Phenotype measure:   Seburn1   RER_dark

ID, description, units MPD:9216   RER_dark   respiratory exchange ratio, 3 day test   [ratio]  dark
Data set, strains Seburn1   inbred   16 strains     sex: both     age: 7-9wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Seburn1 - respiratory exchange ratio, 3 day test dark



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains14 strains
Mean of the strain means0.789   ratio 0.787   ratio
Median of the strain means0.805   ratio 0.785   ratio
SD of the strain means± 0.0806 ± 0.0944
Coefficient of variation (CV)0.102 0.120
Min–max range of strain means0.675   –   0.889   ratio 0.667   –   0.903   ratio
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0054 0.0054 11.0358 0.0012
strain 8 0.963 0.1204 247.0236 < 0.0001
sex:strain 8 0.0183 0.0023 4.6999 < 0.0001
Residuals 126 0.0614 0.0005


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.706 0.016   8 0.00565 0.0226 0.68, 0.73 -1.03
129S1/SvImJ m 0.704 0.0106   8 0.00375 0.0151 0.69, 0.72 -0.87
A/J f 0.717 0.0276   8 0.00977 0.0385 0.69, 0.78 -0.9
A/J m 0.689 0.0113   8 0.00398 0.0163 0.67, 0.7 -1.03
AKR/J m 0.667 0.0276   8 0.00977 0.0414 0.63, 0.72 -1.27
BALB/cJ f 0.823 0.0212   8 0.0075 0.0258 0.79, 0.85 0.42
BALB/cJ m 0.851 0.027   8 0.00953 0.0317 0.8, 0.88 0.68
BTBR T+ Itpr3tf/J f 0.675 0.0151   8 0.00535 0.0224 0.65, 0.69 -1.42
BTBR T+ Itpr3tf/J m 0.697 0.0287   8 0.0101 0.0411 0.67, 0.75 -0.95
C3H/HeJ m 0.719 0.0136   8 0.00479 0.0189 0.7, 0.74 -0.72
C57BL/6J f 0.75 0.0407   8 0.0144 0.0543 0.71, 0.83 -0.49
CAST/EiJ f 0.805 0.0334   8 0.0118 0.0415 0.77, 0.85 0.19
CAST/EiJ m 0.83 0.02   8 0.00707 0.0241 0.81, 0.86 0.46
CBA/J f 0.706 0.0277   8 0.00981 0.0393 0.66, 0.73 -1.03
FVB/NJ m 0.676 0.0283   8 0.00999 0.0418 0.65, 0.74 -1.17
LP/J f 0.866 0.0277   8 0.00981 0.032 0.82, 0.89 0.95
LP/J m 0.903 0.0205   8 0.00726 0.0227 0.86, 0.93 1.23
NOD/ShiLtJ m 0.871 0.0344   8 0.0122 0.0395 0.83, 0.92 0.89
NZB/BlNJ f 0.869 0.0253   8 0.00895 0.0291 0.84, 0.92 0.99
NZB/BlNJ m 0.895 0.0141   8 0.005 0.0158 0.88, 0.92 1.15
PL/J f 0.877 0.0212   8 0.0075 0.0242 0.85, 0.9 1.09
PL/J m 0.903 0.0139   8 0.00491 0.0154 0.88, 0.93 1.23
SJL/J m 0.741 0.0125   8 0.00441 0.0168 0.72, 0.76 -0.48
SWR/J f 0.889 0.028   8 0.0099 0.0315 0.84, 0.93 1.24
SWR/J m 0.866 0.0177   8 0.00625 0.0204 0.83, 0.89 0.84


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.7062 0.0078 0.7217 0.6908
129S1/SvImJ m 0.7037 0.0078 0.7192 0.6883
A/J f 0.7175 0.0078 0.7329 0.7021
A/J m 0.6887 0.0078 0.7042 0.6733
BALB/cJ f 0.8225 0.0078 0.8379 0.8071
BALB/cJ m 0.8512 0.0078 0.8667 0.8358
BTBR T+ Itpr3tf/J f 0.675 0.0078 0.6904 0.6596
BTBR T+ Itpr3tf/J m 0.6975 0.0078 0.7129 0.6821
CAST/EiJ f 0.805 0.0078 0.8204 0.7896
CAST/EiJ m 0.83 0.0078 0.8454 0.8146
LP/J f 0.8663 0.0078 0.8817 0.8508
LP/J m 0.9025 0.0078 0.9179 0.8871
NZB/BlNJ f 0.8688 0.0078 0.8842 0.8533
NZB/BlNJ m 0.895 0.0078 0.9104 0.8796
PL/J f 0.8775 0.0078 0.8929 0.8621
PL/J m 0.9025 0.0078 0.9179 0.8871
SWR/J f 0.8887 0.0078 0.9042 0.8733
SWR/J m 0.8662 0.0078 0.8817 0.8508


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.705 0.0055 0.7159 0.6941
A/J both 0.7031 0.0055 0.714 0.6922
BALB/cJ both 0.8369 0.0055 0.8478 0.826
BTBR T+ Itpr3tf/J both 0.6862 0.0055 0.6972 0.6753
CAST/EiJ both 0.8175 0.0055 0.8284 0.8066
LP/J both 0.8844 0.0055 0.8953 0.8735
NZB/BlNJ both 0.8819 0.0055 0.8928 0.871
PL/J both 0.89 0.0055 0.9009 0.8791
SWR/J both 0.8775 0.0055 0.8884 0.8666




  GWAS USING LINEAR MIXED MODELS