Gatti2: QTL mapping of neutrophil counts in Diversity Outbred population (2014)
Gatti DM, Svenson KL, Shabalin A, Wu LY, Valdar W, Simecek P, Goodwin N, Cheng R, Pomp D, Palmer A, Chesler EJ, Broman KW, Churchill GA. Quantitative trait locus mapping methods for diversity outbred mice.
G3 (Bethesda). 2014 Sep 18;4(9):1623-33. doi: 10.1534/g3.114.013748.
Gatti2 downloads
QTL projects have several available downloads.
Use the QTL Data Downloads button near the bottom of this page.
QTL projects have several available downloads.
Use the QTL Data Downloads button near the bottom of this page.
Ontology terms mapped to Gatti2 measures:
| Investigators |
Daniel M Gatti The Jackson Laboratory, Bar Harbor, ME |
| Participants | Svenson KL, Shabalin A, Wu L, Valdar W, Simecek P, Goodwin N, Cheng R, Pomp D, Palmer A, Chesler EJ, Broman K, Churchill GA |
| Contact | Daniel M Gatti Dan.Gatti@jax.org |
| Affiliated Center | QTL Archive |
| Acknowledgements | This work was supported in part by National Institutes of Health grants P50 GM076468 and R01 GM070683 (to GAC), R01 GM074244 (to KWB) and RC1DK087346, DK076050, DK056350 (to DP). |
| QTL Archive data set | |
| MPD identifiers | Gatti2 MPD:289 |
| No updates/corrections. Initial release date: 04/2014. |
Mapping of neutrophil counts in whole blood using 742 JAX Diversity Outbred mice (410 female, 332 male). Males (1025 +/- 427, mean +/- s.d.) had higher mean neutrophil counts than females (838 +/- 422). The trait has an estimated heritability of 0.132.
| Progenitor strains | CC8 founder strains |
| Cross type | Diversity Outbred |
| Population size | 410 ♀ 332 ♂ |
| Age | 10-12wks |
Project / data set: Gatti2 a.k.a. Gatti_2014
Excel file: Data_Description_Gatti_2014.xlsx
CSV file: Gatti_2014_geno.csv
CSV file: Gatti_2014_pheno.csv
Large zipped data set: Gatti_2014.zip