1.1163 1.0101
JF1/MsJ m 1.261 0.027 1.3141 1.2079
KK/HlJ f 1.106 0.027 1.1591 1.0529
KK/HlJ m 1.1124 0.027 1.1655 1.0593
LP/J f 1.0519 0.027 1.105 0.9988
LP/J m 1.151 0.027 1.2041 1.0979
MA/MyJ f 1.12 0.0302 1.1793 1.0607
MA/MyJ m 1.1575 0.0221 1.2009 1.1142
MOLF/EiJ f 1.0594 0.0285 1.1154 1.0035
MOLF/EiJ m 1.0685 0.027 1.1216 1.0154
MSM/MsJ f 1.1361 0.027 1.1892 1.083
MSM/MsJ m 1.063 0.027 1.1161 1.0099
NOD/ShiLtJ f 1.0593 0.027 1.1124 1.0062
NOD/ShiLtJ m 1.1193 0.027 1.1724 1.0662
NON/ShiLtJ f 1.228 0.027 1.2811 1.1749
NON/ShiLtJ m 1.271 0.027 1.3241 1.2179
NZB/BlNJ f 1.196 0.027 1.2491 1.1429
NZB/BlNJ m 1.1266 0.027 1.1797 1.0735
NZW/LacJ f 1.17 0.027 1.2231 1.1169
NZW/LacJ m 1.121 0.027 1.1741 1.0679
PERA/EiJ f 1.111 0.027 1.1641 1.0579
PERA/EiJ m 1.0057 0.027 1.0588 0.9526
PL/J f 1.0653 0.027 1.1184 1.0122
PL/J m 1.17 0.027 1.2231 1.1169
PWK/PhJ f 1.1348 0.027 1.1879 1.0817
PWK/PhJ m 1.1019 0.027 1.155 1.0488
RIIIS/J f 1.069 0.027 1.1221 1.0159
RIIIS/J m 1.089 0.027 1.1421 1.0359
SEA/GnJ f 1.193 0.027 1.2461 1.1399
SEA/GnJ m 1.209 0.027 1.2621 1.1559
SJL/J f 0.993 0.027 1.0461 0.9399
SJL/J m 1.072 0.027 1.1251 1.0189
SM/J f 1.1125 0.027 1.1656 1.0594
SM/J m 1.13 0.027 1.1831 1.0769
SPRET/EiJ f 1.112 0.0285 1.1679 1.0561
SPRET/EiJ m 1.0702 0.0382 1.1453 0.9951
SWR/J f 1.1 0.027 1.1531 1.0469
SWR/J m 1.0778 0.0285 1.1337 1.0218
WSB/EiJ f 1.206 0.027 1.2591 1.1529
WSB/EiJ m 1.13 0.027 1.1831 1.0769


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.0981 0.0196 1.1366 1.0595
A/J both 1.0511 0.0191 1.0886 1.0136
AKR/J both 1.0642 0.0196 1.1028 1.0257
BALB/cByJ both 1.085 0.0196 1.1236 1.0464
BTBR T+ Itpr3tf/J both 1.1115 0.0191 1.149 1.074
BUB/BnJ both 1.1393 0.0196 1.1778 1.1007
C3H/HeJ both 1.1086 0.0191 1.1461 1.0711
C57BL/10J both 1.2005 0.0191 1.238 1.163
C57BL/6J both 1.0733 0.0201 1.1129 1.0338
C57BLKS/J both 1.081 0.0203 1.1208 1.0412
C57BR/cdJ both 1.1452 0.0162 1.177 1.1134
C57L/J both 1.0974 0.0191 1.1349 1.0598
C58/J both 1.0822 0.0201 1.1218 1.0427
CAST/EiJ both 1.0356 0.0191 1.0731 0.998
CBA/J both 1.1407 0.0191 1.1782 1.1031
CE/J both 1.0551 0.0208 1.0958 1.0143
CZECHII/EiJ both 1.1131 0.0196 1.1517 1.0746
DBA/2J both 1.1132 0.0191 1.1507 1.0757
FVB/NJ both 1.0246 0.0191 1.0621 0.9871
I/LnJ both 1.0578 0.0191 1.0953 1.0202
JF1/MsJ both 1.1621 0.0191 1.1996 1.1246
KK/HlJ both 1.1092 0.0191 1.1467 1.0717
LP/J both 1.1015 0.0191 1.139 1.0639
MA/MyJ both 1.1388 0.0187 1.1755 1.102
MOLF/EiJ both 1.064 0.0196 1.1025 1.0254
MSM/MsJ both 1.0996 0.0191 1.1371 1.062
NOD/ShiLtJ both 1.0893 0.0191 1.1268 1.0518
NON/ShiLtJ both 1.2495 0.0191 1.287 1.212
NZB/BlNJ both 1.1613 0.0191 1.1988 1.1238
NZW/LacJ both 1.1455 0.0191 1.183 1.108
PERA/EiJ both 1.0584 0.0191 1.0959 1.0208
PL/J both 1.1177 0.0191 1.1552 1.0801
PWK/PhJ both 1.1184 0.0191 1.1559 1.0808
RIIIS/J both 1.079 0.0191 1.1165 1.0415
SEA/GnJ both 1.201 0.0191 1.2385 1.1635
SJL/J both 1.0325 0.0191 1.07 0.995
SM/J both 1.1213 0.0191 1.1588 1.0837
SPRET/EiJ both 1.0911 0.0238 1.1379 1.0443
SWR/J both 1.0889 0.0196 1.1274 1.0503
WSB/EiJ both 1.168 0.0191 1.2055 1.1305




  GWAS USING LINEAR MIXED MODELS