Campbell JH, Foster CM, Vishnivetskaya T, Campbell AG, Yang ZK, Wymore A, Palumbo AV, Chesler EJ, Podar M. Host genetic and environmental effects on mouse intestinal microbiota.
ISME J. 2012 Nov;6(11):2033-44. doi: 10.1038/ismej.2012.54. Epub 2012 Jun 14.
Bubier JA, Philip VM, Quince C, Campbell J, Zhou Y, Vishnivetskaya T, Duvvuru S, Hageman Blair R, Ndukum J, Donohue KD, Foster CM, Mellert DJ, Weinstock G, Culiat CT, O'Hara B, Palumbo AV, Podar M, Chesler EJ. A Microbe Associated with Sleep Revealed by a Novel Systems-Genetic Analysis of the Microbiome in Collaborative Cross Mice.
Genetics. pii: genetics.303013.2019. doi: 10.1534/genetics.119.303013.
| Investigators |
Elissa J Chesler The Jackson Laboratory, Bar Harbor, ME Jason A Bubier The Jackson Laboratory, Bar Harbor, ME Mircea Podar University of Tennessee, Knoxville, TN |
| Participants | Campbell JH, Foster CM, Vishnivetskaya T, Campbell AG, Yang ZK, Wymore A, Palumbo AV |
| Contact | Elissa J Chesler elissa.chesler@jax.org
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| Acknowledgements | Funding provided by NIH HG004857; US Department of Energy Office of Science DE-AC05-00OR22725; Oak Ridge National Laboratory (ORNL) |
| Phenotype archive study | |
| MPD identifiers | Chesler5 MPD:513 |
| No updates/corrections. Initial release date: 05/2018. | |
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• Download the data for 10 inbred strains See also Bubier2 which is a related intestinal microbiome QTL study involving Collaborative Cross lines. (The inbred strains data are available there in an alternative format in the xlsx file, under the "Progenitors" tab) The following additional information is available: • Protocol • Animal documentation The 10 inbred strains are: 129S1/SvImJ A/J C3H/HeJ C57BL/6J CAST/EiJ DBA/2J NOD/ShiLtJ NZO/HlLtJ PWK/PhJ WSB/EiJ Includes all 8 Collaborative Cross founder strains, plus DBA and C3H. (Strain nomenclature of C3H/HeJR and DBA/2JR was submitted; we present these strains as C3H/HeJ and DBA/2J) |