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Project measure / variable:   CSNA03   pct_jump_time_light_LD_do

ID, description, units MPD:90189   pct_jump_time_light_LD_do   percentage of time jumping in light, 20 min test (LD box), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means38.527   % 37.343   %
Median of the strain means40.339   % 41.437   %
SD of the strain means± 7.7577 ± 10.573
Coefficient of variation (CV)0.2014 0.2831
Min–max range of strain means26.537   –   49.355   % 17.465   –   51.87   %
Mean sample size per strain209.1   mice 197.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 351.0102 351.0102 1.942 0.1635
strain 8 90918.5117 11364.814 62.8777 < 0.0001
sex:strain 8 5398.0676 674.7584 3.7332 0.0002
Residuals 3645 658814.1368 180.7446


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 31.042 32.841   43 5.0082 1.0579 -0.96
129S1/SvImJ m 30.089 29.858   43 4.5533 0.9923 -0.69
A/J f 29.317 35.865   58 4.7093 1.2234 -1.19
A/J m 17.465 25.32   59 3.2964 1.4498 -1.88
C57BL/6J f 42.887 14.338   60 1.851 0.3343 22.175, 100.0 0.56
C57BL/6J m 42.591 8.9152   59 1.1607 0.2093 26.318, 76.28 0.5
CAST/EiJ f 44.379 7.0005   33 1.2186 0.1577 27.743, 65.93 0.75
CAST/EiJ m 43.035 9.2385   30 1.6867 0.2147 4.0, 53.62 0.54
J:DO f 43.182 11.383   1492 0.2947 0.2636 0.6
J:DO m 44.545 12.055   1402 0.32196 0.2706 0.68
NOD/ShiLtJ f 49.355 11.426   47 1.6667 0.2315 2.3742, 69.17 1.4
NOD/ShiLtJ m 51.87 7.3981   44 1.1153 0.1426 41.856, 75.57 1.37
NZO/HlLtJ f 26.537 16.692   47 2.4347 0.629 3.4146, 100.0 -1.55
NZO/HlLtJ m 27.027 12.724   46 1.876 0.4708 0.68415, 52.18 -0.98
PWK/PhJ f 40.339 12.354   47 1.802 0.3062 22.319, 100.0 0.23
PWK/PhJ m 38.032 8.693   48 1.2547 0.2286 0.07
WSB/EiJ f 39.708 6.8507   55 0.92375 0.1725 24.361, 60.49 0.15
WSB/EiJ m 41.437 11.438   50 1.6176 0.276 24.353, 100.0 0.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 31.0424302326 2.0502105346 35.0621038129 27.0227566522
129S1/SvImJ m 30.0889439535 2.0502105346 34.1086175338 26.0692703732
A/J f 29.3168732759 1.7653006931 32.77794834 25.8557982117
A/J m 17.4645305085 1.7502765842 20.8961490789 14.032911938
C57BL/6J f 42.88745 1.7356296607 46.2903515922 39.4845484078
C57BL/6J m 42.5911016949 1.7502765842 46.0227202654 39.1594831245
CAST/EiJ f 44.3792727273 2.3403225571 48.9677442981 39.7908011564
CAST/EiJ m 43.0351333333 2.4545510054 47.8475629164 38.2227037502
J:DO f 43.1821422453 0.3480553205 43.8645447365 42.4997397541
J:DO m 44.5449136947 0.3590531008 45.2488785993 43.8409487902
NOD/ShiLtJ f 49.3550893617 1.9610278414 53.1999100137 45.5102687097
NOD/ShiLtJ m 51.8698863636 2.0267787875 55.8436193085 47.8961534187
NZO/HlLtJ f 26.5366893617 1.9610278414 30.3815100137 22.6918687097
NZO/HlLtJ m 27.027381087 1.9822287585 30.9137685757 23.1409935983
PWK/PhJ f 40.3393617021 1.9610278414 44.1841823541 36.4945410501
PWK/PhJ m 38.03225 1.9404929526 41.8368096404 34.2276903596
WSB/EiJ f 39.7084 1.8128060577 43.2626147957 36.1541852043
WSB/EiJ m 41.43684 1.9012870333 45.164531926 37.709148074


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 30.565687093 1.4497177718 33.4080255398 27.7233486462
A/J both 23.3907018922 1.2429556165 25.8276593504 20.953744434
C57BL/6J both 42.7392758475 1.2324648515 45.1556649541 40.3228867408
CAST/EiJ both 43.7072030303 1.6957247941 47.0318665414 40.3825395192
J:DO both 43.86352797 0.2500308158 44.3537421444 43.3733137957
NOD/ShiLtJ both 50.6124878627 1.4100941855 53.3771397107 47.8478360146
NZO/HlLtJ both 26.7820352243 1.3941718909 29.5154695824 24.0486008663
PWK/PhJ both 39.1858058511 1.3794150113 41.8903076492 36.481304053
WSB/EiJ both 40.57262 1.3135027775 43.1478932821 37.9973467179




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA