Project measure / variable:   CSNA03   jump_counts_tot_LD_do

ID, description, units MPD:90240   jump_counts_tot_LD_do   total jump counts, 20 min test (LD box), DO   [n]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means1381.0   n 1117.0   n
Median of the strain means1633.0   n 1276.0   n
SD of the strain means± 821.2 ± 709.3
Coefficient of variation (CV)0.5947 0.6353
Min–max range of strain means173.4   –   2301.0   n 143.4   –   1915.0   n
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 200577584.5929 200577584.5929 714.3442 < 0.0001
strain 8 456369816.777 57046227.0971 203.1665 < 0.0001
sex:strain 8 17259950.6344 2157493.8293 7.6838 < 0.0001
Residuals 3667 1029640934.7349 280785.6381


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 173.4 362.9   49 51.85 2.0927 -1.47
129S1/SvImJ m 143.4 197.3   49 28.179 1.3753 -1.37
A/J f 429.8 597.1   60 77.08 1.3893 -1.16
A/J m 298.4 432.9   61 55.43 1.4507 -1.15
C57BL/6J f 1764.0 424.3   60 54.78 0.2406 507.0, 2691.0 0.47
C57BL/6J m 1468.0 361.5   59 47.063 0.2463 375.0, 2119.0 0.5
CAST/EiJ f 2301.0 548.4   33 95.47 0.2383 458.0, 2963.0 1.12
CAST/EiJ m 1856.0 572.0   30 104.4 0.3082 32.0, 2507.0 1.04
J:DO f 1598.0 601.4   1496 15.549 0.3763 0.26
J:DO m 1072.0 484.6   1403 12.938 0.4522 -0.06
NOD/ShiLtJ f 2156.0 630.4   47 91.95 0.2923 833.0, 4420.0 0.94
NOD/ShiLtJ m 1915.0 413.8   44 62.38 0.2161 1074.0, 2590.0 1.13
NZO/HlLtJ f 395.0 289.6   47 42.237 0.7331 1.0, 1875.0 -1.2
NZO/HlLtJ m 285.1 132.1   46 19.482 0.4635 96.0, 670.0 -1.17
PWK/PhJ f 1633.0 607.2   47 88.57 0.3718 2.0, 3331.0 0.31
PWK/PhJ m 1276.0 428.8   48 61.9 0.3359 3.0, 2395.0 0.22
WSB/EiJ f 1977.0 481.2   55 64.89 0.2434 196.0, 3141.0 0.73
WSB/EiJ m 1735.0 518.4   51 72.59 0.2988 0.87


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 173.4285714284 75.6988714837 321.8446205357 25.0125223211
129S1/SvImJ m 143.4285714284 75.6988714837 291.8446205357 -4.9874776789
A/J f 429.7499999999 68.4087760027 563.8730068505 295.6269931493
A/J m 298.3934426229 67.8457312345 431.4125376405 165.3743476053
C57BL/6J f 1763.6499999998 68.4087760027 1897.7730068504 1629.5269931492
C57BL/6J m 1467.5423728812 68.9860754866 1602.7972395187 1332.2875062437
CAST/EiJ f 2301.3333333333 92.2423747446 2482.1847588769 2120.4819077897
CAST/EiJ m 1856.0333333333 96.7446188084 2045.7119086476 1666.354758019
J:DO f 1598.4498663101 13.7000341068 1625.310305507 1571.5894271133
J:DO m 1071.7726300784 14.1468128946 1099.5090287344 1044.0362314224
NOD/ShiLtJ f 2156.3404255319 77.2927067176 2307.8813657202 2004.7994853436
NOD/ShiLtJ m 1914.7045454545 79.8842398343 2071.3264742859 1758.0826166231
NZO/HlLtJ f 394.9787234043 77.2927067176 546.5196635926 243.437783216
NZO/HlLtJ m 285.0869565217 78.1283278319 438.2662247578 131.9076882856
PWK/PhJ f 1633.0638297872 77.2927067176 1784.6047699755 1481.5228895989
PWK/PhJ m 1276.4583333333 76.4833366998 1426.4124136656 1126.504253001
WSB/EiJ f 1976.7272727273 71.4506362401 2116.8141845809 1836.6403608736
WSB/EiJ m 1734.6470588235 74.1997354854 1880.1238852241 1589.170232423


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 158.4285714284 53.5271853543 263.3745661891 53.4825766677
A/J both 364.0717213114 48.1736543168 458.5215235954 269.6219190274
C57BL/6J both 1615.5961864405 48.5768443943 1710.8364876734 1520.3558852076
CAST/EiJ both 2078.6833333333 66.8359502194 2209.7226404652 1947.6440262014
J:DO both 1335.1112481943 9.8466142608 1354.4166295959 1315.8058667926
NOD/ShiLtJ both 2035.5224854932 55.5779953885 2144.4893212094 1926.555649777
NZO/HlLtJ both 340.032839963 54.9504279363 447.7692599547 232.2964199713
PWK/PhJ both 1454.7610815603 54.3687945987 1561.3571447632 1348.1650183573
WSB/EiJ both 1855.6871657754 51.5043545859 1956.6671760401 1754.7071555106




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA