Project measure / variable:   CSNA03   center_time_OFT_do

ID, description, units MPD:90126   center_time_OFT_do   time in center, 60 min test (OFT), DO   [s]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means88.96   s 77.32   s
Median of the strain means92.3   s 82.68   s
SD of the strain means± 71.37 ± 60.51
Coefficient of variation (CV)0.8023 0.7826
Min–max range of strain means6.6492   –   215.9   s 7.3209   –   193.7   s
Mean sample size per strain208.1   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 126885.4178 126885.4178 54.1498 < 0.0001
strain 8 3283444.4169 410430.5521 175.1559 < 0.0001
sex:strain 8 54606.2927 6825.7866 2.913 0.0031
Residuals 3626 8496551.2515 2343.2298


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 6.6492 19.319   48 2.7885 2.9055 0.04, 123.0 -1.15
129S1/SvImJ m 10.766 21.366   49 3.0523 1.9845 0.04, 93.68 -1.1
A/J f 16.302 35.792   59 4.6597 2.1956 0.04, 144.4 -1.02
A/J m 18.74 42.597   61 5.454 2.2731 0.08, 245.6 -0.97
C57BL/6J f 92.3 22.859   61 2.9267 0.2476 55.0, 155.9 0.05
C57BL/6J m 91.33 28.909   59 3.7637 0.3165 48.24, 217.9 0.23
CAST/EiJ f 161.4 144.1   33 25.077 0.8924 20.64, 801.5 1.02
CAST/EiJ m 106.2 47.706   30 8.7098 0.4493 55.0, 312.4 0.48
J:DO f 77.7 50.63   1475 1.3182 0.6516 0.08, 605.2 -0.16
J:DO m 65.54 41.028   1383 1.1032 0.626 0.16, 296.2 -0.19
NOD/ShiLtJ f 215.9 109.5   47 15.973 0.5072 130.7, 808.5 1.78
NOD/ShiLtJ m 193.7 62.94   44 9.488 0.3249 93.76, 402.3 1.92
NZO/HlLtJ f 10.547 11.269   47 1.6437 1.0684 0.08, 59.6 -1.1
NZO/HlLtJ m 7.3209 3.56   46 0.52489 0.4863 1.12, 18.5 -1.16
PWK/PhJ f 100.8 29.753   48 4.2944 0.2951 51.4, 210.8 0.17
PWK/PhJ m 82.68 30.338   47 4.4252 0.3669 0.08, 174.0 0.09
WSB/EiJ f 119.0 60.0   55 8.09 0.5042 54.28, 452.9 0.42
WSB/EiJ m 119.6 83.2   52 11.538 0.6955 59.52, 487.9 0.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 6.6491666667 6.9869369169 20.3478840142 -7.0495506808
129S1/SvImJ m 10.766122449 6.9152741311 24.3243364172 -2.7920915192
A/J f 16.3015254237 6.3020440578 28.6574292033 3.9456216442
A/J m 18.7395081967 6.1978708654 30.8911680944 6.5878482991
C57BL/6J f 92.3021311475 6.1978708654 104.4537910452 80.1504712499
C57BL/6J m 91.3294915254 6.3020440578 103.685395305 78.9735877459
CAST/EiJ f 161.4260606061 8.4265629772 177.9473353518 144.9047858603
CAST/EiJ m 106.1793333333 8.8378538101 123.5069924697 88.851674197
J:DO f 77.6976813559 1.2604088116 80.1688621118 75.2265006
J:DO m 65.539978308 1.3016563782 68.0920298036 62.9879268124
NOD/ShiLtJ f 215.8829787234 7.0608748163 229.7266600798 202.039297367
NOD/ShiLtJ m 193.7127272727 7.2976176048 208.0205709054 179.40488364
NZO/HlLtJ f 10.5472340426 7.0608748163 24.390915399 -3.2964473138
NZO/HlLtJ m 7.3208695652 7.1372108166 21.3142166913 -6.6724775609
PWK/PhJ f 100.834375 6.9869369169 114.5330923475 87.1356576525
PWK/PhJ m 82.6829787234 7.0608748163 96.5266600798 68.839297367
WSB/EiJ f 118.9970909091 6.5271876153 131.7944152988 106.1997665194
WSB/EiJ m 119.6325 6.7128318555 132.7938019101 106.4711980899


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 8.7076445578 4.9152391546 18.3445530737 -0.929263958
A/J both 17.5205168102 4.4195407728 26.1855499388 8.8554836816
C57BL/6J both 91.8158113365 4.4195407728 100.4808444651 83.1507782079
CAST/EiJ both 133.8026969697 6.1056249389 145.7734978031 121.8318961363
J:DO both 71.618829832 0.9059442173 73.3950407685 69.8426188954
NOD/ShiLtJ both 204.7978529981 5.0771836651 214.7522729073 194.8434330889
NZO/HlLtJ both 8.9340518039 5.0198538677 18.7760698552 -0.9079662474
PWK/PhJ both 91.7586768617 4.9667202622 101.4965201864 82.020833537
WSB/EiJ both 119.3147954545 4.6815139027 128.493457932 110.1361329771




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA