MPD: JaxKOMP-EAP measure: genitalia

JaxKOMP-EAP phenotype measure: genitalia_presence

MPD and LIMS short name	genitalia_presence genitalia_presence
Phenotype description	genitalia presence
MPD and LIMS phenotype procedure	observation (SHIRPA) SHIRPA View protocol
MPD measure ID, data type	100410 categorical data
Number of genotypes	2022 genotypes completed with analytics available, both sexes
Age at testing	9wks Early Adult Phenotyping study EAP

Ontology mappings

CATEGORICAL GENOTYPE EFFECT SIZES, VALUE COUNTS, AND PERCENTAGES

Genotype	Sex	Effect Size	P-Value	Chi-square	n	Absent	As expected	Not as expected

1600014C10Rik^em1(IMPC)J/Mmjax -/-	Female	0%	1	0.00295	8	0% (0/8), r=0	100% (8/8), r=0.00104	0% (0/8), r=-0.0542
1600014C10Rik^em1(IMPC)J/Mmjax -/-	Both	0%	1	0.00204	11	0% (0/11), r=0	100% (11/11), r=0.000612	0% (0/11), r=-0.0451
1600014C10Rik^em1(IMPC)J/Mmjax -/-	Male	0%	1	0	3	0% (0/3), r=0	100% (3/3), r=0	0% (0/3), r=0
1700001O22Rik^em1(IMPC)J -/-	Male	0%	1	0	8	0% (0/8), r=0	100% (8/8), r=0	0% (0/8), r=0
1700001O22Rik^em1(IMPC)J -/-	Both	0%	1	0.00296	16	0% (0/16), r=0	100% (16/16), r=0.000738	0% (0/16), r=-0.0543
1700001O22Rik^em1(IMPC)J -/-	Female	0%	1	0.00295	8	0% (0/8), r=0	100% (8/8), r=0.00104	0% (0/8), r=-0.0542
1700008P02Rik^em1(IMPC)J/Mmjax -/-	Female	0%	1	0.00295	8	0% (0/8), r=0	100% (8/8), r=0.00104	0% (0/8), r=-0.0542
1700008P02Rik^em1(IMPC)J/Mmjax -/-	Both	0%	1	0.00296	16	0% (0/16), r=0	100% (16/16), r=0.000738	0% (0/16), r=-0.0543
1700008P02Rik^em1(IMPC)J/Mmjax -/-	Male	0%	1	0	8	0% (0/8), r=0	100% (8/8), r=0	0% (0/8), r=0
1700016K19Rik^{tm1.1(KOMP)Vlcg} -/-	Male	0%	1	0	8	0% (0/8), r=0	100% (8/8), r=0	0% (0/8), r=0
1700016K19Rik^{tm1.1(KOMP)Vlcg} -/-	Both	0%	1	0.00296	16	0% (0/16), r=0	100% (16/16), r=0.000738	0% (0/16), r=-0.0543
1700016K19Rik^{tm1.1(KOMP)Vlcg} -/-	Female	0%	1	0.00295	8	0% (0/8), r=0	100% (8/8), r=0.00104	0% (0/8), r=-0.0542
1700020N01Rik^em1(IMPC)J/Mmjax -/-	Female	0%	1	0.00258	7	0% (0/7), r=0	100% (7/7), r=0.000972	0% (0/7), r=-0.0507
1700020N01Rik^em1(IMPC)J/Mmjax -/-	Both	0%	1	0.00277	15	0% (0/15), r=0	100% (15/15), r=0.000714	0% (0/15), r=-0.0526
1700020N01Rik^em1(IMPC)J/Mmjax -/-	Male	0%	1	0	8	0% (0/8), r=0	100% (8/8), r=0	0% (0/8), r=0
1700030J22Rik^em1(IMPC)J/Mmjax -/-	Female	0%	1	0.00295	8	0% (0/8), r=0	100% (8/8), r=0.00104	0% (0/8), r=-0.0542
1700030J22Rik^em1(IMPC)J/Mmjax -/-	Both	0%	1	0.00277	15	0% (0/15), r=0	100% (15/15), r=0.000714	0% (0/15), r=-0.0526
1700030J22Rik^em1(IMPC)J/Mmjax -/-	Male	0%	1	0	7	0% (0/7), r=0	100% (7/7), r=0	0% (0/7), r=0
1700088E04Rik^{tm1.1(KOMP)Vlcg} -/-	Male	0%	1	0	8	0% (0/8), r=0	100% (8/8), r=0	0% (0/8), r=0
1700088E04Rik^{tm1.1(KOMP)Vlcg} -/-	Both	0%	1	0.00296	16	0% (0/16), r=0	100% (16/16), r=0.000738	0% (0/16), r=-0.0543
1700088E04Rik^{tm1.1(KOMP)Vlcg} -/-	Female	0%	1	0.00295	8	0% (0/8), r=0	100% (8/8), r=0.00104	0% (0/8), r=-0.0542
1700093K21Rik^em1(IMPC)J/Mmjax -/-	Female	0%	1	0.00295	8	0% (0/8), r=0	100% (8/8), r=0.00104	0% (0/8), r=-0.0542
1700093K21Rik^em1(IMPC)J/Mmjax -/-	Both	0%	1	0.00277	15	0% (0/15), r=0	100% (15/15), r=0.000714	0% (0/15), r=-0.0526
1700093K21Rik^em1(IMPC)J/Mmjax -/-	Male	0%	1	0	7	0% (0/7), r=0	100% (7/7), r=0	0% (0/7), r=0
2610301B20Rik^em1(IMPC)J/Mmjax -/-	Female	0%	1	0.00295	8	0% (0/8), r=0	100% (8/8), r=0.00104	0% (0/8), r=-0.0542
2610301B20Rik^em1(IMPC)J/Mmjax -/-	Both	0%	1	0.00296	16	0% (0/16), r=0	100% (16/16), r=0.000738	0% (0/16), r=-0.0543
2610301B20Rik^em1(IMPC)J/Mmjax -/-	Male	0%	1	0	8	0% (0/8), r=0	100% (8/8), r=0	0% (0/8), r=0
2610507B11Rik^em1(IMPC)J/Mmjax -/+	Male	0%	1	0	8	0% (0/8), r=0	100% (8/8), r=0	0% (0/8), r=0
2610507B11Rik^em1(IMPC)J/Mmjax -/+	Both	0%	1	0.00296	16	0% (0/16), r=0	100% (16/16), r=0.000738	0% (0/16), r=-0.0543
2610507B11Rik^em1(IMPC)J/Mmjax -/+	Female	0%	1	0.00295	8	0% (0/8), r=0	100% (8/8), r=0.00104	0% (0/8), r=-0.0542
4921509C19Rik^{tm1.1(KOMP)Vlcg} -/-	Male	0%	1	0	8	0% (0/8), r=0	100% (8/8), r=0	0% (0/8), r=0
4921509C19Rik^{tm1.1(KOMP)Vlcg} -/-	Both	0%	1	0.00315	17	0% (0/17), r=0	100% (17/17), r=0.00076	0% (0/17), r=-0.056
4921509C19Rik^{tm1.1(KOMP)Vlcg} -/-	Female	0%	1	0.00332	9	0% (0/9), r=0	100% (9/9), r=0.0011	0% (0/9), r=-0.0575
4930432K21Rik^em1(IMPC)J/Mmjax -/-	Male	0%	1	0	8	0% (0/8), r=0	100% (8/8), r=0	0% (0/8), r=0
4930432K21Rik^em1(IMPC)J/Mmjax -/-	Both	0%	1	0.00277	15	0% (0/15), r=0	100% (15/15), r=0.000714	0% (0/15), r=-0.0526
4930432K21Rik^em1(IMPC)J/Mmjax -/-	Female	0%	1	0.00258	7	0% (0/7), r=0	100% (7/7), r=0.000972	0% (0/7), r=-0.0507
4930558K02Rik^em1(IMPC)J/Mmjax -/-	Female	0%	1	0.00295	8	0% (0/8), r=0	100% (8/8), r=0.00104	0% (0/8), r=-0.0542
4930558K02Rik^em1(IMPC)J/Mmjax -/-	Both	0%	1	0.00277	15	0% (0/15), r=0	100% (15/15), r=0.000714	0% (0/15), r=-0.0526
4930558K02Rik^em1(IMPC)J/Mmjax -/-	Male	0%	1	0	7	0% (0/7), r=0	100% (7/7), r=0	0% (0/7), r=0