Phenotype measure:   Peters2   MPV

ID, description, units MPD:6520   MPV   mean platelet volume (MPV)   [fL]
Data set, strains Peters2   AXB BXA   28 strains     sex: both     age: 11wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Peters2 - mean platelet volume (MPV)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means4.65   fL 4.70   fL
Median of the strain means4.50   fL 4.49   fL
SD of the strain means± 0.591 ± 0.742
Coefficient of variation (CV)0.127 0.158
Min–max range of strain means4.19   –   6.79   fL 4.07   –   7.15   fL
Mean sample size per strain7.7   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1265 0.1265 0.0893 0.7653
strain 27 134.9554 4.9983 3.527 < 0.0001
sex:strain 27 60.1127 2.2264 1.571 0.0365
Residuals 391 554.1161 1.4172


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 4.9 0.115   7 0.0436 0.0236 4.7, 5.0 0.42
AXB10/PgnJ m 4.69 0.694   8 0.245 0.148 4.4, 6.4 -0.02
AXB12/PgnJ f 6.79 3.64   10 1.15 0.536 4.5, 13.8 3.62
AXB12/PgnJ m 5.49 2.84   8 1.0 0.517 4.3, 12.5 1.06
AXB13/PgnJ f 4.29 0.113   8 0.0398 0.0263 4.2, 4.5 -0.61
AXB13/PgnJ m 4.31 0.146   8 0.0515 0.0338 4.1, 4.5 -0.53
AXB15/PgnJ f 4.52 0.897   8 0.317 0.198 4.0, 6.7 -0.22
AXB15/PgnJ m 4.33 0.205   8 0.0726 0.0475 4.1, 4.7 -0.5
AXB19a/PgnJ f 4.28 0.0707   8 0.025 0.0165 4.2, 4.4 -0.63
AXB19a/PgnJ m 4.5 0.49   8 0.173 0.109 4.2, 5.7 -0.27
AXB19b/PgnJ f 6.19 3.1   7 1.17 0.501 4.2, 12.7 2.6
AXB19b/PgnJ m 5.05 0.89   8 0.315 0.176 4.2, 6.4 0.47
AXB19/PgnJ f 4.25 0.0756   8 0.0267 0.0178 4.2, 4.4 -0.68
AXB19/PgnJ m 4.17 0.0463   8 0.0164 0.0111 4.1, 4.2 -0.72
AXB1/PgnJ f 4.32 0.192   5 0.086 0.0445 4.1, 4.6 -0.56
AXB1/PgnJ m 4.38 0.0707   8 0.025 0.0162 4.3, 4.5 -0.43
AXB23/PgnJ f 4.7 0.141   5 0.0632 0.0301 4.5, 4.9 0.08
AXB23/PgnJ m 4.67 0.0756   7 0.0286 0.0162 4.6, 4.8 -0.04
AXB24/PgnJ f 4.79 0.639   7 0.241 0.133 4.4, 6.2 0.23
AXB24/PgnJ m 7.15 2.86   8 1.01 0.4 4.3, 12.1 3.3
AXB2/PgnJ f 4.36 0.207   8 0.073 0.0474 4.2, 4.7 -0.49
AXB2/PgnJ m 4.3 0.233   8 0.0824 0.0542 4.1, 4.8 -0.54
AXB4/PgnJ f 4.23 0.151   6 0.0615 0.0356 4.1, 4.5 -0.71
AXB4/PgnJ m 4.18 0.222   9 0.0741 0.0532 3.9, 4.5 -0.7
AXB5/PgnJ f 4.89 0.552   7 0.209 0.113 4.5, 6.1 0.4
AXB5/PgnJ m 6.91 4.38   7 1.66 0.634 4.2, 15.5 2.97
AXB6/PgnJ f 5.47 1.9   7 0.718 0.347 4.3, 8.3 1.38
AXB6/PgnJ m 4.27 0.121   6 0.0494 0.0284 4.1, 4.4 -0.58
AXB8/PgnJ f 4.26 0.346   7 0.131 0.0812 4.0, 4.8 -0.66
AXB8/PgnJ m 4.69 1.21   8 0.427 0.258 4.0, 7.6 -0.02
BXA11/PgnJ f 4.57 0.328   8 0.116 0.0718 4.3, 5.3 -0.14
BXA11/PgnJ m 4.34 0.169   8 0.0596 0.0388 4.2, 4.7 -0.49
BXA12/PgnJ f 4.19 0.0991   8 0.035 0.0237 4.1, 4.4 -0.78
BXA12/PgnJ m 4.17 0.104   8 0.0366 0.0248 4.1, 4.4 -0.72
BXA13/PgnJ f 4.48 0.104   8 0.0366 0.0231 4.3, 4.6 -0.29
BXA13/PgnJ m 4.75 0.665   8 0.235 0.14 4.3, 6.3 0.06
BXA14/PgnJ f 4.3 0.0816   7 0.0309 0.019 4.2, 4.4 -0.59
BXA14/PgnJ m 4.75 1.05   8 0.37 0.221 4.2, 7.3 0.06
BXA16/PgnJ f 4.56 0.233   8 0.0822 0.051 4.4, 5.1 -0.16
BXA16/PgnJ m 4.34 0.0518   8 0.0183 0.0119 4.3, 4.4 -0.49
BXA1/PgnJ f 4.44 0.646   8 0.228 0.146 4.1, 6.0 -0.36
BXA1/PgnJ m 4.07 0.0816   6 0.0333 0.0201 4.0, 4.2 -0.85
BXA24/PgnJ f 4.49 0.217   8 0.0766 0.0483 4.3, 5.0 -0.27
BXA24/PgnJ m 4.56 0.434   8 0.153 0.0951 4.2, 5.3 -0.19
BXA25/PgnJ f 4.61 0.751   8 0.266 0.163 4.2, 6.1 -0.07
BXA25/PgnJ m 4.17 0.104   8 0.0366 0.0248 4.1, 4.4 -0.72
BXA26/PgnJ f 4.63 1.19   9 0.397 0.257 4.1, 7.8 -0.04
BXA26/PgnJ m 4.49 0.219   7 0.0829 0.0489 4.2, 4.7 -0.29
BXA2/PgnJ f 4.56 0.605   8 0.214 0.133 4.2, 6.0 -0.16
BXA2/PgnJ m 5.38 2.07   10 0.654 0.384 4.0, 10.2 0.91
BXA4/PgnJ f 4.26 0.0916   8 0.0324 0.0215 4.1, 4.4 -0.66
BXA4/PgnJ m 4.71 1.37   8 0.485 0.291 4.1, 8.1 0.01
BXA7/PgnJ f 4.33 0.104   8 0.0366 0.0239 4.2, 4.5 -0.54
BXA7/PgnJ m 4.36 0.141   8 0.0498 0.0323 4.2, 4.6 -0.46
BXA8/PgnJ f 4.59 0.367   16 0.0917 0.0799 4.3, 5.7 -0.1
BXA8/PgnJ m 4.48 0.514   15 0.133 0.115 4.2, 6.3 -0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 4.9 0.4499 5.7846 4.0154
AXB10/PgnJ m 4.6875 0.4209 5.515 3.86
AXB12/PgnJ f 6.79 0.3765 7.5301 6.0499
AXB12/PgnJ m 5.4875 0.4209 6.315 4.66
AXB13/PgnJ f 4.2875 0.4209 5.115 3.46
AXB13/PgnJ m 4.3125 0.4209 5.14 3.485
AXB15/PgnJ f 4.525 0.4209 5.3525 3.6975
AXB15/PgnJ m 4.325 0.4209 5.1525 3.4975
AXB19a/PgnJ f 4.275 0.4209 5.1025 3.4475
AXB19a/PgnJ m 4.5 0.4209 5.3275 3.6725
AXB19b/PgnJ f 6.1857 0.4499 7.0703 5.3011
AXB19b/PgnJ m 5.05 0.4209 5.8775 4.2225
AXB19/PgnJ f 4.25 0.4209 5.0775 3.4225
AXB19/PgnJ m 4.175 0.4209 5.0025 3.3475
AXB1/PgnJ f 4.32 0.5324 5.3667 3.2733
AXB1/PgnJ m 4.375 0.4209 5.2025 3.5475
AXB23/PgnJ f 4.7 0.5324 5.7467 3.6533
AXB23/PgnJ m 4.6714 0.4499 5.5561 3.7868
AXB24/PgnJ f 4.7857 0.4499 5.6703 3.9011
AXB24/PgnJ m 7.15 0.4209 7.9775 6.3225
AXB2/PgnJ f 4.3625 0.4209 5.19 3.535
AXB2/PgnJ m 4.3 0.4209 5.1275 3.4725
AXB4/PgnJ f 4.2333 0.486 5.1888 3.2778
AXB4/PgnJ m 4.1778 0.3968 4.9579 3.3976
AXB5/PgnJ f 4.8857 0.4499 5.7703 4.0011
AXB5/PgnJ m 6.9143 0.4499 7.7989 6.0297
AXB6/PgnJ f 5.4714 0.4499 6.3561 4.5868
AXB6/PgnJ m 4.2667 0.486 5.2222 3.3112
AXB8/PgnJ f 4.2571 0.4499 5.1418 3.3725
AXB8/PgnJ m 4.6875 0.4209 5.515 3.86
BXA11/PgnJ f 4.575 0.4209 5.4025 3.7475
BXA11/PgnJ m 4.3375 0.4209 5.165 3.51
BXA12/PgnJ f 4.1875 0.4209 5.015 3.36
BXA12/PgnJ m 4.175 0.4209 5.0025 3.3475
BXA13/PgnJ f 4.475 0.4209 5.3025 3.6475
BXA13/PgnJ m 4.75 0.4209 5.5775 3.9225
BXA14/PgnJ f 4.3 0.4499 5.1846 3.4154
BXA14/PgnJ m 4.75 0.4209 5.5775 3.9225
BXA16/PgnJ f 4.5625 0.4209 5.39 3.735
BXA16/PgnJ m 4.3375 0.4209 5.165 3.51
BXA1/PgnJ f 4.4375 0.4209 5.265 3.61
BXA1/PgnJ m 4.0667 0.486 5.0222 3.1112
BXA24/PgnJ f 4.4875 0.4209 5.315 3.66
BXA24/PgnJ m 4.5625 0.4209 5.39 3.735
BXA25/PgnJ f 4.6125 0.4209 5.44 3.785
BXA25/PgnJ m 4.175 0.4209 5.0025 3.3475
BXA26/PgnJ f 4.6333 0.3968 5.4135 3.8532
BXA26/PgnJ m 4.4857 0.4499 5.3703 3.6011
BXA2/PgnJ f 4.5625 0.4209 5.39 3.735
BXA2/PgnJ m 5.38 0.3765 6.1201 4.6399
BXA4/PgnJ f 4.2625 0.4209 5.09 3.435
BXA4/PgnJ m 4.7125 0.4209 5.54 3.885
BXA7/PgnJ f 4.325 0.4209 5.1525 3.4975
BXA7/PgnJ m 4.3625 0.4209 5.19 3.535
BXA8/PgnJ f 4.5875 0.2976 5.1726 4.0024
BXA8/PgnJ m 4.48 0.3074 5.0843 3.8757


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ both 4.7937 0.3081 5.3994 4.1881
AXB12/PgnJ both 6.1387 0.2823 6.6938 5.5837
AXB13/PgnJ both 4.3 0.2976 4.8851 3.7149
AXB15/PgnJ both 4.425 0.2976 5.0101 3.8399
AXB19a/PgnJ both 4.3875 0.2976 4.9726 3.8024
AXB19b/PgnJ both 5.6179 0.3081 6.2235 5.0122
AXB19/PgnJ both 4.2125 0.2976 4.7976 3.6274
AXB1/PgnJ both 4.3475 0.3393 5.0146 3.6804
AXB23/PgnJ both 4.6857 0.3485 5.3709 4.0005
AXB24/PgnJ both 5.9679 0.3081 6.5735 5.3622
AXB2/PgnJ both 4.3312 0.2976 4.9164 3.7461
AXB4/PgnJ both 4.2056 0.3137 4.8223 3.5888
AXB5/PgnJ both 5.9 0.3182 6.5255 5.2745
AXB6/PgnJ both 4.869 0.3312 5.5201 4.218
AXB8/PgnJ both 4.4723 0.3081 5.078 3.8667
BXA11/PgnJ both 4.4563 0.2976 5.0414 3.8711
BXA12/PgnJ both 4.1812 0.2976 4.7664 3.5961
BXA13/PgnJ both 4.6125 0.2976 5.1976 4.0274
BXA14/PgnJ both 4.525 0.3081 5.1307 3.9193
BXA16/PgnJ both 4.45 0.2976 5.0351 3.8649
BXA1/PgnJ both 4.2521 0.3215 4.8841 3.6201
BXA24/PgnJ both 4.525 0.2976 5.1101 3.9399
BXA25/PgnJ both 4.3937 0.2976 4.9789 3.8086
BXA26/PgnJ both 4.5595 0.3 5.1493 3.9698
BXA2/PgnJ both 4.9712 0.2823 5.5263 4.4162
BXA4/PgnJ both 4.4875 0.2976 5.0726 3.9024
BXA7/PgnJ both 4.3438 0.2976 4.9289 3.7586
BXA8/PgnJ both 4.5337 0.2139 4.9543 4.1132




  GWAS USING LINEAR MIXED MODELS