Shimomura1: Identification of genetic loci that underlie circadian behavior in F2 progeny of BALB/cJ and C57BL/6J strain (2001)

Shimomura K, Low-Zeddies SS, King DP, Steeves TD, Whiteley A, Kushla J, Zemenides PD, Lin A, Vitaterna MH, Churchill GA, Takahashi JS. Genome-wide epistatic interaction analysis reveals complex genetic determinants of circadian behavior in mice. Genome Res. 2001 Jun;11(6):959-80.   PubMed 11381025  


     
Shimomura1 downloads
QTL projects have several available downloads.
Use the QTL Data Downloads button near the bottom of this page.
Participants Kazuhiro Shimomura       University of Texas - Southwestern Dallas, TX
Gary A Churchill       The Jackson Laboratory Bar Harbor, ME
With: Low-Zeddies SS, King DP, Steeves TD, Whiteley A, Kushla J, Zemenides PD, Lin A, Vitaterna MH, Takahashi JS
ContactGary A Churchill     gary.churchill@jax.org
AffiliationChurchill Group QTL Archive
Project type QTL Archive data set
MPD identifiersShimomura1     MPD:117
Data changelog No updates/corrections.       Initial release date: 08/2011.



QTL data set parameters:
Progenitor strains BALB/cJ     C57BL/6J    
Cross direction notation(BALB x B6) F1 x (BALB x B6) F1
Cross typeF2 intercross
Population size 98 ♀     98 ♂


Measured phenotypes:       To access these data use the QTL Data Downloads button at bottom of page.
Data set MPD ID Procedure / Protocol Drug or Challenge Phenotype Measure Panel No. of Strains Sex Age Sample Size (Avg)
Shimomura1 11701 monitoring system (none) phase angle of entrainment   [hour]  phase QTL population both N=98
Shimomura1 11702 monitoring system (none) amplitude of circadian rhythmicity   [hour]  amp QTL population both N=98
Shimomura1 11703 monitoring system (none) circadian activity level   [hour]  act QTL population both N=98
Shimomura1 11704 monitoring system (none) degree of of dissociation of activity fragments (score 0-5)  slop QTL population both N=98



Project / data set:   Shimomura1     a.k.a. Shimomura_2001
Excel file:   Data_Description_BALBxB6_Shimomura2001.xlsx
CSV file:   Shimomura2001_BALBxB6_B37_Data.csv
Readme / text file:   readme_Shimomura2001.txt