Project measure / variable:   Tordoff3   bw_end

ID, description, units MPD:10306   bw_end   body weight   [g]  end  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 8-10wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Tordoff3 - body weight end



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means20.6   g 26.7   g
Median of the strain means20.8   g 26.9   g
SD of the strain means± 5.49 ± 6.72
Coefficient of variation (CV)0.267 0.252
Min–max range of strain means10.8   –   39.0   g 12.8   –   43.0   g
Mean sample size per strain9.8   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7423.8317 7423.8317 1593.8751 < 0.0001
strain 39 26683.0168 684.1799 146.8914 < 0.0001
sex:strain 39 1883.2222 48.2877 10.3672 < 0.0001
Residuals 709 3302.3269 4.6577


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 20.8 0.979   10 0.309 0.0471 18.9, 22.1 0.04
129S1/SvImJ m 25.9 1.55   9 0.517 0.0599 23.3, 27.5 -0.12
A/J f 21.5 1.25   10 0.394 0.058 19.5, 23.2 0.17
A/J m 25.6 2.47   10 0.78 0.0962 21.6, 29.9 -0.16
AKR/J f 25.8 3.59   9 1.2 0.139 21.1, 32.3 0.95
AKR/J m 34.4 3.35   10 1.06 0.0973 30.7, 42.8 1.15
BALB/cByJ f 23.3 1.7   9 0.567 0.0729 19.7, 26.2 0.49
BALB/cByJ m 30.1 1.7   10 0.538 0.0566 27.0, 33.1 0.51
BTBR T+ Itpr3tf/J f 27.2 1.3   10 0.412 0.048 25.8, 29.5 1.2
BTBR T+ Itpr3tf/J m 33.9 2.79   10 0.881 0.0822 31.0, 39.0 1.07
BUB/BnJ f 26.8 1.59   10 0.503 0.0594 24.1, 30.2 1.13
BUB/BnJ m 33.9 1.91   9 0.637 0.0565 31.0, 36.9 1.07
C3H/HeJ f 22.7 2.72   10 0.86 0.12 18.4, 28.2 0.39
C3H/HeJ m 29.2 2.02   10 0.639 0.0692 26.7, 33.1 0.37
C57BL/10J f 22.4 1.25   10 0.396 0.0561 20.9, 24.2 0.33
C57BL/10J m 30.7 1.64   10 0.52 0.0536 28.3, 33.3 0.6
C57BL/6J f 21.2 2.32   9 0.775 0.109 18.8, 25.8 0.11
C57BL/6J m 27.7 1.67   9 0.556 0.0601 25.5, 30.7 0.15
C57BLKS/J f 20.5 0.808   10 0.256 0.0394 19.2, 21.8 -0.02
C57BLKS/J m 26.0 1.84   8 0.65 0.0708 23.0, 28.9 -0.1
C57BR/cdJ f 22.5 0.964   15 0.249 0.0428 20.9, 24.3 0.35
C57BR/cdJ m 30.1 2.55   13 0.706 0.0847 25.9, 34.0 0.51
C57L/J f 22.0 1.63   10 0.517 0.0742 19.0, 23.7 0.26
C57L/J m 28.7 3.04   10 0.96 0.106 22.0, 32.6 0.3
C58/J f 20.8 1.58   9 0.525 0.0759 18.5, 24.0 0.04
C58/J m 25.0 0.872   9 0.291 0.0349 23.7, 26.5 -0.25
CAST/EiJ f 12.0 0.625   10 0.198 0.0523 10.7, 12.6 -1.56
CAST/EiJ m 14.8 0.77   10 0.244 0.0522 13.6, 15.8 -1.77
CBA/J f 23.6 2.16   10 0.684 0.0919 20.6, 26.8 0.55
CBA/J m 33.5 3.27   10 1.04 0.0977 27.9, 38.4 1.01
CE/J f 19.0 5.12   9 1.71 0.269 11.5, 27.4 -0.29
CE/J m 35.4 2.06   8 0.728 0.0581 32.9, 39.2 1.3
CZECHII/EiJ f 12.7 3.43   9 1.14 0.27 10.0, 21.3 -1.44
CZECHII/EiJ m 13.7 1.22   10 0.386 0.089 12.4, 15.5 -1.93
DBA/2J f 21.9 1.18   10 0.374 0.0541 20.2, 23.4 0.24
DBA/2J m 29.5 2.88   10 0.911 0.0977 25.9, 34.8 0.42
FVB/NJ f 19.8 2.47   10 0.781 0.124 15.8, 23.3 -0.14
FVB/NJ m 26.9 1.15   10 0.362 0.0426 25.5, 29.0 0.03
I/LnJ f 18.1 0.933   10 0.295 0.0517 16.5, 19.6 -0.45
I/LnJ m 25.7 3.79   10 1.2 0.147 21.5, 34.3 -0.15
JF1/MsJ f 14.5 1.23   10 0.388 0.0847 12.7, 16.5 -1.11
JF1/MsJ m 24.6 2.83   10 0.896 0.115 20.3, 28.8 -0.31
KK/HlJ f 39.0 1.34   10 0.422 0.0342 37.1, 41.5 3.35
KK/HlJ m 38.1 2.79   10 0.882 0.0733 32.4, 42.8 1.7
LP/J f 19.7 1.2   10 0.379 0.0609 18.5, 21.5 -0.16
LP/J m 27.8 3.24   10 1.02 0.116 22.4, 32.7 0.17
MA/MyJ f 21.1 1.57   8 0.557 0.0745 19.2, 24.4 0.09
MA/MyJ m 27.2 2.11   15 0.544 0.0776 22.3, 30.6 0.08
MOLF/EiJ f 12.6 0.521   9 0.174 0.0413 12.0, 13.4 -1.45
MOLF/EiJ m 14.3 0.987   10 0.312 0.0689 12.8, 16.2 -1.84
MSM/MsJ f 10.8 0.427   10 0.135 0.0394 10.1, 11.6 -1.78
MSM/MsJ m 12.8 0.481   10 0.152 0.0377 12.0, 13.3 -2.07
NOD/ShiLtJ f 21.4 2.35   10 0.742 0.11 16.6, 24.0 0.15
NOD/ShiLtJ m 29.9 1.33   10 0.421 0.0445 28.3, 31.5 0.48
NON/ShiLtJ f 30.8 3.79   10 1.2 0.123 24.7, 38.9 1.86
NON/ShiLtJ m 43.0 4.67   10 1.48 0.109 35.2, 49.6 2.43
NZB/BlNJ f 25.3 2.7   10 0.855 0.107 20.3, 29.7 0.86
NZB/BlNJ m 32.2 4.56   10 1.44 0.142 24.7, 38.8 0.82
NZW/LacJ f 28.6 1.38   10 0.437 0.0483 25.4, 30.6 1.46
NZW/LacJ m 30.5 1.68   10 0.531 0.0551 27.7, 33.3 0.57
PERA/EiJ f 20.7 2.57   10 0.811 0.124 17.4, 24.3 0.02
PERA/EiJ m 25.1 1.2   10 0.378 0.0477 23.8, 27.4 -0.24
PL/J f 17.6 1.72   10 0.544 0.0976 14.9, 20.8 -0.54
PL/J m 25.6 2.29   10 0.723 0.0893 22.0, 30.0 -0.16
PWK/PhJ f 14.9 0.967   10 0.306 0.0651 13.3, 16.0 -1.04
PWK/PhJ m 17.4 0.848   10 0.268 0.0488 16.0, 19.1 -1.38
RIIIS/J f 17.5 1.01   10 0.32 0.058 15.5, 18.8 -0.56
RIIIS/J m 22.7 1.97   10 0.624 0.0869 19.1, 25.6 -0.59
SEA/GnJ f 22.1 1.26   10 0.399 0.0573 20.4, 24.2 0.28
SEA/GnJ m 26.5 2.72   10 0.861 0.103 21.6, 30.9 -0.03
SJL/J f 19.6 1.21   10 0.382 0.0614 17.7, 20.7 -0.18
SJL/J m 26.9 2.12   10 0.672 0.0791 24.0, 31.1 0.03
SM/J f 16.8 2.81   10 0.888 0.167 10.2, 19.7 -0.69
SM/J m 22.1 1.74   10 0.551 0.0789 20.3, 25.6 -0.68
SPRET/EiJ f 14.0 1.07   9 0.358 0.0769 12.2, 16.0 -1.2
SPRET/EiJ m 17.6 0.586   5 0.262 0.0332 17.0, 18.5 -1.35
SWR/J f 17.4 0.916   10 0.29 0.0527 16.0, 18.9 -0.58
SWR/J m 24.8 1.19   9 0.398 0.0482 23.0, 26.3 -0.28
WSB/EiJ f 14.4 1.61   10 0.508 0.112 11.0, 16.3 -1.13
WSB/EiJ m 17.6 1.42   10 0.449 0.0808 14.8, 19.7 -1.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 20.77 0.6825 22.1099 19.4301
129S1/SvImJ m 25.8667 0.7194 27.2791 24.4543
A/J f 21.5 0.6825 22.8399 20.1601
A/J m 25.63 0.6825 26.9699 24.2901
AKR/J f 25.8444 0.7194 27.2568 24.4321
AKR/J m 34.41 0.6825 35.7499 33.0701
BALB/cByJ f 23.3444 0.7194 24.7568 21.9321
BALB/cByJ m 30.06 0.6825 31.3999 28.7201
BTBR T+ Itpr3tf/J f 27.19 0.6825 28.5299 25.8501
BTBR T+ Itpr3tf/J m 33.87 0.6825 35.2099 32.5301
BUB/BnJ f 26.76 0.6825 28.0999 25.4201
BUB/BnJ m 33.8556 0.7194 35.2679 32.4432
C3H/HeJ f 22.67 0.6825 24.0099 21.3301
C3H/HeJ m 29.2 0.6825 30.5399 27.8601
C57BL/10J f 22.36 0.6825 23.6999 21.0201
C57BL/10J m 30.69 0.6825 32.0299 29.3501
C57BL/6J f 21.2333 0.7194 22.6457 19.8209
C57BL/6J m 27.7444 0.7194 29.1568 26.3321
C57BLKS/J f 20.53 0.6825 21.8699 19.1901
C57BLKS/J m 25.9875 0.763 27.4856 24.4894
C57BR/cdJ f 22.5333 0.5572 23.6274 21.4393
C57BR/cdJ m 30.0538 0.5986 31.229 28.8787
C57L/J f 22.02 0.6825 23.3599 20.6801
C57L/J m 28.72 0.6825 30.0599 27.3801
C58/J f 20.7778 0.7194 22.1902 19.3654
C58/J m 25.0 0.7194 26.4124 23.5876
CAST/EiJ f 11.97 0.6825 13.3099 10.6301
CAST/EiJ m 14.77 0.6825 16.1099 13.4301
CBA/J f 23.55 0.6825 24.8899 22.2101
CBA/J m 33.5 0.6825 34.8399 32.1601
CE/J f 19.0333 0.7194 20.4457 17.6209
CE/J m 35.4375 0.763 36.9356 33.9394
CZECHII/EiJ f 12.7222 0.7194 14.1346 11.3098
CZECHII/EiJ m 13.73 0.6825 15.0699 12.3901
DBA/2J f 21.87 0.6825 23.2099 20.5301
DBA/2J m 29.5 0.6825 30.8399 28.1601
FVB/NJ f 19.85 0.6825 21.1899 18.5101
FVB/NJ m 26.91 0.6825 28.2499 25.5701
I/LnJ f 18.07 0.6825 19.4099 16.7301
I/LnJ m 25.7 0.6825 27.0399 24.3601
JF1/MsJ f 14.5 0.6825 15.8399 13.1601
JF1/MsJ m 24.65 0.6825 25.9899 23.3101
KK/HlJ f 38.99 0.6825 40.3299 37.6501
KK/HlJ m 38.07 0.6825 39.4099 36.7301
LP/J f 19.69 0.6825 21.0299 18.3501
LP/J m 27.84 0.6825 29.1799 26.5001
MA/MyJ f 21.125 0.763 22.6231 19.6269
MA/MyJ m 27.16 0.5572 28.254 26.066
MOLF/EiJ f 12.6222 0.7194 14.0346 11.2098
MOLF/EiJ m 14.33 0.6825 15.6699 12.9901
MSM/MsJ f 10.84 0.6825 12.1799 9.5001
MSM/MsJ m 12.76 0.6825 14.0999 11.4201
NOD/ShiLtJ f 21.38 0.6825 22.7199 20.0401
NOD/ShiLtJ m 29.93 0.6825 31.2699 28.5901
NON/ShiLtJ f 30.75 0.6825 32.0899 29.4101
NON/ShiLtJ m 43.03 0.6825 44.3699 41.6901
NZB/BlNJ f 25.33 0.6825 26.6699 23.9901
NZB/BlNJ m 32.16 0.6825 33.4999 30.8201
NZW/LacJ f 28.62 0.6825 29.9599 27.2801
NZW/LacJ m 30.48 0.6825 31.8199 29.1401
PERA/EiJ f 20.66 0.6825 21.9999 19.3201
PERA/EiJ m 25.09 0.6825 26.4299 23.7501
PL/J f 17.62 0.6825 18.9599 16.2801
PL/J m 25.6 0.6825 26.9399 24.2601
PWK/PhJ f 14.87 0.6825 16.2099 13.5301
PWK/PhJ m 17.38 0.6825 18.7199 16.0401
RIIIS/J f 17.47 0.6825 18.8099 16.1301
RIIIS/J m 22.71 0.6825 24.0499 21.3701
SEA/GnJ f 22.06 0.6825 23.3999 20.7201
SEA/GnJ m 26.48 0.6825 27.8199 25.1401
SJL/J f 19.64 0.6825 20.9799 18.3001
SJL/J m 26.85 0.6825 28.1899 25.5101
SM/J f 16.78 0.6825 18.1199 15.4401
SM/J m 22.08 0.6825 23.4199 20.7401
SPRET/EiJ f 13.9556 0.7194 15.3679 12.5432
SPRET/EiJ m 17.64 0.9652 19.5349 15.7451
SWR/J f 17.39 0.6825 18.7299 16.0501
SWR/J m 24.7667 0.7194 26.1791 23.3543
WSB/EiJ f 14.37 0.6825 15.7099 13.0301
WSB/EiJ m 17.59 0.6825 18.9299 16.2501


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.3183 0.4958 24.2918 22.3449
A/J both 23.565 0.4826 24.5125 22.6175
AKR/J both 30.1272 0.4958 31.1006 29.1538
BALB/cByJ both 26.7022 0.4958 27.6756 25.7288
BTBR T+ Itpr3tf/J both 30.53 0.4826 31.4775 29.5825
BUB/BnJ both 30.3078 0.4958 31.2812 29.3344
C3H/HeJ both 25.935 0.4826 26.8825 24.9875
C57BL/10J both 26.525 0.4826 27.4725 25.5775
C57BL/6J both 24.4889 0.5087 25.4876 23.4902
C57BLKS/J both 23.2587 0.5119 24.2637 22.2538
C57BR/cdJ both 26.2936 0.4089 27.0964 25.4908
C57L/J both 25.37 0.4826 26.3175 24.4225
C58/J both 22.8889 0.5087 23.8876 21.8902
CAST/EiJ both 13.37 0.4826 14.3175 12.4225
CBA/J both 28.525 0.4826 29.4725 27.5775
CE/J both 27.2354 0.5243 28.2649 26.206
CZECHII/EiJ both 13.2261 0.4958 14.1995 12.2527
DBA/2J both 25.685 0.4826 26.6325 24.7375
FVB/NJ both 23.38 0.4826 24.3275 22.4325
I/LnJ both 21.885 0.4826 22.8325 20.9375
JF1/MsJ both 19.575 0.4826 20.5225 18.6275
KK/HlJ both 38.53 0.4826 39.4775 37.5825
LP/J both 23.765 0.4826 24.7125 22.8175
MA/MyJ both 24.1425 0.4724 25.07 23.215
MOLF/EiJ both 13.4761 0.4958 14.4495 12.5027
MSM/MsJ both 11.8 0.4826 12.7475 10.8525
NOD/ShiLtJ both 25.655 0.4826 26.6025 24.7075
NON/ShiLtJ both 36.89 0.4826 37.8375 35.9425
NZB/BlNJ both 28.745 0.4826 29.6925 27.7975
NZW/LacJ both 29.55 0.4826 30.4975 28.6025
PERA/EiJ both 22.875 0.4826 23.8225 21.9275
PL/J both 21.61 0.4826 22.5575 20.6625
PWK/PhJ both 16.125 0.4826 17.0725 15.1775
RIIIS/J both 20.09 0.4826 21.0375 19.1425
SEA/GnJ both 24.27 0.4826 25.2175 23.3225
SJL/J both 23.245 0.4826 24.1925 22.2975
SM/J both 19.43 0.4826 20.3775 18.4825
SPRET/EiJ both 15.7978 0.6019 16.9795 14.6161
SWR/J both 21.0783 0.4958 22.0518 20.1049
WSB/EiJ both 15.98 0.4826 16.9275 15.0325




  GWAS USING LINEAR MIXED MODELS