Project measure / variable:   CSNA03   exploration_wo_gray_in

ID, description, units MPD:90274   exploration_wo_gray_in   percentage of exploration counts in novel zone, excluding center gray zone (novelty preference), founders   [%]  
Data set, strains CSNA03   inbred w/CC8   10 strains     sex: both     age: 12wks
Procedure conditioned place preference test
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of exploration counts in novel zone, excluding center gray zone (novelty preference), founders



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means60.57   % 61.14   %
Median of the strain means61.99   % 61.17   %
SD of the strain means± 6.2703 ± 4.5901
Coefficient of variation (CV)0.1035 0.0751
Min–max range of strain means46.588   –   68.0   % 54.25   –   67.16   %
Mean sample size per strain40.4   mice 39.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1412 0.1412 0.001 0.9751
strain 9 14593.6855 1621.5206 11.2106 < 0.0001
sex:strain 9 1167.9497 129.7722 0.8972 0.5272
Residuals 776 112242.2193 144.642


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 68.0 14.06   42 2.1696 0.2068 44.186, 100.0 1.19
129S1/SvImJ m 67.16 13.34   44 2.0111 0.1986 30.263, 100.0 1.31
A/J f 58.84 12.392   60 1.5997 0.2106 29.545, 88.89 -0.28
A/J m 59.94 14.054   61 1.7994 0.2345 16.162, 85.0 -0.26
C57BL/6J f 54.79 11.42   58 1.4995 0.2084 29.63, 76.32 -0.92
C57BL/6J m 54.75 12.695   55 1.7118 0.2319 31.429, 100.0 -1.39
C57BL/6NJ f 46.588 16.367   9 5.4555 0.3513 16.667, 67.14 -2.23
C57BL/6NJ m 54.25 10.941   10 3.4599 0.2017 33.684, 67.16 -1.5
CAST/EiJ f 58.81 12.706   31 2.282 0.216 12.5, 78.0 -0.28
CAST/EiJ m 63.02 10.226   28 1.9324 0.1622 40.367, 82.09 0.41
DBA/2J f 64.56 10.761   24 2.1966 0.1667 48.889, 91.75 0.64
DBA/2J m 62.13 12.629   23 2.6333 0.2033 35.526, 86.18 0.22
NOD/ShiLtJ f 61.46 8.2653   42 1.2754 0.1345 37.234, 76.4 0.14
NOD/ShiLtJ m 57.93 10.68   39 1.7102 0.1844 18.681, 80.0 -0.7
NZO/HlLtJ f 63.85 12.427   44 1.8734 0.1946 34.615, 90.2 0.52
NZO/HlLtJ m 66.35 12.407   43 1.8921 0.187 38.272, 100.0 1.13
PWK/PhJ f 62.52 10.719   43 1.6346 0.1715 37.838, 88.24 0.31
PWK/PhJ m 60.2 10.62   42 1.6386 0.1764 33.333, 76.47 -0.21
WSB/EiJ f 66.26 9.439   51 1.3217 0.1425 46.341, 85.9 0.91
WSB/EiJ m 65.7 13.378   47 1.9515 0.2036 38.806, 91.92 0.99


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 67.9956904762 1.8557634495 71.6386018722 64.3527790802
129S1/SvImJ m 67.1571363636 1.8130965174 70.7162914742 63.5979812531
A/J f 58.8398833333 1.5526430969 61.8877616786 55.7920049881
A/J m 59.9386721311 1.5398639241 62.9614646313 56.915879631
C57BL/6J f 54.7932758621 1.5791859272 57.8932584661 51.693293258
C57BL/6J m 54.7539636364 1.6216828251 57.9373687442 51.5705585285
C57BL/6NJ f 46.5884444444 4.008907238 54.4580324927 38.7188563962
C57BL/6NJ m 54.2518 3.8031833401 61.7175467439 46.7860532561
CAST/EiJ f 58.8140967742 2.1600629858 63.0543559889 54.5738375595
CAST/EiJ m 63.0244642857 2.2728367673 67.4861013349 58.5628272366
DBA/2J f 64.556625 2.4549442898 69.375743801 59.737506199
DBA/2J m 62.1282608696 2.5077448312 67.0510284918 57.2054932473
NOD/ShiLtJ f 61.4555238095 1.8557634495 65.0984352055 57.8126124135
NOD/ShiLtJ m 57.9293846154 1.9258167444 61.7098124315 54.1489567993
NZO/HlLtJ f 63.8540227273 1.8130965174 67.4131778378 60.2948676167
NZO/HlLtJ m 66.3483953488 1.8340578672 69.9486981282 62.7480925695
PWK/PhJ f 62.5183023256 1.8340578672 66.118605105 58.9179995462
PWK/PhJ m 60.2032857143 1.8557634495 63.8461971103 56.5603743183
WSB/EiJ f 66.2566862745 1.6840778892 69.5625744985 62.9507980505
WSB/EiJ m 65.7027234043 1.7542776605 69.1464155855 62.259031223


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 67.5764134199 1.2972255935 70.1229006347 65.0299262052
A/J both 59.3892777322 1.0933756778 61.5356023178 57.2429531467
C57BL/6J both 54.7736197492 1.1317777363 56.9953285637 52.5519109347
C57BL/6NJ both 50.4201222222 2.7629486405 55.843861488 44.9963829565
CAST/EiJ both 60.91928053 1.5677738256 63.996860885 57.8417001749
DBA/2J both 63.3424429348 1.7546748705 66.7869148493 59.8979710202
NOD/ShiLtJ both 59.6924542125 1.3372198878 62.3174512559 57.067457169
NZO/HlLtJ both 65.1012090381 1.2894850951 67.6325014552 62.5699166209
PWK/PhJ both 61.3607940199 1.3045714086 63.9217012587 58.7998867812
WSB/EiJ both 65.9797048394 1.2158956007 68.3665391858 63.592870493




  GWAS USING LINEAR MIXED MODELS